rs265827116 SNP Detail

Summary

• ID
  rs265827116
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107601313 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAGAGGGA CTTGTTGAAA
  GGAAAGGAGT TTGAGCCAAG GCTTGCCAGA CCAGTGAGGG TCCGCCACAC TGTACCTTAG
  TCTGCATATG ATTTCCTTGC CTGGCACTTG GTATCCCAGC CACCAGTGCT ACCTCCATGC
  TCCTCCATCT GCGGGACATG GAAGTCATCA CCGTTGGAAA TATTAATGGT TAAGCCTCAT
  C
  GAGCCTCACC TTGTCCAGGC ATGTGCTAAA TACTTTCTTG TATTAACTTG CTTTATAGAT
  GAAGAAACTG AGGCTGAGAA GAGCAAGACT AATAGCCAGC GGGCTAAAGA GATGGTTAAG
  AATACTGACT GCTTTTCTGA AGGTCCTGAG TTCAAATCCC AGCAACCACA TGGTGGCTCA
  CAACCATCTA TAATGGGATC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250726	CHEV_4_107416721	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs265827116					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107601313 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	within coordinates
Rr597058	regulatory region 597058	992 bp proximal