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Gene Expression Data
Assay Details
Assay
Reference: J:52751 Tuttle R, et al., Defects in thalamocortical axon pathfinding correlate with altered cell domains in Mash-1-deficient mice. Development. 1999 May;126(9):1903-16
Assay type: RNA in situ
MGI Accession ID: MGI:1333514
Gene symbol: Ascl1
Gene name: achaete-scute family bHLH transcription factor 1
Probe: Mash1 probe4
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 1.A: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: caudal ganglionic eminence Present Regionally restricted 1A Expression was detected in the ventricular zones.
TS21: lateral ganglionic eminence Present Regionally restricted 1A Expression was detected in the ventricular zones.
TS21: medial ganglionic eminence Present Regionally restricted 1A Expression was detected in the ventricular zones.
TS21: prethalamus Present Regionally restricted 1A Expression was detected in the ventricular zones.
TS21: zona limitans intrathalamica Present Regionally restricted 1A Expression was detected in the ventricular zones.
TS21: cerebral cortex Absent 1A
Specimen 1.B: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: hypothalamus Present Regionally restricted 1B
TS21: telencephalon Present Regionally restricted 1B
TS21: cerebral cortex Absent 1B
TS21: thalamus Present Regionally restricted 1B
Specimen 1.C: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: thalamus mantle layer Weak Regionally restricted 1C Weak expression is detected in the mantle zone of the dorsal thalamus.
TS21: caudal ganglionic eminence Present 1C
Specimen 1.C': embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: thalamus Weak Regionally restricted 1C' Expression in present in the xpression in dorsal thalamus, including in the ventricular zone of the zona limitans intrathalamica.
Specimen not shown: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: thalamus mantle layer Absent
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/18/2025
MGI 6.24 		The Jackson Laboratory