MGI MouseCyc experimental GO annotations for PWY-5328

MGI MouseCyc experimental GO annotations for PWY-5328: superpathway of methionine degradation

Roles of genes might be detected in a summary/comparison table of high level GO categories.
Complete table of the annotations represented in this image is provided below.
Graph is also available as SVG (requires plug-in)

Gray arrows indicate "is_a";
Blue arrows indicate "part_of";
Black arrows indicate "regulates";
Green arrows indicate "positively_regulates";
Red arrows indicate "negatively_regulates"

Compare annotations to GO categories for PWY-5328: superpathway of methionine degradation

Entry indicates that gene is in this pathway.
Colored entries indicate GO annotation.

Category	ID	Term	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Molecular Function	GO:0005488	binding	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Molecular Function	GO:0003824	catalytic activity	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Molecular Function	GO:0030528	transcription regulator activity	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Cellular Component	GO:0005623	cell	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Cellular Component	GO:0044464	cell part	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Cellular Component	GO:0031975	envelope	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Cellular Component	GO:0043226	organelle	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Cellular Component	GO:0044422	organelle part	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Biological Process	GO:0065007	biological regulation	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Biological Process	GO:0009987	cellular process	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Biological Process	GO:0032502	developmental process	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Biological Process	GO:0051179	localization	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Biological Process	GO:0008152	metabolic process	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Biological Process	GO:0032501	multicellular organismal process	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Biological Process	GO:0048519	negative regulation of biological process	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Biological Process	GO:0050789	regulation of biological process	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Biological Process	GO:0000003	reproduction	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox
Biological Process	GO:0022414	reproductive process	Ahcy	Ahcyl1	Ahcyl2	Bhmt	Bhmt2	Cbs	Cdo1	Cth	Dnmt1	Dnmt3a	Dnmt3b	Got1	Got2	Mat1a	Mat2a	Mat2b	Mcee	Mtr	Mut	Pcca	Pccb	Suox

