Gene Expression Data
Assay Details
Assay
|
Reference:
|
J:11921
Sasaki H, et al., Differential expression of multiple fork head related genes during gastrulation and axial pattern formation in the mouse embryo. Development. 1993 May;118(1):47-59
|
Assay type:
|
RNA in situ
|
MGI Accession ID:
|
MGI:1339085
|
Gene symbol:
|
Foxc1
|
Gene name:
|
forkhead box C1
|
Probe:
|
c52
|
Probe preparation:
|
Antisense labelled with digoxigenin RNA
|
Visualized with:
|
Alkaline phosphatase
|
|
Results
|
Specimen
5. A:
embryonic day 6.5
(more )
Note: Mid to late primitive streak stage embryo.
Specimen
5. A:
(close )
Genetic Background:
|
(ICR x Swiss Webster)F1
|
Age:
|
embryonic day 6.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
Mid to late primitive streak stage embryo.
|
Structure |
Level |
Pattern |
Image |
Note |
TS10: embryo |
Trace |
Regionally restricted |
5A
|
Expression is detected in wedge shaped domains on either side of the primitive streak.
|
Specimen
5. C, D:
embryonic day 7.5
(more )
Note: Early head fold stage embryo. Specimens 5. C and 5. D are ventral and frontal views of the same embryo.
Specimen
5. C, D:
(close )
Genetic Background:
|
(ICR x Swiss Webster)F1
|
Age:
|
embryonic day 7.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
Early head fold stage embryo. Specimens 5. C and 5. D are ventral and frontal views of the same embryo.
|
Specimen
5. E:
embryonic day 8.0
(more )
Note: Head fold stage embryo.
Specimen
5. E:
(close )
Genetic Background:
|
(ICR x Swiss Webster)F1
|
Age:
|
embryonic day 8.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
Head fold stage embryo.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: head paraxial mesenchyme |
Present |
Regionally restricted |
5E
|
Expression is detected from the anterior paraxial mesoderm to the middle of the primitive streak.
|
TS12: primitive streak |
Present |
Regionally restricted |
5E
|
Expression is detected from the anterior paraxial mesoderm to the middle of the primitive streak.
|
TS12: trunk paraxial mesenchyme |
Present |
Regionally restricted |
5E
|
Expression is detected from the anterior paraxial mesoderm to the middle of the primitive streak.
|
Specimen
5. F:
embryonic day 8.5
(more )
Specimen
5. F:
(close )
Genetic Background:
|
(ICR x Swiss Webster)F1
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: future brain |
Present |
Regionally restricted |
5F
|
Expression is detected on either side of the midline from head to tail.
|
TS13: neural tube |
Present |
Regionally restricted |
5F
|
Expression is detected on either side of the midline from head to tail.
|
Specimen
5. G:
embryonic day 9.0
(more )
Specimen
5. G:
(close )
Genetic Background:
|
(ICR x Swiss Webster)F1
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: 1st branchial arch |
Present |
Regionally restricted |
5G
|
Expression is detected in neural-crest-derived cells of the first branchial arch and in somitomere-derived cells.
|
TS14: head somite |
Present |
Regionally restricted |
5G
|
Expression is detected in neural-crest-derived cells of the first branchial arch and in somitomere-derived cells.
|
Specimen
5. H:
embryonic day 9.5
(more )
Specimen
5. H:
(close )
Genetic Background:
|
(ICR x Swiss Webster)F1
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: embryo |
Present |
Graded |
5H
|
Expression decreses from anterior to posterior.
|
Specimen
E7.5:
embryonic day 7.5
(more )
Note: Early head fold stage embryo.
Specimen
E7.5:
(close )
Genetic Background:
|
(ICR x Swiss Webster)F1
|
Age:
|
embryonic day 7.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
Early head fold stage embryo.
|
Specimen
6. A:
embryonic day 7.0
(more )
Note: Early head fold stage embryo.
Specimen
6. A:
(close )
Genetic Background:
|
(ICR x Swiss Webster)F1
|
Age:
|
embryonic day 7.0
|
Age Note:
|
Theiler stage of this specimen assigned by curators from EMAGE.
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Note:
|
Early head fold stage embryo.
|
Specimen
6. B:
embryonic day 8.5
(more )
Specimen
6. B:
(close )
Genetic Background:
|
(ICR x Swiss Webster)F1
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
6. C:
embryonic day 9.0
(more )
Specimen
6. C:
(close )
Genetic Background:
|
(ICR x Swiss Webster)F1
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
|