About   Help   FAQ
Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Hoxa11
homeobox A11
MGI:96172

12 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs29923997
MPD | dbSNP | MGI SNP Detail
Chr6:52240253fHdlk : within coordinates of
Hdp1 : within coordinates of
Hoxa10 : Intron
Hoxa11 : 1855 bp downstream of
Sndy1 : within coordinates of
3SNP AC A A A                   C      A/C
rs30904740
MPD | dbSNP | MGI SNP Detail
Chr6:52241653fHdlk : within coordinates of
Hdp1 : within coordinates of
Hoxa10 : Locus-Region
Hoxa11 : Locus-Region
Sndy1 : within coordinates of
3SNPTTC C   T                   C      C/T
rs30071458
MPD | dbSNP | MGI SNP Detail
Chr6:52241774fHdlk : within coordinates of
Hdp1 : within coordinates of
Hoxa10 : Locus-Region
Hoxa11 : Locus-Region
Sndy1 : within coordinates of
3SNP TG G   T                   G      G/T
rs30077847
MPD | dbSNP | MGI SNP Detail
Chr6:52242722fHdlk : within coordinates of
Hdp1 : within coordinates of
Hoxa10 : Locus-Region
Hoxa11 : mRNA-UTR
Sndy1 : within coordinates of
3SNPA C C   A                   C      A/C
rs30668672
MPD | dbSNP | MGI SNP Detail
Chr6:52242723fHdlk : within coordinates of
Hdp1 : within coordinates of
Hoxa10 : Locus-Region
Hoxa11 : mRNA-UTR
Sndy1 : within coordinates of
3SNPC T T   C                   T      C/T
rs3023069
MPD | dbSNP | MGI SNP Detail
Chr6:52243142rHdlk : within coordinates of
Hdp1 : within coordinates of
Hoxa11 : mRNA-UTR
Sndy1 : within coordinates of
5SNPGGTG T TGTTGTTGTTTGTGTTGGTTTTTGGGTGG/T
rs49488379
MPD | dbSNP | MGI SNP Detail
Chr6:52243265fHdlk : within coordinates of
Hdp1 : within coordinates of
Hoxa11 : mRNA-UTR
Hoxa11os : Locus-Region
Sndy1 : within coordinates of
1SNP CC   C                            C
rs52449907
MPD | dbSNP | MGI SNP Detail
Chr6:52244279fHdlk : within coordinates of
Hdp1 : within coordinates of
Hoxa11 : Intron
Hoxa11os : Locus-Region
Sndy1 : within coordinates of
2SNP T    T T                   C      C/T
rs225230886
MPD | dbSNP | MGI SNP Detail
Chr6:52244372fHdlk : within coordinates of
Hdp1 : within coordinates of
Hoxa11 : Intron
Hoxa11os : Locus-Region
Sndy1 : within coordinates of
1SNP        A                   C      A/C
rs30662372
MPD | dbSNP | MGI SNP Detail
Chr6:52246834fHdlk : within coordinates of
Hdp1 : within coordinates of
Hoxa11 : Locus-Region
Hoxa11os : Intron
Sndy1 : within coordinates of
2SNP  G G C                            C/G
rs30014640
MPD | dbSNP | MGI SNP Detail
Chr6:52247341fHdlk : within coordinates of
Hdp1 : within coordinates of
Hoxa11 : Locus-Region
Hoxa11os : Intron
Sndy1 : within coordinates of
3SNP AG G A A                   G      A/G
rs30565002
MPD | dbSNP | MGI SNP Detail
Chr6:52248098fHdlk : within coordinates of
Hdp1 : within coordinates of
Hoxa11 : 1884 bp upstream of
Hoxa11os : Intron
Sndy1 : within coordinates of
3SNPGGA A G G                   A      A/G

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
04/08/2014
MGI 5.17
The Jackson Laboratory