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Gene Expression Data
Assay Details
Assay
Reference: J:49164 Ding Q, et al., Diminished Sonic hedgehog signaling and lack of floor plate differentiation in Gli2 mutant mice. Development. 1998 Jul;125(14):2533-43
Assay type: RNA in situ
MGI Accession ID: MGI:1277849
Gene symbol: Ptch1
Gene name: patched 1
Probe: M2-3
Probe preparation: Antisense RNA
Results
Specimen 4A: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: head somite Strong Graded 4A Strong expression could be found in the ventral parts of the somites and neural tube, adjacent to the notochord.
TS13: neural tube Strong Graded 4A Strong expression could be found in the ventral parts of the somites and neural tube, adjacent to the notochord.

Specimen 4B: embryonic day 8.5; Gli2tm1Alj/Gli2tm1Alj (more )
Structure Level Pattern Image Note
TS13: head somite Weak 4B
TS13: neural tube Weak 4B

Specimen 4C: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: head somite Strong Graded 4C Strong expression could be found in the ventral parts of the somites and neural tube, adjacent to the notochord.
TS13: neural tube Strong Graded 4C Strong expression could be found in the ventral parts of the somites and neural tube, adjacent to the notochord.

Specimen 4D: embryonic day 8.5; Gli2tm1Alj/Gli2tm1Alj (more )
Structure Level Pattern Image Note
TS13: head somite Weak 4D
TS13: neural tube Weak 4D

Specimen 4E: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: head somite Strong Graded 4E High levels of expression could be found in the ventral parts of the somites and neural tube, adjacent to the notochord.
TS13: neural tube Strong Graded 4E High levels of expression could be found in the ventral parts of the somites and neural tube, adjacent to the notochord.

Specimen 4F: embryonic day 8.5; Gli2tm1Alj/Gli2tm1Alj (more )
Structure Level Pattern Image Note
TS13: head somite Weak 4F
TS13: neural tube Weak 4F

Specimen 4G: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Present 4G
TS15: tail neural tube Present 4G

Specimen 4H: embryonic day 9.5; Gli2tm1Alj/Gli2tm1Alj (more )
Structure Level Pattern Image Note
TS15: embryo Weak 4H

Specimen 4I: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Present Graded 4I Ventral midline cells have begun to turn off expression.
TS15: tail neural tube Present Graded 4I Ventral midline cells have begun to turn off expression.

Specimen 4J: embryonic day 9.5; Gli2tm1Alj/Gli2tm1Alj (more )
Structure Level Pattern Image Note
TS15: neural tube Present Regionally restricted 4J Ventral midline cells of the mutant neural tube still have a fair amount of expression.
TS15: tail neural tube Present Regionally restricted 4J Ventral midline cells of the mutant neural tube still have a fair amount of expression.

Specimen 4K: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Present Graded 4K Ventral midline cells have begun to turn off expression.
TS15: tail neural tube Present Graded 4K Ventral midline cells have begun to turn off expression.

Specimen 4L: embryonic day 9.5; Gli2tm1Alj/Gli2tm1Alj (more )
Structure Level Pattern Image Note
TS15: neural tube Present Regionally restricted 4L Ventral midline cells of the mutant neural tube still have a fair amount of expression.
TS15: tail neural tube Present Regionally restricted 4L Ventral midline cells of the mutant neural tube still have a fair amount of expression.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/30/2025
MGI 6.24
The Jackson Laboratory