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Mouse SNPs
Query Results -- Summary
Genome Coordinate Discrepancy
The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details).
 Symbol
Name
ID
Tmc1
transmembrane channel-like gene family 1
MGI:2151016

131 matching SNPs displayed


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs31147358
MPD | dbSNP | MGI SNP Detail
Chr19:20857851fTmc1 : Locus-Region1SNP GG   A                                         A/G
rs31089407
MPD | dbSNP | MGI SNP Detail
Chr19:20857913fTmc1 : Locus-Region1SNP TT   C                                         C/T
rs6171901
MPD | dbSNP | MGI SNP Detail
Chr19:20859204fTmc1 : mRNA-UTR1SNP      G   T                                     G/T
rs6171919
MPD | dbSNP | MGI SNP Detail
Chr19:20859219fTmc1 : mRNA-UTR1SNP      T   C                                     C/T
rs6172448
MPD | dbSNP | MGI SNP Detail
Chr19:20859280fTmc1 : mRNA-UTR1SNP      T   A                                     A/T
rs6172451
MPD | dbSNP | MGI SNP Detail
Chr19:20859284fTmc1 : mRNA-UTR1SNP      G   A                                     A/G
rs6173608
MPD | dbSNP | MGI SNP Detail
Chr19:20859494fTmc1 : mRNA-UTR1SNP      T   C                                     C/T
rs6173651
MPD | dbSNP | MGI SNP Detail
Chr19:20859520fTmc1 : mRNA-UTR1SNP      A   C                                     A/C
rs30850291
MPD | dbSNP | MGI SNP Detail
Chr19:20859947fTmc1 : Intron1SNP AA   T                                         A/T
rs30790476
MPD | dbSNP | MGI SNP Detail
Chr19:20860776fTmc1 : Intron1SNP GG   A    A                                    A/G
rs6360826
MPD | dbSNP | MGI SNP Detail
Chr19:20861760fTmc1 : Intron1SNP      T   G                                     G/T
rs6360828
MPD | dbSNP | MGI SNP Detail
Chr19:20861762fTmc1 : Intron1SNP      T   A                                     A/T
rs6360861
MPD | dbSNP | MGI SNP Detail
Chr19:20861778fTmc1 : Intron1SNP      T   C                                     C/T
rs30324354
MPD | dbSNP | MGI SNP Detail
Chr19:20862297fTmc1 : Intron1SNP AA   G    G                                    A/G
rs30448309
MPD | dbSNP | MGI SNP Detail
Chr19:20862571fTmc1 : Intron1SNP CC   T    T                                    C/T
rs30987187
MPD | dbSNP | MGI SNP Detail
Chr19:20863215fTmc1 : Intron1SNP TT   C    C                                    C/T
rs31149160
MPD | dbSNP | MGI SNP Detail
Chr19:20864747fTmc1 : Intron1SNP  C   T    T                                    C/T
rs30749047
MPD | dbSNP | MGI SNP Detail
Chr19:20867891fTmc1 : Intron1SNP AA   T                                         A/T
rs6208771
MPD | dbSNP | MGI SNP Detail
Chr19:20867933fTmc1 : Intron2SNP CC   T   C                                     C/T
rs6209285
MPD | dbSNP | MGI SNP Detail
Chr19:20868022fTmc1 : Intron1SNP      C   A                                     A/C
rs6209328
MPD | dbSNP | MGI SNP Detail
Chr19:20868048fTmc1 : Intron1SNP      T   C                                     C/T
rs30418439
MPD | dbSNP | MGI SNP Detail
Chr19:20868169fTmc1 : Intron1SNP CC   C    T                                    C/T
rs6222539
MPD | dbSNP | MGI SNP Detail
Chr19:20868178fTmc1 : Intron1SNP      A   G                                     A/G
rs6222555
MPD | dbSNP | MGI SNP Detail
Chr19:20868180fTmc1 : Intron1SNP      G   A                                     A/G
rs6222646
MPD | dbSNP | MGI SNP Detail
