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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Cys1 cystin 1 MGI:2177632 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs29143847 MPD | dbSNP | MGI SNP Detail | Chr12:25348842 | f | Cys1 : Locus-Region | 1 | SNP | T | G | G | G/T | |||||||
| rs29182711 MPD | dbSNP | MGI SNP Detail | Chr12:25348926 | f | Cys1 : Locus-Region | 1 | SNP | A | A | G | A/G | |||||||
| rs29136919 MPD | dbSNP | MGI SNP Detail | Chr12:25348932 | f | Cys1 : Locus-Region | 1 | SNP | C | C | T | C/T | |||||||
| rs29194508 MPD | dbSNP | MGI SNP Detail | Chr12:25349034 | f | Cys1 : Locus-Region | 1 | SNP | A | A | G | A | A/G | ||||||
| rs29204965 MPD | dbSNP | MGI SNP Detail | Chr12:25349847 | f | Cys1 : Locus-Region | 1 | SNP | C | C | A | C | A/C | ||||||
| rs4229262 MPD | dbSNP | MGI SNP Detail | Chr12:25351094 | r | Cys1 : mRNA-UTR Cys1 : Intron | 1 | SNP | G | G | G | G | G | A | G | A/G | |||
| rs4229261 MPD | dbSNP | MGI SNP Detail | Chr12:25351095 | r | Cys1 : Intron Cys1 : mRNA-UTR | 1 | SNP | T | C | C | C | C | C | C | C/T | |||
| rs4229260 MPD | dbSNP | MGI SNP Detail | Chr12:25351097 | r | Cys1 : mRNA-UTR Cys1 : Intron | 1 | SNP | T | C | C | C | C | C | C | C/T | |||
| rs4229259 MPD | dbSNP | MGI SNP Detail | Chr12:25351144 | r | Cys1 : Intron | 1 | SNP | C | T | T | T | C | T | C | T | C/T | ||
| rs4229258 MPD | dbSNP | MGI SNP Detail | Chr12:25351189 | r | Cys1 : Intron | 1 | SNP | G | A | A | A | A | A | A | A | A/G | ||
| rs4229257 MPD | dbSNP | MGI SNP Detail | Chr12:25351282 | r | Cys1 : Intron | 1 | SNP | C | C | C | C | C | C | T | C | C/T | ||
| rs4229256 MPD | dbSNP | MGI SNP Detail | Chr12:25351284 | r | Cys1 : Intron | 1 | SNP | T | C | C | C | C | C | C | C | C/T | ||
| rs4229255 MPD | dbSNP | MGI SNP Detail | Chr12:25351306 | r | Cys1 : Intron | 1 | SNP | T | C | C | C | T | C | T | C | C/T | ||
| rs4229254 MPD | dbSNP | MGI SNP Detail | Chr12:25351341 | r | Cys1 : Intron | 1 | SNP | G | A | A | A | G | A | G | A | A/G | ||
| rs4229253 MPD | dbSNP | MGI SNP Detail | Chr12:25351393 | r | Cys1 : Intron | 1 | SNP | T | C | C | C | T | C | C | C | C/T | ||
| rs4229252 MPD | dbSNP | MGI SNP Detail | Chr12:25351400 | r | Cys1 : Intron | 1 | SNP | C | C | C | C | C | C | A | C | A/C | ||
| rs4229251 MPD | dbSNP | MGI SNP Detail | Chr12:25351411 | r | Cys1 : Intron | 1 | Mixed | - | C | C | C | T | C | C | C | -/C/T | ||
| rs4229250 MPD | dbSNP | MGI SNP Detail | Chr12:25351428 | r | Cys1 : Intron | 1 | SNP | T | G | G | G | T | G | T | G | G/T | ||
| rs29212060 MPD | dbSNP | MGI SNP Detail | Chr12:25352461 | f | Cys1 : Intron | 1 | SNP | G | C | C/G | ||||||||
| rs29199421 MPD | dbSNP | MGI SNP Detail | Chr12:25353209 | f | Cys1 : Intron | 1 | SNP | C | A | A/C | ||||||||
| rs3719364 MPD | dbSNP | MGI SNP Detail | Chr12:25355377 | f | Cys1 : Intron | 1 | SNP | A | G | A/G | ||||||||
| rs3719400 MPD | dbSNP | MGI SNP Detail | Chr12:25355395 | f | Cys1 : Intron | 1 | SNP | A | G | A/G | ||||||||
| rs29133837 MPD | dbSNP | MGI SNP Detail | Chr12:25355435 | f | Cys1 : Intron | 1 | SNP | A | G | A/G | ||||||||
| rs6406760 MPD | dbSNP | MGI SNP Detail | Chr12:25355482 | f | Cys1 : Intron | 1 | SNP | A | G | A/G | ||||||||
| rs3720621 MPD | dbSNP | MGI SNP Detail | Chr12:25355589 | f | Cys1 : Intron | 2 | SNP | G | G | G | A | A/G | ||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | Allele Summary (all strains) |
