How do I download all phenotype annotations in MGI?
Overview
You can download plain text files from the MGI Data and Statistical Reports page. These files include lists of all genes and markers in MGI, alleles of genes and markers, annotations to genes and alleles and more.
Accessing the MGI Data and Statistical Reports Page
On most MGI pages, you can access the MGI Data and Statistical Reports Page from the Download menu as shown in the image at right.

For this tutorial, open the MGI Data and Statistical Reports Page in a new window. Scroll down this page for further instructions.

Download Menu

Example 1. Downloading all mouse phenotype annotations
  1. Click the link to Alleles and Phenotypes to move down the page.
Reports TOC
  1. Click the link to MGI_PhenotypicAllele.rpt to download a file containing general Mammalian Phenotype terms annotated to alleles. Or, click the link to MGI_PhenoGenoMP.rpt to download a plain text file containing specific Mammalian Phenotype terms annotated to genotypes.
PAD Reports