About   Help   FAQ
Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Ift172
intraflagellar transport 172
MGI:2682064

128 matching SNPs displayed
Full result set is also available in a tab-delimited format.
Include SNPs that map to multiple locations

Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs33461312
MPD | dbSNP | MGI SNP Detail
Chr5:31251856f 3SNPG     C   C     CCC  C/G
rs32434954
MPD | dbSNP | MGI SNP Detail
Chr5:31253746f 1SNPT  TTTTTTATTTTT      A/T
rs32434041
MPD | dbSNP | MGI SNP Detail
Chr5:31254158f 1SNPCC CCCCCCAC CCC      A/C
rs32434039
MPD | dbSNP | MGI SNP Detail
Chr5:31254387f 1SNPAA AAAAAGAAAAAA      A/G
rs32434036
MPD | dbSNP | MGI SNP Detail
Chr5:31254895f 1SNPA  AAAAATAA AAA      A/T
rs32433273
MPD | dbSNP | MGI SNP Detail
Chr5:31255222f 1SNPT  TTTTTCTTTTTTT     C/T
rs32433270
MPD | dbSNP | MGI SNP Detail
Chr5:31255538f 1SNPA  AAAAATTA  AA      A/T
rs32433267
MPD | dbSNP | MGI SNP Detail
Chr5:31255613f 1SNPAA AAAAAGAAAAAAA     A/G
rs32433264
MPD | dbSNP | MGI SNP Detail
Chr5:31256435f 1SNPT  TTTTTCCTTTTTT     C/T
rs32432451
MPD | dbSNP | MGI SNP Detail
Chr5:31256783f 1SNPTC TTTTT CTTTTT      C/T
rs32432448
MPD | dbSNP | MGI SNP Detail
Chr5:31256788f 1SNPT  TTTTTC TTTTT      C/T
rs32432445
MPD | dbSNP | MGI SNP Detail
Chr5:31257320f 1SNPCC CCCCCGCCCCCCC     C/G
rs32431692
MPD | dbSNP | MGI SNP Detail
Chr5:31259109f 1SNPCC CCCCCCTCCCCCC     C/T
rs32431689
MPD | dbSNP | MGI SNP Detail
Chr5:31259862f 1SNPAA AAAAAAGAAAAAA     A/G
rs32431686
MPD | dbSNP | MGI SNP Detail
Chr5:31260436f 1SNPGG GGGGGAGGGGGGG     A/G
rs6254142
MPD | dbSNP | MGI SNP Detail
Chr5:31260583f 5SNPT T CCCTC C  CC CCCC C/T
rs6255245
MPD | dbSNP | MGI SNP Detail
Chr5:31260780f 1SNP  G                A A/G
rs6255774
MPD | dbSNP | MGI SNP Detail
Chr5:31260862f 1SNP  G                A A/G
rs6255799
MPD | dbSNP | MGI SNP Detail
Chr5:31260881f 1SNP  T                C C/T
rs32430650
MPD | dbSNP | MGI SNP Detail
Chr5:31261230f 1SNPAG AAAAAGGAAAAAA     A/G
rs29773549
MPD | dbSNP | MGI SNP Detail
Chr5:31262519f 3SNPG G   T         TTT  G/T
rs32430647
MPD | dbSNP | MGI SNP Detail
Chr5:31263250f 1SNPTC TTTTTCCTTTTTT     C/T
rs212800495
MPD | dbSNP | MGI SNP Detail
Chr5:31264134f 1SNP                 AA  A
rs32430644
MPD | dbSNP | MGI SNP Detail
Chr5:31264369f 1SNPGG GGGGGAGG GGGG     A/G
rs32429841
MPD | dbSNP | MGI SNP Detail
Chr5:31264384f 1SNPTC CCCCCCCC CCCC     C/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs32429838
MPD | dbSNP | MGI SNP Detail
Chr5:31264461f 1SNPGG GGGGGAGG GGGG     A/G
rs32429835
MPD | dbSNP | MGI SNP Detail
Chr5:31264525f 1SNPTC TTTTTCCT  TT      C/T
rs32429192
MPD | dbSNP | MGI SNP Detail
Chr5:31264581f 1SNPGA GGGGGAAG GGG      A/G
rs32429189
MPD | dbSNP | MGI SNP Detail
Chr5:31265559f 4SNPGGGAGAAGGGG  AG  AA  A/G
rs32429186
MPD | dbSNP | MGI SNP Detail