| rs3720695 MPD | dbSNP | MGI SNP Detail | Chr12:25355628 | f | Cys1 : Intron | 2 | SNP | T | T | T | G | G/T | ||||||
| rs29161163 MPD | dbSNP | MGI SNP Detail | Chr12:25355662 | f | Cys1 : Intron | 1 | SNP | C | C | T | C/T | |||||||
| rs29142310 MPD | dbSNP | MGI SNP Detail | Chr12:25355663 | f | Cys1 : Intron | 1 | SNP | A | A | G | A/G | |||||||
| rs3721240 MPD | dbSNP | MGI SNP Detail | Chr12:25355676 | f | Cys1 : Intron | 2 | SNP | A | A | A | G | A/G | ||||||
| rs29204319 MPD | dbSNP | MGI SNP Detail | Chr12:25355831 | f | Cys1 : Intron | 1 | SNP | G | G | A | G | A/G | ||||||
| rs29178220 MPD | dbSNP | MGI SNP Detail | Chr12:25355833 | f | Cys1 : Intron | 1 | SNP | C | C | T | C | C/T | ||||||
| rs29145693 MPD | dbSNP | MGI SNP Detail | Chr12:25355854 | f | Cys1 : Intron | 1 | SNP | A | A | G | A | A/G | ||||||
| rs29487927 MPD | dbSNP | MGI SNP Detail | Chr12:25355854 | f | Cys1 : Intron | 1 | SNP | A | A | G | A | A/G | ||||||
| rs29183078 MPD | dbSNP | MGI SNP Detail | Chr12:25356003 | f | Cys1 : Intron | 1 | SNP | T | T | C | T | C/T | ||||||
| rs29136061 MPD | dbSNP | MGI SNP Detail | Chr12:25356358 | f | Cys1 : Intron | 1 | SNP | A | G | A/G | ||||||||
| rs29205997 MPD | dbSNP | MGI SNP Detail | Chr12:25356487 | f | Cys1 : Intron | 1 | SNP | T | C | C/T | ||||||||
| rs3666891 MPD | dbSNP | MGI SNP Detail | Chr12:25356545 | f | Cys1 : Intron | 1 | SNP | G | C | C/G | ||||||||
| rs3667585 MPD | dbSNP | MGI SNP Detail | Chr12:25356714 | f | Cys1 : Intron | 1 | SNP | C | G | C/G | ||||||||
| rs4136522 MPD | dbSNP | MGI SNP Detail | Chr12:25356794 | f | Cys1 : Intron | 1 | SNP | G | C | C/G | ||||||||
| rs3668741 MPD | dbSNP | MGI SNP Detail | Chr12:25356846 | f | Cys1 : Intron | 1 | SNP | G | T | G/T | ||||||||
| rs3683688 MPD | dbSNP | MGI SNP Detail | Chr12:25357014 | f | Cys1 : Intron | 1 | SNP | T | G | G/T | ||||||||
| rs3698054 MPD | dbSNP | MGI SNP Detail | Chr12:25360821 | f | Cys1 : Intron | 2 | SNP | G | G | A | A/G | |||||||
| rs3713027 MPD | dbSNP | MGI SNP Detail | Chr12:25360974 | f | Cys1 : Intron | 2 | SNP | T | T | C | T | C/T | ||||||
| rs29128766 MPD | dbSNP | MGI SNP Detail | Chr12:25361376 | f | Cys1 : Intron | 1 | SNP | C | T | C | C/T | |||||||
| rs29165450 MPD | dbSNP | MGI SNP Detail | Chr12:25361378 | f | Cys1 : Intron | 1 | SNP | T | C | T | C/T | |||||||
| rs29491342 MPD | dbSNP | MGI SNP Detail | Chr12:25365108 | f | Cys1 : Intron | 1 | SNP | G | C | C/G | ||||||||
| rs29184004 MPD | dbSNP | MGI SNP Detail | Chr12:25365194 | f | Cys1 : Intron | 1 | SNP | C | T | C/T | ||||||||
| rs29218737 MPD | dbSNP | MGI SNP Detail | Chr12:25366064 | f | Cys1 : mRNA-UTR | 1 | SNP | A | A | G | A | A/G | ||||||
| rs13471152 MPD | dbSNP | MGI SNP Detail | Chr12:25366306 | r | Cys1 : mRNA-UTR | 1 | SNP | T | C | C | C/T | |||||||
| rs13471153 MPD | dbSNP | MGI SNP Detail | Chr12:25366379 | r | Cys1 : mRNA-UTR | 1 | SNP | C | A | C | A/C | |||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | Allele Summary (all strains) |
| rs29148793 MPD | dbSNP | MGI SNP Detail | Chr12:25366470 | f | Cys1 : mRNA-UTR | 1 | SNP | G | G | A | G | A/G | ||||||
| rs29130975 MPD | dbSNP | MGI SNP Detail | Chr12:25366480 | f | Cys1 : mRNA-UTR | 1 | SNP | C | C | A | C | A/C | ||||||
| rs33844159 MPD | dbSNP | MGI SNP Detail | Chr12:25366520 | f | Cys1 : mRNA-UTR | 1 | SNP | C | C | G | C | C/G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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