rs212549091 SNP Detail

Summary

• ID
  rs212549091
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:22536750 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTTCAAAT TTTGGGAGGC
  AACCAAGGGC AACTACAGTA GTCTGTATTG TTTGCGCAGC GGGTGTGTGT GTGTGTGTGT
  GTGTCTTGGA CTCTCCTGAC CAATGACTTG AAAAGAGGTT TCTCATGCCT AGTTACTGGG
  GTTTTTGTTG ACTATTAATA TAACTACAGT TGCAATTTTA TTTAAAGTCT ATATTCATAA
  R
  CATATATAAA TATTATATGT AAATCTAGAT AAATATAAAA ATATGATTCC CTGTTTTGTT
  TTTTCAAACA TCCTTGGTGT TAGTGCCCCC CCTCTATTTT CTATACTCAT TCTAATAGTC
  AAAGCCCCCC TCTGTGTCTC TCATTTCCTT CTTCACAGCA TCTGCATACT GCTATTCCTC
  TCTCTAGAGT CCCTTCTCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321765799	CHEV_6_22486751	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs212549091					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:22536750 () rs orientation: forward

Symbol	Name	Function Class
Rr627119	regulatory region 627119	658 bp proximal
Rr627120	regulatory region 627120	714 bp proximal