Chr5:31265620f 1SNPAA AAAAATAA  AA      A/T
rs32428393
MPD | dbSNP | MGI SNP Detail
Chr5:31266028f 1SNPTC TTTTTCCT TTT      C/T
rs32428390
MPD | dbSNP | MGI SNP Detail
Chr5:31266400f 1SNPCT CCCCCTTC CCC      C/T
rs32428387
MPD | dbSNP | MGI SNP Detail
Chr5:31267382f 1SNPCC CCCCCGCC CCC      C/G
rs32428384
MPD | dbSNP | MGI SNP Detail
Chr5:31267641f 1SNPAA AAAAATAA AAAA     A/T
rs33132490
MPD | dbSNP | MGI SNP Detail
Chr5:31268755f 3SNPT     C          CC  C/T
rs32427641
MPD | dbSNP | MGI SNP Detail
Chr5:31269014f 1SNPCG CCCCCGGC  CCG     C/G
rs32427638
MPD | dbSNP | MGI SNP Detail
Chr5:31270001f 1SNPT   TTTTC T  TT      C/T
rs32427635
MPD | dbSNP | MGI SNP Detail
Chr5:31270127f 1SNPGG GGGGGAGG GGGG     A/G
rs32426882
MPD | dbSNP | MGI SNP Detail
Chr5:31270153f 1SNPGG GGGGGAGG  GGG     A/G
rs33475504
MPD | dbSNP | MGI SNP Detail
Chr5:31271055f 2SNPA A   A   T     T    A/T
rs32426879
MPD | dbSNP | MGI SNP Detail
Chr5:31271631f 1SNPCC CCCCCACC CCC      A/C
rs32426876
MPD | dbSNP | MGI SNP Detail
Chr5:31271858f 1SNPTT TTTTTCTT TTT      C/T
rs29533754
MPD | dbSNP | MGI SNP Detail
Chr5:31271953f 2SNPG     G         C    C/G
rs32426083
MPD | dbSNP | MGI SNP Detail
Chr5:31272495f 1SNPCC CCCCCTCC CCC      C/T
rs32426080
MPD | dbSNP | MGI SNP Detail
Chr5:31272516f 1SNPGG GGGGGAGG GGG      A/G
rs32426077
MPD | dbSNP | MGI SNP Detail
Chr5:31272666f 1SNP   AAAAAGAA AAA      A/G
rs32426074
MPD | dbSNP | MGI SNP Detail
Chr5:31272910f 3SNPGTGGTGGG  T GGT T    G/T
rs32425321
MPD | dbSNP | MGI SNP Detail
Chr5:31273074f 1SNPAG AAAAAGGA AAA      A/G
rs32425318
MPD | dbSNP | MGI SNP Detail
Chr5:31273155f 1SNPAA AAAAAGAA AAA      A/G
rs32425315
MPD | dbSNP | MGI SNP Detail
Chr5:31273240f 1SNPGG GGGGGAGG GGG      A/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs32424592
MPD | dbSNP | MGI SNP Detail
Chr5:31274096f 1SNPA  AAAAAGGA AAA      A/G
rs33531799
MPD | dbSNP | MGI SNP Detail
Chr5:31274390f 3SNPG     A          AA  A/G
rs32424589
MPD | dbSNP | MGI SNP Detail
Chr5:31274645f 1SNPAG AAAAAGGA AAA      A/G
rs52412459
MPD | dbSNP | MGI SNP Detail
Chr5:31275408f 1SNP      G         T    G/T
rs52535809
MPD | dbSNP | MGI SNP Detail
Chr5:31275414f 1SNP      G         T    G/T
rs32424586
MPD | dbSNP | MGI SNP Detail
Chr5:31275784f 1SNPTC TTTTTCCT TTT      C/T
rs32423743
MPD | dbSNP | MGI SNP Detail
Chr5:31276133f 1SNPG  GGGGGAAGGGGGG     A/G
rs33190108
MPD | dbSNP | MGI SNP Detail
Chr5:31276344f 2SNPG G   G         A    A/G
rs32423740
MPD | dbSNP | MGI SNP Detail
Chr5:31276493f 3SNPTCTTCTTTCCCTTTCTC    C/T
rs29520316
MPD | dbSNP | MGI SNP Detail
Chr5:31276759f 3SNPTCTTCTTTCCCTTTCTC    C/T
rs32423735
MPD | dbSNP | MGI SNP Detail
Chr5:31277046f 1SNPAA AAAAAGAAAAAAA     A/G
rs32437100
MPD | dbSNP | MGI SNP Detail
Chr5:31277114f 2SNPAGAAGAAAGGGAAAGAG    A/G
rs32437097
MPD | dbSNP | MGI SNP Detail
Chr5:31277436f 2SNPGG GGGGGAGGGGGGGG   AA/G