Chr19:20868239fTmc1 : Intron1SNP      T   G                                     G/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs30859303
MPD | dbSNP | MGI SNP Detail
Chr19:20868431fTmc1 : Intron1SNP GG        A                                    A/G
rs6223813
MPD | dbSNP | MGI SNP Detail
Chr19:20868443fTmc1 : Intron2SNP CC   T   CT                                    C/T
rs31197337
MPD | dbSNP | MGI SNP Detail
Chr19:20868658fTmc1 : Intron1SNP CC        G                                    C/G
rs30672383
MPD | dbSNP | MGI SNP Detail
Chr19:20868660fTmc1 : Intron1SNP CC        T                                    C/T
rs30947251
MPD | dbSNP | MGI SNP Detail
Chr19:20868778fTmc1 : Intron1SNP CC        G                                    C/G
rs30320637
MPD | dbSNP | MGI SNP Detail
Chr19:20869707fTmc1 : Intron1SNP TT        A                                    A/T
rs30706623
MPD | dbSNP | MGI SNP Detail
Chr19:20869927fTmc1 : Intron1SNP GG        C                                    C/G
rs31080635
MPD | dbSNP | MGI SNP Detail
Chr19:20869955fTmc1 : Intron1SNP CC   T    T                                    C/T
rs30645667
MPD | dbSNP | MGI SNP Detail
Chr19:20869974fTmc1 : Intron1SNP CC   G    G                                    C/G
rs30325489
MPD | dbSNP | MGI SNP Detail
Chr19:20869977fTmc1 : Intron1SNP AA   T    T                                    A/T
rs31229326
MPD | dbSNP | MGI SNP Detail
Chr19:20871787fTmc1 : Intron1SNP GG   A    A                                    A/G
rs31078046
MPD | dbSNP | MGI SNP Detail
Chr19:20871822fTmc1 : Intron1SNPAGG   A    A                                    A/G
rs31130837
MPD | dbSNP | MGI SNP Detail
Chr19:20871927fTmc1 : Intron1SNPGGG   A    G                                    A/G
rs30869425
MPD | dbSNP | MGI SNP Detail
Chr19:20872490fTmc1 : Intron1SNP CC   G    G                                    C/G
rs30398130
MPD | dbSNP | MGI SNP Detail
Chr19:20872492fTmc1 : Intron1SNP AA   C    C                                    A/C
rs13483559
MPD | dbSNP | MGI SNP Detail
Chr19:20872919fTmc1 : Intron2SNPTCCTCTTCTCCTTCTCCTTCCTT TTCC TCTCCCTCCCTCCCCCTCCC/T
rs30667957
MPD | dbSNP | MGI SNP Detail
Chr19:20873022fTmc1 : Intron1SNP CC   T    T                                    C/T
rs30420971
MPD | dbSNP | MGI SNP Detail
Chr19:20873401fTmc1 : Intron1SNP  A   T    T                                    A/T
rs30353492
MPD | dbSNP | MGI SNP Detail
Chr19:20873543fTmc1 : Coding-Synonymous1SNP  T   C    C                                    C/T
rs31158940
MPD | dbSNP | MGI SNP Detail
Chr19:20874025fTmc1 : Intron1SNP TT   C    C                                    C/T
rs30706867
MPD | dbSNP | MGI SNP Detail
Chr19:20874700fTmc1 : Intron1SNP GG   A    A                                    A/G
rs30716898
MPD | dbSNP | MGI SNP Detail
Chr19:20876036fTmc1 : Intron1SNP GG   C    C                                    C/G
rs31147058
MPD | dbSNP | MGI SNP Detail
Chr19:20876237fTmc1 : Intron1SNP GG   A    G                                    A/G
rs31279950
MPD | dbSNP | MGI SNP Detail
Chr19:20878073fTmc1 : Intron1SNPAG         A                                    A/G
rs31301897
MPD | dbSNP | MGI SNP Detail
Chr19:20881602fTmc1 : Intron1SNP  G   A                                         A/G
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs30709213
MPD | dbSNP | MGI SNP Detail
Chr19:20881912fTmc1 : Intron1SNP GG   C                                         C/G
