rs31390323 SNP Detail

Summary

• ID
  rs31390323
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143889447 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGATAAAG TGTATTGCTG
  TTAGAAACTG ACAACCTGTG TCCAGAGTTT AGACAGAAAA TGGGACATCA CAGTGCTGGA
  GACAGGAGTG GAAAGAGTGC ACGTATCCAT CCTGTACATA ACTTTTATGT ATTTTTAAAA
  AGATGTATTT ATTTATATTT ATATGCATAC ACTGTAGCTG TCTTCAGACA CATCAGAAGA
  R
  TGCATCGGAC CCCATTACAG ATGGTTGTGA GCCACCATGT GGTCGCTGGG AATTGAACTC
  AGGACCTCTG GAAGAGCAGT CAGTGCTCTT AACTGCTGAG CCATCTCTCC AGCCCACTTT
  TAAACTGTGT GTGCGCGCAC ATGTGTGTGT GTCTGTGTGT CTTTGTGTGT GTGTGTCTGT
  CTGTCTGTCT TTCTGCCTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45529822	mCV23166017	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss136029130	ENSMUSSNP4902053	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs31390323					SNP	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143889447 () rs orientation: forward

Symbol	Name	Function Class
Rr586593	regulatory region 586593	1248 bp distal
Rr586594	regulatory region 586594	1839 bp proximal