Full set of annotations for PWY-5328: superpathway of methionine degradation

Category	ID	Term	Mouse gene	Evidence	Color Key
Molecular Function	GO:0004013	adenosylhomocysteinase activity	Ahcy	IDA	color key
Molecular Function	GO:0004069	aspartate transaminase activity	Got1	IDA	color key
Molecular Function	GO:0004069	aspartate transaminase activity	Got2	IDA	color key
Molecular Function	GO:0003682	chromatin binding	Dnmt3a	IDA	color key
Molecular Function	GO:0005507	copper ion binding	Ahcy	IDA	color key
Molecular Function	GO:0004123	cystathionine gamma-lyase activity	Cth	IDA	color key
Molecular Function	GO:0003886	DNA (cytosine-5-)-methyltransferase activity	Dnmt1	IDA	color key
Molecular Function	GO:0003886	DNA (cytosine-5-)-methyltransferase activity	Dnmt3a	IDA	color key
Molecular Function	GO:0003886	DNA (cytosine-5-)-methyltransferase activity	Dnmt3a	IGI	color key
Molecular Function	GO:0003886	DNA (cytosine-5-)-methyltransferase activity	Dnmt3b	IDA	color key
Molecular Function	GO:0003886	DNA (cytosine-5-)-methyltransferase activity	Dnmt3b	IGI	color key
Molecular Function	GO:0003677	DNA binding	Dnmt1	IDA	color key
Molecular Function	GO:0003677	DNA binding	Dnmt3a	IDA	color key
Molecular Function	GO:0008898	homocysteine S-methyltransferase activity	Bhmt	IDA	color key
Molecular Function	GO:0004478	methionine adenosyltransferase activity	Mat2a	IDA	color key
Molecular Function	GO:0008705	methionine synthase activity	Mtr	IMP	color key
Molecular Function	GO:0004494	methylmalonyl-CoA mutase activity	Mut	IDA	color key
Molecular Function	GO:0008168	methyltransferase activity	Dnmt1	IDA	color key
Molecular Function	GO:0004609	phosphatidylserine decarboxylase activity	Got1	IDA	color key
Molecular Function	GO:0004658	propionyl-CoA carboxylase activity	Pcca	IMP	color key
Molecular Function	GO:0005515	protein binding	Dnmt1	IPI	color key
Molecular Function	GO:0005515	protein binding	Dnmt3a	IPI	color key
Molecular Function	GO:0005515	protein binding	Dnmt3b	IPI	color key
Molecular Function	GO:0005515	protein binding	Mat2a	IPI	color key
Molecular Function	GO:0043621	protein self-association	Ahcy	IPI	color key
Molecular Function	GO:0016564	transcription repressor activity	Dnmt1	IDA	color key
Molecular Function	GO:0008270	zinc ion binding	Dnmt1	IDA	color key
Cellular Component	GO:0005737	cytoplasm	Dnmt3a	IDA	color key
Cellular Component	GO:0005829	cytosol	Ahcy	IDA	color key
Cellular Component	GO:0005829	cytosol	Cdo1	IDA	color key
Cellular Component	GO:0005829	cytosol	Got1	IDA	color key
Cellular Component	GO:0000792	heterochromatin	Dnmt1	IDA	color key
Cellular Component	GO:0000792	heterochromatin	Dnmt3a	IDA	color key
Cellular Component	GO:0000792	heterochromatin	Dnmt3b	IDA	color key
Cellular Component	GO:0005743	mitochondrial inner membrane	Got2	IDA	color key
Cellular Component	GO:0005739	mitochondrion	Got2	IDA	color key
Cellular Component	GO:0005739	mitochondrion	Mcee	IDA	color key
Cellular Component	GO:0005739	mitochondrion	Mut	IDA	color key
Cellular Component	GO:0005739	mitochondrion	Pcca	IDA	color key
Cellular Component	GO:0005739	mitochondrion	Pccb	IDA	color key
Cellular Component	GO:0005739	mitochondrion	Suox	IDA	color key
Cellular Component	GO:0005720	nuclear heterochromatin	Dnmt3a	IDA	color key
Cellular Component	GO:0005720	nuclear heterochromatin	Dnmt3b	IDA	color key
Cellular Component	GO:0005634	nucleus	Dnmt1	IDA	color key
Cellular Component	GO:0005634	nucleus	Dnmt3a	IDA	color key
Cellular Component	GO:0005634	nucleus	Dnmt3b	IDA	color key
Cellular Component	GO:0005657	replication fork	Dnmt1	IDA	color key
Biological Process	GO:0006532	aspartate biosynthetic process	Got1	IDA	color key
Biological Process	GO:0006532	aspartate biosynthetic process	Got2	IDA	color key
Biological Process	GO:0019344	cysteine biosynthetic process	Cbs	IMP	color key
Biological Process	GO:0006306	DNA methylation	Dnmt1	IDA	color key
Biological Process	GO:0006306	DNA methylation	Dnmt3a	IDA	color key
Biological Process	GO:0006306	DNA methylation	Dnmt3a	IGI	color key
Biological Process	GO:0006306	DNA methylation	Dnmt3b	IGI	color key
Biological Process	GO:0055089	fatty acid homeostasis	Got1	IDA	color key
Biological Process	GO:0016458	gene silencing	Dnmt1	IDA	color key
Biological Process	GO:0006349	genetic imprinting	Dnmt3a	IMP	color key
Biological Process	GO:0006349	genetic imprinting	Dnmt3b	IMP	color key
Biological Process	GO:0019551	glutamate catabolic process to 2-oxoglutarate	Got1	IDA	color key
Biological Process	GO:0019551	glutamate catabolic process to 2-oxoglutarate	Got2	IDA	color key
Biological Process	GO:0019550	glutamate catabolic process to aspartate	Got1	IDA	color key
Biological Process	GO:0019550	glutamate catabolic process to aspartate	Got2	IDA	color key
Biological Process	GO:0006114	glycerol biosynthetic process	Got1	IDA	color key
Biological Process	GO:0009086	methionine biosynthetic process	Bhmt	IDA	color key
Biological Process	GO:0009086	methionine biosynthetic process	Mtr	IMP	color key
Biological Process	GO:0006346	methylation-dependent chromatin silencing	Dnmt3a	IDA	color key
Biological Process	GO:0006346	methylation-dependent chromatin silencing	Dnmt3a	IGI	color key
Biological Process	GO:0006346	methylation-dependent chromatin silencing	Dnmt3b	IGI	color key
Biological Process	GO:0000122	negative regulation of transcription from RNA polymerase II promoter	Dnmt3a	IDA	color key
Biological Process	GO:0045892	negative regulation of transcription, DNA-dependent	Dnmt1	IDA	color key
Biological Process	GO:0045892	negative regulation of transcription, DNA-dependent	Dnmt1	IMP	color key
Biological Process	GO:0006107	oxaloacetate metabolic process	Got1	IDA	color key
Biological Process	GO:0006107	oxaloacetate metabolic process	Got2	IDA	color key
Biological Process	GO:0009791	post-embryonic development	Mut	IMP	color key
Biological Process	GO:0031503	protein complex localization	Dnmt3b	IDA	color key
Biological Process	GO:0042127	regulation of cell proliferation	Dnmt1	IGI	color key
Biological Process	GO:0010468	regulation of gene expression	Dnmt1	IMP	color key
Biological Process	GO:0043506	regulation of JUN kinase activity	Cbs	IMP	color key
Biological Process	GO:0019510	S-adenosylhomocysteine catabolic process	Ahcy	IDA	color key
Biological Process	GO:0006556	S-adenosylmethionine biosynthetic process	Mat2a	IDA	color key
Biological Process	GO:0007283	spermatogenesis	Dnmt3a	IMP	color key