rs31139296
MPD | dbSNP | MGI SNP Detail
Chr19:20881913fTmc1 : Intron1SNP GG   A                                         A/G
rs30413575
MPD | dbSNP | MGI SNP Detail
Chr19:20881948fTmc1 : Intron1SNP CC   T                                         C/T
rs30371127
MPD | dbSNP | MGI SNP Detail
Chr19:20881971fTmc1 : Intron1SNP GG   A                                         A/G
rs30420639
MPD | dbSNP | MGI SNP Detail
Chr19:20881973fTmc1 : Intron1SNP GG   A                                         A/G
rs30850670
MPD | dbSNP | MGI SNP Detail
Chr19:20881975fTmc1 : Intron1SNP CC   G                                         C/G
rs30889165
MPD | dbSNP | MGI SNP Detail
Chr19:20883108fTmc1 : Intron1SNP AA   G                                         A/G
rs30520571
MPD | dbSNP | MGI SNP Detail
Chr19:20883121fTmc1 : Intron1SNP GG   T                                         G/T
rs30649173
MPD | dbSNP | MGI SNP Detail
Chr19:20883131fTmc1 : Intron1SNP CC   G                                         C/G
rs30849138
MPD | dbSNP | MGI SNP Detail
Chr19:20883223fTmc1 : Intron1SNPA     G    A                                    A/G
rs30354633
MPD | dbSNP | MGI SNP Detail
Chr19:20883321fTmc1 : Intron1SNP TT   C                                         C/T
rs30802864
MPD | dbSNP | MGI SNP Detail
Chr19:20883346fTmc1 : Intron1SNP GG   A                                         A/G
rs30647256
MPD | dbSNP | MGI SNP Detail
Chr19:20883530fTmc1 : Intron1SNP  A   T                                         A/T
rs31005915
MPD | dbSNP | MGI SNP Detail
Chr19:20888138fTmc1 : Intron1SNP TT        C                                    C/T
rs31293573
MPD | dbSNP | MGI SNP Detail
Chr19:20888140fTmc1 : Intron1SNP AA        G                                    A/G
rs30402624
MPD | dbSNP | MGI SNP Detail
Chr19:20888191fTmc1 : Intron1SNP GG        T                                    G/T
rs30506490
MPD | dbSNP | MGI SNP Detail
Chr19:20888201fTmc1 : Intron1SNP AA        G                                    A/G
rs30498949
MPD | dbSNP | MGI SNP Detail
Chr19:20890007fTmc1 : Intron1SNP GG   A    A                                    A/G
rs30967445
MPD | dbSNP | MGI SNP Detail
Chr19:20891735fTmc1 : Intron1SNP GG   A    A                                    A/G
rs30566190
MPD | dbSNP | MGI SNP Detail
Chr19:20891774fTmc1 : Intron1SNP CC   G    G                                    C/G
rs30524213
MPD | dbSNP | MGI SNP Detail
Chr19:20891779fTmc1 : Intron1SNP GG   T    T                                    G/T
rs31026217
MPD | dbSNP | MGI SNP Detail
Chr19:20891862fTmc1 : Intron1SNP AA   G    G                                    A/G
rs31175378
MPD | dbSNP | MGI SNP Detail
Chr19:20891999fTmc1 : Intron1SNP GG   T    T                                    G/T
rs30759098
MPD | dbSNP | MGI SNP Detail
Chr19:20892080fTmc1 : Intron1SNP  A   G    G                                    A/G
rs30654050
MPD | dbSNP | MGI SNP Detail
Chr19:20892121fTmc1 : Intron1SNP  A   G    G                                    A/G
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs30317762
MPD | dbSNP | MGI SNP Detail
Chr19:20892312fTmc1 : Intron1SNP  A   G    G                                    A/G
rs30967197
MPD | dbSNP | MGI SNP Detail
Chr19:20892340fTmc1 : Intron1SNP  G   A    A                                    A/G
rs30555930
MPD | dbSNP | MGI SNP Detail
Chr19:20892372fTmc1 : Intron1SNP  C   A    A                                    A/C
