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Table pub.mgd.prb_probe
Defines an accessionable Molecular Segment object. Master table for all Molecular Segments: Single-stranded DNA or RNA molecules of specific base sequence, labeled either radioactively or immunologically, that are used to detect the complementary base sequence by hybridization.

Master for PRB_Marker, PRB_Reference.

Generated by
Primary key columns
Columns with indexes
Implied relationships
Excluded column relationships
< n > number of related tables
Column Type Size Nulls Auto Default Children Parents Comments
_probe_key serial 10  √  nextval('prb_probe_seq'::regclass)
gxd_probeprep._probe_key gxd_probeprep__probe_key_fkey R
mld_contigprobe._probe_key mld_contigprobe__probe_key_fkey R
mld_hit._probe_key mld_hit__probe_key_fkey R
mld_hit._target_key mld_hit__target_key_fkey R
prb_marker._probe_key prb_marker__probe_key_fkey C
prb_notes._probe_key prb_notes__probe_key_fkey C
prb_probe.ampprimer prb_probe_ampprimer_fkey R
prb_probe.derivedfrom prb_probe_derivedfrom_fkey R
prb_reference._probe_key prb_reference__probe_key_fkey C
seq_probe_cache._probe_key seq_probe_cache__probe_key_fkey R
foreign key to PRB_Probe
name text 2147483647 probe name
derivedfrom int4 10  √  null
prb_probe._probe_key prb_probe_derivedfrom_fkey R
foreign key to PRB_Probe; parent
ampprimer int4 10  √  null
prb_probe._probe_key prb_probe_ampprimer_fkey R
foreign key to PRB_Probe; segment type = primer
_source_key int4 10
prb_source._source_key prb_probe__source_key_fkey R
foreign key to PRB_Source
_vector_key int4 10
voc_term._term_key prb_probe__vector_key_fkey R
foreign key to VOC_Term where _Vocab_key = 24 (Segment Vector Type)
_segmenttype_key int4 10
voc_term._term_key prb_probe__segmenttype_key_fkey R
foreign key to VOC_Term where _Vocab_key = 21 (Sequence Type)
primer1sequence text 2147483647  √  null sequence for first primer
primer2sequence text 2147483647  √  null sequence for second primer
regioncovered text 2147483647  √  null notes describing the sequence region where probe hybridizes
insertsite text 2147483647  √  null site of probe on the vector
insertsize text 2147483647  √  null size of probe
productsize text 2147483647  √  null size of probe product
_createdby_key int4 10 1001
mgi_user._user_key prb_probe__createdby_key_fkey R
user who created the record
_modifiedby_key int4 10 1001
mgi_user._user_key prb_probe__modifiedby_key_fkey R
user who last modified the record
creation_date timestamp 29,6 now() date record was created
modification_date timestamp 29,6 now() date record was last modified

Table contained 2,207,657 rows at Mon Sep 11 06:12 EDT 2023

Column(s) Type Sort Constraint Name
_probe_key Primary key, Used to cluster data Asc prb_probe_pkey
_segmenttype_key + _source_key + _probe_key Must be unique Asc/Asc/Asc prb_probe_idx_clustered
ampprimer Performance Asc prb_probe_idx_ampprimer
_createdby_key Performance Asc prb_probe_idx_createdby_key
creation_date Performance Asc prb_probe_idx_creation_date
derivedfrom Performance Asc prb_probe_idx_derivedfrom
modification_date Performance Asc prb_probe_idx_modification_date
_modifiedby_key Performance Asc prb_probe_idx_modifiedby_key
name Performance Asc prb_probe_idx_name
_source_key Performance Asc prb_probe_idx_source_key
_vector_key Performance Asc prb_probe_idx_vector_key

Close relationships  within of separation: