rs51047944 SNP Detail

Summary

• ID
  rs51047944
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:103652755 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCACACCTT GCTGCTGCCC
  ACCCCATGCT TTAAGGATGT GGAAGGCAGT GGCAAAGCAG CTCTGCTAGT ACAGCTCATG
  TCTGCTCCCT AACAATTGAC GATGGGGGTA ACTGACAGCT AATGAATTTT TGCATGCCGG
  GTACTGGTAT AAACACTTTG CACTCTTTTT CAATAATCCT CACAATCGCT CCTTAAGATG
  Y
  GTAATTTTAT TTTCCCTATG TACAGAGGAG GAAGGGGGCA CAGAGAAGTA GAAAAATCAT
  CCTCCCGTCA CCCAGACCTT CTGCCACCCA AGTCCGGACC CTTCGTTACT GTGCTTTGTT
  GCACCTTGCT GGCTGCAGTG GAAGGGATGT ACGAGGAAGG CCAGCATGGG GTGGCTTCTG
  TAAGAGAGAT ATGGGGCATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147145190	ENSMUSSNP3997448	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs51047944					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:103652755 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dab1	disabled 1			Intron
				Noncoding-Transcript-Variant
Rr596415	regulatory region 596415			1010 bp distal
Rr596416	regulatory region 596416			893 bp proximal