rs32437094
MPD | dbSNP | MGI SNP Detail
Chr5:31277624f 2SNPTT TTTTTG  TTT T    GG/T
rs32436221
MPD | dbSNP | MGI SNP Detail
Chr5:31277746f 1SNPCT CCCCCCTCCCCCC     C/T
rs32436218
MPD | dbSNP | MGI SNP Detail
Chr5:31277788f 1SNPTT TTTTTC T  TTT     C/T
rs32436215
MPD | dbSNP | MGI SNP Detail
Chr5:31278379f 1SNPCC CCCCCT CCCCCC     C/T
rs32435272
MPD | dbSNP | MGI SNP Detail
Chr5:31278385f 1SNPGG GGGGGGAGGGGGG     A/G
rs32435269
MPD | dbSNP | MGI SNP Detail
Chr5:31278451f 1SNPA  AAAAATTAAAAAA     A/T
rs33493145
MPD | dbSNP | MGI SNP Detail
Chr5:31278800f 2SNP      T         A    A/T
rs32435267
MPD | dbSNP | MGI SNP Detail
Chr5:31279078f 1SNPCC CCCCCTCCCCCCC     C/T
rs32435265
MPD | dbSNP | MGI SNP Detail
Chr5:31279167f 1SNPTA TTTTTAAT TTT      A/T
rs32434392
MPD | dbSNP | MGI SNP Detail
Chr5:31279316f 1SNPAG AAAAAAGAAAAAA     A/G
rs32434389
MPD | dbSNP | MGI SNP Detail
Chr5:31279550f 1SNPGG GGGGGAGGGGGGG     A/G
rs32434386
MPD | dbSNP | MGI SNP Detail
Chr5:31279583f 1SNPTC   TTTCC   T       C/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs32433683
MPD | dbSNP | MGI SNP Detail
Chr5:31279586f 1SNPG  GAGGGGGA GGAG     A/G
rs32433680
MPD | dbSNP | MGI SNP Detail
Chr5:31279821f 1SNPCC CCCCCTCCCCCCC     C/T
rs32433677
MPD | dbSNP | MGI SNP Detail
Chr5:31279834f 1SNPCC CCCCCTCCCCCCC     C/T
rs32433674
MPD | dbSNP | MGI SNP Detail
Chr5:31279915f 1SNPAG AAAAAGGAAAAAA     A/G
rs32432961
MPD | dbSNP | MGI SNP Detail
Chr5:31279956f 1SNPGG GGGGGAGGGGGGG     A/G
rs32432958
MPD | dbSNP | MGI SNP Detail
Chr5:31280082f 1SNPTA TTTTTAATTTTTT     A/T
rs32432955
MPD | dbSNP | MGI SNP Detail
Chr5:31280930f 1SNPAA AAAAAGGAAAAAA     A/G
rs32432182
MPD | dbSNP | MGI SNP Detail
Chr5:31281078f 1SNPAA ATAAAAATAAATA     A/T
rs32432179
MPD | dbSNP | MGI SNP Detail
Chr5:31281107f 1SNPT  TTTTTCCT TTTT     C/T
rs32432176
MPD | dbSNP | MGI SNP Detail
Chr5:31281313f 1SNPCC CTCCCCCTCCCTC     C/T
rs32431423
MPD | dbSNP | MGI SNP Detail
Chr5:31281334f 1SNPTC TTTTTCCTTTTTT     C/T
rs32431420
MPD | dbSNP | MGI SNP Detail
Chr5:31281383f 1SNPTT TTTTTCTT TTTT     C/T
rs29544580
MPD | dbSNP | MGI SNP Detail
Chr5:31281885f 2SNPA               C    A/C
rs32431417
MPD | dbSNP | MGI SNP Detail
Chr5:31282186f 1SNPGA GGGGGGAGGGGGG     A/G
rs32431414
MPD | dbSNP | MGI SNP Detail
Chr5:31282276f 1SNPGG GAGGGGGAGGGAG     A/G
rs33153872
MPD | dbSNP | MGI SNP Detail
Chr5:31282723f 2SNPC C   C         G    C/G
rs32430741
MPD | dbSNP | MGI SNP Detail
Chr5:31282821f 3SNPGG GAGGGGGAGGGAGA    A/G
rs32430738
MPD | dbSNP | MGI SNP Detail
Chr5:31282869f 1SNPGA GGGGGGAGGGGGG     A/G
rs32430735
MPD | dbSNP | MGI SNP Detail
Chr5:31282976f 2SNPG GGAGGGGGAGGGAGA    A/G
rs32429862
MPD | dbSNP | MGI SNP Detail
Chr5:31283024f 2SNPT TTC TTCCCTTTCTC    C/T
rs48841395
MPD | dbSNP | MGI SNP Detail
Chr5:31283261f 1SNPC     C         A    A/C
rs32429859
MPD | dbSNP | MGI SNP Detail