rs30950624
MPD | dbSNP | MGI SNP Detail
Chr19:20892380fTmc1 : Intron1SNP  G   A    A                                    A/G
rs30849884
MPD | dbSNP | MGI SNP Detail
Chr19:20892429fTmc1 : Intron1SNP  G   T    T                                    G/T
rs33859347
MPD | dbSNP | MGI SNP Detail
Chr19:20892624fTmc1 : Intron1SNP TT   A    A                                    A/T
rs30414759
MPD | dbSNP | MGI SNP Detail
Chr19:20892646fTmc1 : Intron1SNP GG   A    A                                    A/G
rs31224112
MPD | dbSNP | MGI SNP Detail
Chr19:20892689fTmc1 : Intron1SNP TT   G    G                                    G/T
rs30354567
MPD | dbSNP | MGI SNP Detail
Chr19:20892984fTmc1 : Intron1SNP TT   A    A                                    A/T
rs30459393
MPD | dbSNP | MGI SNP Detail
Chr19:20893063fTmc1 : Intron1SNP CC   T    C                                    C/T
rs31004182
MPD | dbSNP | MGI SNP Detail
Chr19:20893566fTmc1 : Intron1SNP GG   T    T                                    G/T
rs31237389
MPD | dbSNP | MGI SNP Detail
Chr19:20893750fTmc1 : Intron1SNP TC   T    T                                    C/T
rs30661104
MPD | dbSNP | MGI SNP Detail
Chr19:20895024fTmc1 : Intron1SNPTCC   T    T                                    C/T
rs30712671
MPD | dbSNP | MGI SNP Detail
Chr19:20895036fTmc1 : Intron1SNPTGG   T    T                                    G/T
rs30985283
MPD | dbSNP | MGI SNP Detail
Chr19:20895334fTmc1 : Intron1SNP GG   T    T                                    G/T
rs30497718
MPD | dbSNP | MGI SNP Detail
Chr19:20895688fTmc1 : Intron1SNP  T   C    C                                    C/T
rs30420643
MPD | dbSNP | MGI SNP Detail
Chr19:20896773fTmc1 : Intron1SNPC T   C    C                                    C/T
rs30852452
MPD | dbSNP | MGI SNP Detail
Chr19:20896867fTmc1 : Intron1SNPT C   T    T                                    C/T
rs31154775
MPD | dbSNP | MGI SNP Detail
Chr19:20897884fTmc1 : Intron1SNP TT   C    C                                    C/T
rs30403181
MPD | dbSNP | MGI SNP Detail
Chr19:20898612fTmc1 : Coding-Synonymous1SNP AA   G    G                                    A/G
rs30808688
MPD | dbSNP | MGI SNP Detail
Chr19:20899089fTmc1 : Intron1SNPAGA   A    A                                    A/G
rs30327022
MPD | dbSNP | MGI SNP Detail
Chr19:20902025fTmc1 : Intron1SNPGAG   G    G                                    A/G
rs31186607
MPD | dbSNP | MGI SNP Detail
Chr19:20902031fTmc1 : Intron1SNPCTC   C    C                                    C/T
rs30312884
MPD | dbSNP | MGI SNP Detail
Chr19:20904481fTmc1 : Intron1SNP  C   T    C                                    C/T
rs30405710
MPD | dbSNP | MGI SNP Detail
Chr19:20905931fTmc1 : Intron1SNP CT   T    T                                    C/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs31028970
MPD | dbSNP | MGI SNP Detail
Chr19:20906152fTmc1 : Intron1SNP GA        A                                    A/G
rs30365505
MPD | dbSNP | MGI SNP Detail
Chr19:20908068fTmc1 : Intron1SNP CC        A                                    A/C
rs31058567
MPD | dbSNP | MGI SNP Detail
Chr19:20909625fTmc1 : Intron1SNPGCC   G    G                                    C/G
rs30764796
MPD | dbSNP | MGI SNP Detail
Chr19:20909665fTmc1 : Intron1SNPAGG   A    A                                    A/G
rs31238970
MPD | dbSNP | MGI SNP Detail
Chr19:20909759fTmc1 : Intron1SNPTCT   T    T                                    C/T
