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Gene Expression Data
Assay Details
Assay
Reference: J:30819 Wallin J, et al., Pax1 is expressed during development of the thymus epithelium and is required for normal T-cell maturation. Development. 1996 Jan;122(1):23-30
Assay type: RNA in situ
MGI Accession ID: MGI:1333916
Gene symbol: Pax1
Gene name: paired box 1
Probe: Pax1 probe3
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 2a: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: 1st branchial pouch Present 2a
TS15: 2nd branchial pouch Present 2a
TS15: 3rd branchial pouch Weak 2a
Specimen 2b: embryonic day 9.5 (more )
Note: This specimen is a section of the embryo shown in 2a.
Structure Level Pattern Image Note
TS15: 1st branchial pouch endoderm Present Regionally restricted 2b Expression is in the endodermal epithelium.
TS15: 2nd branchial pouch endoderm Present Regionally restricted 2b Expression is in the endodermal epithelium.
TS15: 3rd branchial pouch endoderm Weak Regionally restricted 2b Expression is in the endodermal epithelium.
Specimen 2c: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS16: 1st branchial pouch Strong 2c
TS16: 2nd branchial pouch Strong 2c
TS16: 3rd branchial pouch Strong 2c
Specimen 2d: embryonic day 10.5 (more )
Note: This is a section from the embryo shown in 2c.
Structure Level Pattern Image Note
TS16: 2nd branchial pouch Present Regionally restricted 2d Expression is in the endodermal epithelium.
TS16: 3rd branchial pouch Strong Regionally restricted 2d Expression is in the endodermal epithelium.
Specimen Not shown: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: foregut diverticulum endoderm Present
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/18/2025
MGI 6.24 		The Jackson Laboratory