rs108820352 SNP Detail

Summary

• ID
  rs108820352
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  132
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148333276 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATGTGTGT GCCACCACTG
  CCCAGCTAGG GAAAGGCTTT TAAGTCCTGT TTTGTAGGTG GAGAATATGA GGTCAGAGGG
  AACTGGGGAT CTGATCCATG ACATCAGTCA ACTACACCAA GATCAGGTAA AGGCTGGACC
  CCTGCTTTCC ACACAGAGGC AGCAGGACAT CTTGTCAAGC CTGAGAGGCT AAAGTGCCAG
  A
  TCTCAGGGAA GCCAGGTTAG GGGATATTGC CTGTGTGTAT ACGTATGTAC ATGTTTGTGT
  ACACATGTTC CTGTACCTTC TTTGGCAGAG CCACAGAAGA TGAAGATGAC CGTGGAGAGT
  CTCTTGGCCT TCCTTTATCC CTACAGTTGT TAGAAAGCAT GAAGATGTGC AGTTGGATTG
  GGTGGTGCCT GACACTGTCA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss147998422	ENSMUSSNP1093176	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss321418518	CHEV_4_147622928	CHEVERUD	SCREENING_POP	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs108820352					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148333276 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Disp3	dispatched RND transporter family member 3			Intron
				Noncoding-Transcript-Variant
Rr604634	regulatory region 604634			635 bp proximal
Rr604635	regulatory region 604635			700 bp proximal