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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Ctnnb1 catenin (cadherin associated protein), beta 1 MGI:88276 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs30305975 MPD | dbSNP | MGI SNP Detail | Chr9:120840608 | f | Ctnnb1 : Locus-Region | 1 | SNP | C | A | C | C | A/C | |||||||||||||
| rs30016402 MPD | dbSNP | MGI SNP Detail | Chr9:120845627 | f | Ctnnb1 : Intron | 1 | SNP | C | C | C | A | A/C | |||||||||||||
| rs29594949 MPD | dbSNP | MGI SNP Detail | Chr9:120847186 | f | Ctnnb1 : Intron | 1 | SNP | C | G | C | C | C/G | |||||||||||||
| rs29838513 MPD | dbSNP | MGI SNP Detail | Chr9:120848597 | f | Ctnnb1 : Intron | 1 | SNP | C | G | C | C | C/G | |||||||||||||
| rs30279277 MPD | dbSNP | MGI SNP Detail | Chr9:120850029 | f | Ctnnb1 : Intron | 1 | SNP | C | T | C | C | C/T | |||||||||||||
| rs33487077 MPD | dbSNP | MGI SNP Detail | Chr9:120852640 | f | Ctnnb1 : Intron | 1 | SNP | T | T | T | T | C | T | T | T | T | T | T | C/T | ||||||
| rs33487079 MPD | dbSNP | MGI SNP Detail | Chr9:120852996 | f | Ctnnb1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | C | C/T | |||||
| rs33487081 MPD | dbSNP | MGI SNP Detail | Chr9:120853028 | f | Ctnnb1 : Intron | 1 | SNP | T | T | T | T | T | G | T | T | T | T | T | T | G | G/T | ||||
| rs33487083 MPD | dbSNP | MGI SNP Detail | Chr9:120853062 | f | Ctnnb1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | A/G | |||||
| rs33487915 MPD | dbSNP | MGI SNP Detail | Chr9:120853500 | f | Ctnnb1 : Intron | 1 | SNP | A | A | A | G | A | A | A | A | A | G | A/G | |||||||
| rs33487917 MPD | dbSNP | MGI SNP Detail | Chr9:120854080 | f | Ctnnb1 : Intron | 1 | SNP | G | G | G | C | G | G | G | G | G | C/G | ||||||||
| rs33487919 MPD | dbSNP | MGI SNP Detail | Chr9:120854268 | f | Ctnnb1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||||
| rs33487921 MPD | dbSNP | MGI SNP Detail | Chr9:120854870 | f | Ctnnb1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | C | C/T | |||
| rs33487923 MPD | dbSNP | MGI SNP Detail | Chr9:120854991 | f | Ctnnb1 : Intron | 1 | SNP | G | G | G | A | G | G | G | G | G | A/G | ||||||||
| rs33488615 MPD | dbSNP | MGI SNP Detail | Chr9:120855436 | f | Ctnnb1 : Intron | 1 | SNP | A | A | A | C | A | A | A | A | A | A | C | A/C | ||||||
| rs33488617 MPD | dbSNP | MGI SNP Detail | Chr9:120855616 | f | Ctnnb1 : Intron | 1 | SNP | G | G | G | G | A | G | G | G | G | G | A | A/G | ||||||
| rs33488619 MPD | dbSNP | MGI SNP Detail | Chr9:120855741 | f | Ctnnb1 : Intron | 1 | SNP | A | A | A | G | A | A | A | A | A | A/G | ||||||||
| rs3678451 MPD | dbSNP | MGI SNP Detail | Chr9:120857718 | f | Ctnnb1 : Intron | 2 | SNP | G | G | G | A | A | G | G | G | G | G | G | G | G | A/G | ||||
| rs33488622 MPD | dbSNP | MGI SNP Detail | Chr9:120857789 | f | Ctnnb1 : Intron | 1 | SNP | T | T | T | C | T | T | T | T | T | C | C/T | |||||||
| rs33489204 MPD | dbSNP | MGI SNP Detail | Chr9:120857841 | f | Ctnnb1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | T | C/T | |||||
| rs3680378 MPD | dbSNP | MGI SNP Detail | Chr9:120857983 | f | Ctnnb1 : Intron | 2 | SNP | G | G | C | C | G | G | C/G | |||||||||||
| rs33707837 MPD | dbSNP | MGI SNP Detail | Chr9:120858132 | f | Ctnnb1 : Intron | 1 | SNP | G | G | A | G | G | A/G | ||||||||||||
| rs29944010 MPD | dbSNP | MGI SNP Detail | Chr9:120858167 | f | Ctnnb1 : Intron | 1 | SNP | T | T | A | T | T | A/T | ||||||||||||
| rs33489206 MPD | dbSNP | MGI SNP Detail | Chr9:120859947 | f | Ctnnb1 : Intron | 1 | SNP | T | T | T | G | T | T | T | T | T | G/T | ||||||||