rs30320430
MPD | dbSNP | MGI SNP Detail
Chr19:20913429fTmc1 : Intron1SNPCCC   T    C                                    C/T
rs30990684
MPD | dbSNP | MGI SNP Detail
Chr19:20915767fTmc1 : Intron1SNP  C   T    C                                    C/T
rs30419576
MPD | dbSNP | MGI SNP Detail
Chr19:20945419fTmc1 : Intron1SNP TG   G    G                                    G/T
rs6215093
MPD | dbSNP | MGI SNP Detail
Chr19:20952718fTmc1 : Intron1SNP      C   A                                     A/C
rs6215129
MPD | dbSNP | MGI SNP Detail
Chr19:20952737fTmc1 : Intron1SNP      C   T                                     C/T
rs6215130
MPD | dbSNP | MGI SNP Detail
Chr19:20952738fTmc1 : Intron1SNP      T   G                                     G/T
rs6215555
MPD | dbSNP | MGI SNP Detail
Chr19:20952768fTmc1 : Intron1SNP      G   T                                     G/T
rs6215559
MPD | dbSNP | MGI SNP Detail
Chr19:20952771fTmc1 : Intron1SNP      A   G                                     A/G
rs6215714
MPD | dbSNP | MGI SNP Detail
Chr19:20952853fTmc1 : Intron1SNP      C   T                                     C/T
rs6215730
MPD | dbSNP | MGI SNP Detail
Chr19:20952861fTmc1 : Intron1SNP      T   G                                     G/T
rs6215735
MPD | dbSNP | MGI SNP Detail
Chr19:20952864fTmc1 : Intron1SNP      T   G                                     G/T
rs6216814
MPD | dbSNP | MGI SNP Detail
Chr19:20953034fTmc1 : Intron1SNP      G   T                                     G/T
rs6218380
MPD | dbSNP | MGI SNP Detail
Chr19:20953281fTmc1 : Intron1SNP      T   C                                     C/T
rs6218395
MPD | dbSNP | MGI SNP Detail
Chr19:20953288fTmc1 : Intron1SNP      G   T                                     G/T
rs6218398
MPD | dbSNP | MGI SNP Detail
Chr19:20953294fTmc1 : Intron1SNP      A   G                                     A/G
rs6357708
MPD | dbSNP | MGI SNP Detail
Chr19:20960627fTmc1 : Intron1SNP      C   T                                     C/T
rs30318812
MPD | dbSNP | MGI SNP Detail
Chr19:20965592fTmc1 : Intron1SNPAAG   G    A                                    A/G
rs30996833
MPD | dbSNP | MGI SNP Detail
Chr19:20965688fTmc1 : Intron1SNPAAG   A    A                                    A/G
rs31289940
MPD | dbSNP | MGI SNP Detail
Chr19:20972260fTmc1 : Intron1SNP      G    T                                    G/T
rs31099958
MPD | dbSNP | MGI SNP Detail
Chr19:20993822fTmc1 : Intron1SNP C    T    C                                    C/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs30318457
MPD | dbSNP | MGI SNP Detail
Chr19:20993828fTmc1 : Intron1SNP C    T    C                                    C/T
rs30367258
MPD | dbSNP | MGI SNP Detail
Chr19:20993832fTmc1 : Intron1SNP C    T    C                                    C/T
rs13483560
MPD | dbSNP | MGI SNP Detail
Chr19:20999445fTmc1 : Intron2SNPGGTGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGTGGGGGG/T
rs30999093
MPD | dbSNP | MGI SNP Detail
Chr19:21004373fTmc1 : Intron1SNPCCC   T    C                                    C/T
rs30602726
MPD | dbSNP | MGI SNP Detail
Chr19:21006181fTmc1 : Intron1SNP GT   T    G                                    G/T
rs31096333
MPD | dbSNP | MGI SNP Detail
Chr19:21024584fTmc1 : Intron1SNP AA   G    A                                    A/G

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
05/08/2013
MGI 5.13
The Jackson Laboratory