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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Hoxb1
homeobox B1
MGI:96182

21 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs27045483
MPD | dbSNP | MGI SNP Detail
Chr11:96363808fAlo1 : within coordinates of
avc6 : within coordinates of
Del(11Chad-Hoxb1)19Brd : within coordinates of
Hoxb1 : Locus-Region
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNPG GGGG GGGGGGGGCGC/G
rs27045482
MPD | dbSNP | MGI SNP Detail
Chr11:96363938fAlo1 : within coordinates of
avc6 : within coordinates of
Del(11Chad-Hoxb1)19Brd : within coordinates of
Hoxb1 : Locus-Region
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNPA AAAA GAAAAAAAAAA/G
rs27045481
MPD | dbSNP | MGI SNP Detail
Chr11:96364076fAlo1 : within coordinates of
avc6 : within coordinates of
Del(11Chad-Hoxb1)19Brd : within coordinates of
Hoxb1 : Locus-Region
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNPC T CC CCCTCCCCTCC/T
rs27045480
MPD | dbSNP | MGI SNP Detail
Chr11:96364723fAlo1 : within coordinates of
avc6 : within coordinates of
Del(11Chad-Hoxb1)19Brd : within coordinates of
Hoxb1 : Locus-Region
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNPC CCCC CCCCCCCCCTC/T
rs27045479
MPD | dbSNP | MGI SNP Detail
Chr11:96365531fAlo1 : within coordinates of
avc6 : within coordinates of
Del(11Chad-Hoxb1)19Brd : within coordinates of
Hoxb1 : Locus-Region
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNPT TTTT TTTTTTTTCTC/T
rs29390493
MPD | dbSNP | MGI SNP Detail
Chr11:96366660fAlo1 : within coordinates of
avc6 : within coordinates of
Del(11Chad-Hoxb1)19Brd : within coordinates of
Hoxb1 : Intron
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
2SNP  C   T T        C/T
rs27045478
MPD | dbSNP | MGI SNP Detail
Chr11:96366760fAlo1 : within coordinates of
avc6 : within coordinates of
Del(11Chad-Hoxb1)19Brd : within coordinates of
Hoxb1 : Intron
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
3SNPG AA GG GGAGGAGA A/G
rs29454163
MPD | dbSNP | MGI SNP Detail
Chr11:96366881fAlo1 : within coordinates of
avc6 : within coordinates of
Del(11Chad-Hoxb1)19Brd : within coordinates of
Hoxb1 : Coding-Synonymous
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
2SNP  A   G G        A/G
rs49496665
MPD | dbSNP | MGI SNP Detail
Chr11:96367543fAlo1 : within coordinates of
avc6 : within coordinates of
Del(11Chad-Hoxb1)19Brd : within coordinates of
Hoxb1 : mRNA-UTR
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNP  C              C
rs49843551
MPD | dbSNP | MGI SNP Detail
Chr11:96367557fAlo1 : within coordinates of
avc6 : within coordinates of
Del(11Chad-Hoxb1)19Brd : within coordinates of
Hoxb1 : mRNA-UTR
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNP  T              T
rs52471782
MPD | dbSNP | MGI SNP Detail
Chr11:96367751fAlo1 : within coordinates of
avc6 : within coordinates of
Del(11Chad-Hoxb1)19Brd : within coordinates of
Hoxb1 : mRNA-UTR
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNP  A              A
rs29385342
MPD | dbSNP | MGI SNP Detail
Chr11:96368514fAlo1 : within coordinates of
avc6 : within coordinates of
Hoxb1 : Locus-Region
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNP AG   A A        A/G
rs27045477
MPD | dbSNP | MGI SNP Detail
Chr11:96368928fAlo1 : within coordinates of
avc6 : within coordinates of
Hoxb1 : 672 bp downstream of
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNPC CCCC GCCCCCCCCGC/G
rs27045476
MPD | dbSNP | MGI SNP Detail
Chr11:96368986fAlo1 : within coordinates of
avc6 : within coordinates of
Hoxb1 : 730 bp downstream of
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNPT TTTT GTTTT TTTTG/T
rs27045475
MPD | dbSNP | MGI SNP Detail
Chr11:96369009fAlo1 : within coordinates of
avc6 : within coordinates of
Hoxb1 : 753 bp downstream of
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNPG GGGG GGGGG GCGGC/G
rs27045474
MPD | dbSNP | MGI SNP Detail
Chr11:96369346fAlo1 : within coordinates of
avc6 : within coordinates of
Hoxb1 : 1090 bp downstream of
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNPG GGGG GGGGGGGGGTG/T
rs29454918
MPD | dbSNP | MGI SNP Detail
Chr11:96369791fAlo1 : within coordinates of
avc6 : within coordinates of
Hoxb1 : 1535 bp downstream of
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNP GA     G        A/G
rs27045473
MPD | dbSNP | MGI SNP Detail
Chr11:96369827fAlo1 : within coordinates of
avc6 : within coordinates of
Hoxb1 : 1571 bp downstream of
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNP  GG G   G   GGGAA/G
rs27045472
MPD | dbSNP | MGI SNP Detail
Chr11:96369964fAlo1 : within coordinates of
avc6 : within coordinates of
Hoxb1 : 1708 bp downstream of
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNP  T      TT   T GG/T
rs27045471
MPD | dbSNP | MGI SNP Detail
Chr11:96370075fAlo1 : within coordinates of
avc6 : within coordinates of
Hoxb1 : 1819 bp downstream of
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNP  GG    GGGG GGGCC/G
rs27045470
MPD | dbSNP | MGI SNP Detail
Chr11:96370243fAlo1 : within coordinates of
avc6 : within coordinates of
Hoxb1 : 1987 bp downstream of
Mhdadsk9 : within coordinates of
nmf9 : within coordinates of
stpm : within coordinates of
1SNPT TTTT ATTTT TTTAA/T

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory