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Gene Expression Data
Assay Details
Assay
Reference: J:44237 Goh KL, et al., Mesodermal defects and cranial neural crest apoptosis in alpha5 integrin-null embryos. Development. 1997 Nov;124(21):4309-19
Assay type: RNA in situ
MGI Accession ID: MGI:1331646
Gene symbol: Hoxb9
Gene name: homeobox B9
Probe: Hoxb9 probe2
Assay notes: The fixative used in this assay was 4% paraformaldehyde/0.1% gluteraldehyde.
Results
Specimen 10B wt: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Present Regionally restricted 10B wt Expression was detected in the neural tube posterior to the third somite pair.
TS15: trunk mesenchyme Present Regionally restricted 10B wt Expression was detected in the lateral and somitic mesoderm posterior to the fifth somite pair.
TS15: trunk somite Present Regionally restricted 10B wt Expression was detected in the lateral and somitic mesoderm posterior to the fifth somite pair.

Specimen 10B -/-: embryonic day 9.5; Itga5tm1Hyn/Itga5tm1Hyn (more )
Structure Level Pattern Image Note
TS15: neural tube Weak Regionally restricted 10B -/- Anterior boundaries of expression were normal, but overall the expression level was reduced compared to wild type.
TS15: trunk mesenchyme Weak Regionally restricted 10B -/- Anterior boundaries of expression were normal, but overall the expression level was reduced compared to wild type.
TS15: trunk somite Weak Regionally restricted 10B -/- Anterior boundaries of expression were normal, but overall the expression level was reduced compared to wild type.

Specimen 10C: embryonic day 8.5; Itga5tm1Hyn/Itga5tm1Hyn (more )
Structure Level Pattern Image Note
TS13: neural tube Weak Regionally restricted 10C The overall expression level of mutant embryos was reduced compared to wild type. This reduction in expression was most readily apparent in the posteriormost regions of the mutant in the neural folds and lateral mesoderm.
TS13: trunk mesenchyme Weak Regionally restricted 10C The overall expression level of mutant embryos was reduced compared to wild type. This reduction in expression was most readily apparent in the posteriormost regions of the mutant in the neural folds and lateral mesoderm.
TS13: trunk somite Weak Regionally restricted 10C The overall expression level of mutant embryos was reduced compared to wild type. This reduction in expression was most readily apparent in the posteriormost regions of the mutant in the neural folds and lateral mesoderm.

Specimen 10D: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: neural tube Present Regionally restricted 10D Expression was detected in the neural tube posterior to the third somite pair level.
TS13: trunk mesenchyme Present Regionally restricted 10D Expression was detected in the lateral and somitic mesoderm, posterior to the level of the fifth somite pair.
TS13: trunk somite Present Regionally restricted 10D Expression was detected in the lateral and somitic mesoderm, posterior to the level of the fifth somite pair.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory