rs32646654 SNP Detail

Summary

• ID
  rs32646654
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150044874 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTCTCCAG AAGCTTCCCT
  GCCCCCATCC TACCCCTGCT CTGGCTCCCA GCTCCCAGCT GCCCTTCTCG GCTTGATCAC
  CCCCCCCCCA TTACACATTC TCCCACCTGG CCCTCCCTCA CAGCCCCCAT GAGAGGCAAT
  CTCGCCACCG ATGGTCTGAA TCTTTGGGTC ATCCTAATCT CACCAGACTT ATATGAAGGG
  Y
  TACGTTGCAT TCCTATTGAT GCCCAAGGCT CACCTGGATC CTTGACACAC GGCATCTCCC
  AGTCACTGCT GTGGAACAAA CTACCCCAAA GAGGCATTAA AGAGCAATTA TTTATCCCCA
  CACACACTAG CCGGGCAGCT GGAGATGAGC TGGTTCTTCT GGCCTTGGGT TCCAGGGCTG
  TCCGAGCCTG ACTCATAGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46709817	NES11013583	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32646654					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46709817	NES11013583	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150044874 () rs orientation: forward

Symbol	Name	Function Class
Rr605123	regulatory region 605123	1357 bp distal
Rr605124	regulatory region 605124	1620 bp distal
Rr605125	regulatory region 605125	533 bp distal