| rs33489208 MPD | dbSNP | MGI SNP Detail | Chr9:120860008 | f | Ctnnb1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | C | C/T | |||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs33489209 MPD | dbSNP | MGI SNP Detail | Chr9:120860284 | f | Ctnnb1 : Intron | 1 | SNP | T | T | T | T | C | T | T | T | T | T | C | C/T | ||||||
| rs33489211 MPD | dbSNP | MGI SNP Detail | Chr9:120861423 | f | Ctnnb1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | ||
| rs33489213 MPD | dbSNP | MGI SNP Detail | Chr9:120861493 | f | Ctnnb1 : Intron | 1 | SNP | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | C/G | ||
| rs33490065 MPD | dbSNP | MGI SNP Detail | Chr9:120861826 | f | Ctnnb1 : Intron | 1 | SNP | T | T | T | T | T | G | T | T | T | T | T | T | T | T | G/T | |||
| rs33490067 MPD | dbSNP | MGI SNP Detail | Chr9:120861859 | f | Ctnnb1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||
| rs13468609 MPD | dbSNP | MGI SNP Detail | Chr9:120862039 | f | Ctnnb1 : Coding-Synonymous | 1 | SNP | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||
| rs13468610 MPD | dbSNP | MGI SNP Detail | Chr9:120862093 | f | Ctnnb1 : Coding-Synonymous | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | C/T | |||
| rs33490072 MPD | dbSNP | MGI SNP Detail | Chr9:120862632 | f | Ctnnb1 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | T | T | T | T | T | T | T | A/T | ||
| rs33490814 MPD | dbSNP | MGI SNP Detail | Chr9:120862751 | f | Ctnnb1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T | ||
| rs33490816 MPD | dbSNP | MGI SNP Detail | Chr9:120862785 | f | Ctnnb1 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | G | G | G | G | T | G | G/T | |||
| rs33490818 MPD | dbSNP | MGI SNP Detail | Chr9:120863047 | f | Ctnnb1 : Intron | 1 | SNP | C | C | C | C | C | G | C | C | G | C | C | C | C | G | C | C/G | ||
| rs33490820 MPD | dbSNP | MGI SNP Detail | Chr9:120863806 | f | Ctnnb1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| rs33490822 MPD | dbSNP | MGI SNP Detail | Chr9:120863840 | f | Ctnnb1 : Intron | 1 | SNP | A | A | A | G | A | G | A | A | A | A | G | A/G | ||||||
| rs33491544 MPD | dbSNP | MGI SNP Detail | Chr9:120865372 | f | Ctnnb1 : Intron | 1 | SNP | A | G | G | A | A | G | A | A | A | A | A | A | A | A/G | ||||
| rs33491546 MPD | dbSNP | MGI SNP Detail | Chr9:120867222 | f | Ctnnb1 : Intron | 1 | SNP | C | C | C | C | T | C | C | C | C | C | C | C | C/T | |||||
| rs33491548 MPD | dbSNP | MGI SNP Detail | Chr9:120867332 | f | Ctnnb1 : Intron | 1 | SNP | G | G | G | G | G | C | G | G | G | G | G | G | C | G | C/G | |||
| rs33491550 MPD | dbSNP | MGI SNP Detail | Chr9:120867814 | f | Ctnnb1 : Intron | 1 | SNP | A | A | A | A | A | G | A | G | A | A | A | G | G | A/G | ||||
| rs33491552 MPD | dbSNP | MGI SNP Detail | Chr9:120867949 | f | Ctnnb1 : Intron | 1 | SNP | A | A | A | A | G | A | A | A | A | A | A | G | A | A/G | ||||
| rs33492454 MPD | dbSNP | MGI SNP Detail | Chr9:120868055 | f | Ctnnb1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A/C | ||
| rs33492456 MPD | dbSNP | MGI SNP Detail | Chr9:120868176 | f | Ctnnb1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| rs33492458 MPD | dbSNP | MGI SNP Detail | Chr9:120869140 | f | Ctnnb1 : mRNA-UTR | 1 | SNP | C | C | C | C | C | G | C | C | C | C | C | C | C | C | C | C/G | ||
| rs33492460 MPD | dbSNP | MGI SNP Detail | Chr9:120869203 | f | Ctnnb1 : mRNA-UTR | 1 | SNP | T | T | T | T | G | T | T | T | T | T | T | T | T | G/T | ||||
| rs33492462 MPD | dbSNP | MGI SNP Detail | Chr9:120869259 | f | Ctnnb1 : mRNA-UTR | 1 | SNP | A | A | A | A | G | A | A | A | A | A | A | A | A | A/G | ||||
| rs33493264 MPD | dbSNP | MGI SNP Detail | Chr9:120869960 | f | Ctnnb1 : Locus-Region | 1 | SNP | G | G | G | G | A | G | A | G | G | G | G | A | A | A/G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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