Chr5:31283277f 1SNPA  AGAAAGGGAAAGA     A/G
rs32429856
MPD | dbSNP | MGI SNP Detail
Chr5:31283567f 2SNPTC TCTTTCCCTTTCTC    C/T
rs32439433
MPD | dbSNP | MGI SNP Detail
Chr5:31284024f 1SNPAA AAAAAGAAAAAAA     A/G
rs32439430
MPD | dbSNP | MGI SNP Detail
Chr5:31284099f 3SNPCCCCTCCCCCTCCCTCT    C/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs32439427
MPD | dbSNP | MGI SNP Detail
Chr5:31284111f 1SNPG  GGGGGGTGGGGGG     G/T
rs32439424
MPD | dbSNP | MGI SNP Detail
Chr5:31284475f 1SNPGG GAGGGGGAGGGAG     A/G
rs32438571
MPD | dbSNP | MGI SNP Detail
Chr5:31284566f 1SNPCC CTCCCCCTCCCTC     C/T
rs32438568
MPD | dbSNP | MGI SNP Detail
Chr5:31285105f 1SNPTC TTTTT CTTTTTT     C/T
rs32438565
MPD | dbSNP | MGI SNP Detail
Chr5:31285390f 1SNPGG GGGGGTGGGGGGG     G/T
rs32437682
MPD | dbSNP | MGI SNP Detail
Chr5:31285544f 1SNPAG AAAAAGGAAAAAA     A/G
rs32437679
MPD | dbSNP | MGI SNP Detail
Chr5:31285581f 1SNPCT CCCCCTTCCCCCC     C/T
rs32437676
MPD | dbSNP | MGI SNP Detail
Chr5:31285632f 2SNPAG AGAAAGGGAAAGA     A/G
rs32436923
MPD | dbSNP | MGI SNP Detail
Chr5:31285656f 3SNPA  AGAAAGGGAAAGAG    A/G
rs32436920
MPD | dbSNP | MGI SNP Detail
Chr5:31285772f 1SNPT  TATTT AATTTAT     A/T
rs32436917
MPD | dbSNP | MGI SNP Detail
Chr5:31285943f 1SNPCA CCCCCAACCCCCC     A/C
rs32436914
MPD | dbSNP | MGI SNP Detail
Chr5:31286206f 1SNPA  AAAAAGGA AAAA     A/G
rs32436001
MPD | dbSNP | MGI SNP Detail
Chr5:31286244f 1SNPAT AAAAATTA AAA      A/T
rs32435998
MPD | dbSNP | MGI SNP Detail
Chr5:31286527f 1SNPTC TTTTTCCTTTTTT     C/T
rs32435995
MPD | dbSNP | MGI SNP Detail
Chr5:31286763f 1SNPGG GGGGGCGGGGGGG     C/G
rs32435092
MPD | dbSNP | MGI SNP Detail
Chr5:31286833f 1SNPT  TTTTTC TTTTTT     C/T
rs32435089
MPD | dbSNP | MGI SNP Detail
Chr5:31287042f 1SNPGG GGGGGAGGGGGGG     A/G
rs32435086
MPD | dbSNP | MGI SNP Detail
Chr5:31287092f 1SNPAG AAAAAGGAAAAAA     A/G
rs32434303
MPD | dbSNP | MGI SNP Detail
Chr5:31287405f 1SNPAG AAAAAGGAAAAA      A/G
rs32434300
MPD | dbSNP | MGI SNP Detail
Chr5:31287422f 1SNPTT TTTTTCTTTTTTT     C/T
rs32434297
MPD | dbSNP | MGI SNP Detail
Chr5:31287518f 1SNPTT TTTTTCTTTTTTT     C/T
rs33347872
MPD | dbSNP | MGI SNP Detail
Chr5:31289221f 2SNPG     A         AAA  A/G
rs49597935
MPD | dbSNP | MGI SNP Detail
Chr5:31289414f 1SNP                 GG  G
rs244430487
MPD | dbSNP | MGI SNP Detail
Chr5:31289421f 1SNP                 GG  G
rs264762524
MPD | dbSNP | MGI SNP Detail
Chr5:31290169f 1SNP                 TT  T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs49811347
MPD | dbSNP | MGI SNP Detail
Chr5:31290643f 1SNPT     T         T   AA/T
rs47618599
MPD | dbSNP | MGI SNP Detail
Chr5:31290723f 1SNPA     A         A   CA/C
rs50134318
MPD | dbSNP | MGI SNP Detail
Chr5:31291196f 1SNP      A             GA/G

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
05/24/2016
MGI 6.04
The Jackson Laboratory