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Oxct2a Gene Detail
Summary
  • Symbol
    Oxct2a
  • Name
    3-oxoacid CoA transferase 2A
  • Synonyms
    Oxct2, Scot-t1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1891061
    NCBI Gene: 64059
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:123215668-123217427 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 57.42 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    155 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1891061
 protein coding gene Chr4:123215668-123217472 (-)
129S1/SvImJ ENSMUSG00200011780
 protein coding gene Chr4:116651532-116653291 (-)
A/J ENSMUSG00195028544
 protein coding gene Chr4:117982112-117983871 (-)
AKR/J ENSMUSG00220022054
 protein coding gene Chr4:116950132-116951891 (-)
BALB/cJ ENSMUSG00180037657
 protein coding gene Chr4:115620286-115622045 (-)
C3H/HeJ ENSMUSG00175021006
 protein coding gene Chr4:116633307-116635066 (-)
C57BL/6NJ ENSMUSG00215022612
 protein coding gene Chr4:118127167-118128926 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005045246
 protein coding gene Chr4:117489652-117491411 (-)
CBA/J ENSMUSG00210052188
 protein coding gene Chr4:116239631-116241390 (-)
DBA/2J ENSMUSG00185043840
 protein coding gene Chr4:117794844-117796603 (-)
FVB/NJ ENSMUSG00205018824
 protein coding gene Chr4:116003205-116004964 (-)
JF1/MsJ no annotation
LP/J ENSMUSG00230039537
 protein coding gene Chr4:121589617-121591376 (-)
NOD/ShiLtJ ENSMUSG00190030507
 protein coding gene Chr4:115996834-115998593 (-)
NZO/HlLtJ ENSMUSG00225015672
 protein coding gene Chr4:127497095-127498854 (-)
PWK/PhJ ENSLUMG00010042160
 protein coding gene Chr4:115450152-115451911 (-)
SPRET/EiJ ENSMSPG00010030968
 protein coding gene Chr4:117576828-117578587 (-)
WSB/EiJ ENSIUOG00005042998
 protein coding gene Chr4:115864652-115866411 (-)



Homology
more
  • Human Ortholog
    OXCT2, 3-oxoacid CoA-transferase 2
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OXCT2, 3-oxoacid CoA-transferase 2
  • Synonyms
    FKSG25, SCOTT
  • Links
    NCBI Gene ID: 64064
    UniProt: Q9BYC2

  • Chr Location
    1p34.2; chr1:39769523-39771348 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from multigenic genotypes
    7 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    2
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Oxct2a
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
    20 strains or lines available
Male mice homozygous for a null allele exhibit normal fecundity.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    10
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    701
  • Tissues
    96
  • cDNA Data
    5
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000076436 Ensembl Gene Model | MGI Sequence Detail 1760 C57BL/6J ±  kb
transcript ENSMUST00000102640 Ensembl | MGI Sequence Detail 1760 Not Applicable  
polypeptide ENSMUSP00000099700 Ensembl | MGI Sequence Detail 520 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    Genomic 1
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 38
    Developmental Gene Expression 2
    Gene Ontology 10
    Phenotypes 7
  • Earliest
    J:65840 Koga M, et al., Isolation and characterization of a haploid germ cell-specific novel complementary deoxyribonucleic acid; testis-specific homologue of succinyl CoA:3-Oxo acid CoA transferase. Biol Reprod. 2000 Dec;63(6):1601-9
  • Latest
    J:354849 Wutikeli H, et al., Role of Elavl-like RNA-binding protein in retinal development and signal transduction. Biochim Biophys Acta Mol Basis Dis. 2024 Sep 20;1871(1):167518
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory