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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Pomt1
protein-O-mannosyltransferase 1
MGI:2138994

87 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs28236447
MPD | dbSNP | MGI SNP Detail
Chr2:32234590fDwh : within coordinates of
Gm13610 : within coordinates of
Pomt1 : 2000 bp upstream of
Prrc2b : Intron
1SNPC CCCC C CCTCCCCTCC/T
rs28236446
MPD | dbSNP | MGI SNP Detail
Chr2:32234648fDwh : within coordinates of
Gm13610 : within coordinates of
Pomt1 : 1942 bp upstream of
Prrc2b : Intron
1SNPT T TT T T T TTTTGG/T
rs28236445
MPD | dbSNP | MGI SNP Detail
Chr2:32234677fDwh : within coordinates of
Gm13610 : within coordinates of
Pomt1 : 1913 bp upstream of
Prrc2b : Intron
1SNPA AAAA A AATAAAAT A/T
rs28236444
MPD | dbSNP | MGI SNP Detail
Chr2:32234808fDwh : within coordinates of
Gm13610 : within coordinates of
Pomt1 : Locus-Region
Prrc2b : Intron
1SNPG GGGG T GGGGGGGGTG/T
rs28236443
MPD | dbSNP | MGI SNP Detail
Chr2:32235512fDwh : within coordinates of
Gm13610 : within coordinates of
Pomt1 : Locus-Region
1SNPC CCCC C CCTCCCCTCC/T
rs28236442
MPD | dbSNP | MGI SNP Detail
Chr2:32235539fDwh : within coordinates of
Gm13610 : within coordinates of
Pomt1 : Locus-Region
1SNPA AAAA G AAGAAAAGAA/G
rs28236441
MPD | dbSNP | MGI SNP Detail
Chr2:32235595fDwh : within coordinates of
Gm13610 : within coordinates of
Pomt1 : Locus-Region
1SNPC CCCC T CCTCCCCTCC/T
rs28236440
MPD | dbSNP | MGI SNP Detail
Chr2:32235636fDwh : within coordinates of
Gm13610 : within coordinates of
Pomt1 : Locus-Region
1SNPG GGGG A GGAGGGGAGA/G
rs28236439
MPD | dbSNP | MGI SNP Detail
Chr2:32235669fDwh : within coordinates of
Gm13610 : within coordinates of
Pomt1 : Locus-Region
1SNP  TTT     TC   TC C/T
rs28236438
MPD | dbSNP | MGI SNP Detail
Chr2:32236319fDwh : within coordinates of
Gm13610 : within coordinates of
Pomt1 : Locus-Region
1SNPA AAAA G AAGAAAAG A/G
rs28236437
MPD | dbSNP | MGI SNP Detail
Chr2:32236370fDwh : within coordinates of
Gm13610 : within coordinates of
Pomt1 : Locus-Region
1SNPT TTTT C TTCTTTTC C/T
rs28236436
MPD | dbSNP | MGI SNP Detail
Chr2:32236381fDwh : within coordinates of
Gm13610 : within coordinates of
Pomt1 : Locus-Region
1SNPT TTTT G TTGTTTTG G/T
rs28236435
MPD | dbSNP | MGI SNP Detail
Chr2:32236578fDwh : within coordinates of
Pomt1 : Locus-Region
1SNPG GGGG A GG GGGG  A/G
rs28236434
MPD | dbSNP | MGI SNP Detail
Chr2:32236847fDwh : within coordinates of
Pomt1 : Intron
1SNPG GGGG G GGGGGGGA A/G
rs28236433
MPD | dbSNP | MGI SNP Detail
Chr2:32237153fDwh : within coordinates of
Pomt1 : Intron
1SNPA AAAA   AAGAAAAG A/G
rs28236432
MPD | dbSNP | MGI SNP Detail
Chr2:32237426fDwh : within coordinates of
Pomt1 : Coding-NonSynonymous
1SNPG GGGG G GGGGGGGA A/G
rs28236431
MPD | dbSNP | MGI SNP Detail
Chr2:32238343fDwh : within coordinates of
Pomt1 : Intron
1SNPT TTTT G TTGTTTTG G/T
rs28236430
MPD | dbSNP | MGI SNP Detail
Chr2:32239889fDwh : within coordinates of
Pomt1 : Intron
1SNPA AAAA   AAGAAAAG A/G
rs28236429
MPD | dbSNP | MGI SNP Detail
Chr2:32240804fDwh : within coordinates of
Pomt1 : Intron
1SNPC CCCC C CCCCCCCT C/T
rs28236428
MPD | dbSNP | MGI SNP Detail
Chr2:32240814fDwh : within coordinates of
Pomt1 : Intron
1SNPG GGGG A GGGGGGGG A/G
rs28236427
MPD | dbSNP | MGI SNP Detail
Chr2:32241112fDwh : within coordinates of
Pomt1 : Intron
1SNPA AAAA A AAGAAAAG A/G
rs28236426
MPD | dbSNP | MGI SNP Detail
Chr2:32241242fDwh : within coordinates of
Pomt1 : Intron
1SNPT TTTT T TTCTTTTC C/T
rs28236425
MPD | dbSNP | MGI SNP Detail
Chr2:32241762fDwh : within coordinates of
Pomt1 : Coding-Synonymous
1SNPC CCCC T CCCCCCCC C/T
rs28236424
MPD | dbSNP | MGI SNP Detail
Chr2:32241796fDwh : within coordinates of
Pomt1 : Coding-NonSynonymous
1SNPA AAAA G AAGAAAAG A/G
rs28236423
MPD | dbSNP | MGI SNP Detail
Chr2:32241906fDwh : within coordinates of
Pomt1 : Intron
1SNPA A  A     GAAAAG A/G
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs28236422
MPD | dbSNP | MGI SNP Detail
Chr2:32242078fDwh : within coordinates of
Pomt1 : Intron
1SNPA AAAA G AAGAAAAG A/G
rs28236421
MPD | dbSNP | MGI SNP Detail
Chr2:32242832fDwh : within coordinates of
Pomt1 : Intron
1SNPA AAAA G  AGAAAAG A/G
rs28236420
MPD | dbSNP | MGI SNP Detail
Chr2:32242963fDwh : within coordinates of
Pomt1 : Coding-Synonymous
1SNPT TTTT C TTCTTTTC C/T
rs28236419
MPD | dbSNP | MGI SNP Detail
Chr2:32243338fDwh : within coordinates of
Pomt1 : Intron
1SNP  AAAA T AATAAAAT A/T
rs28236418
MPD | dbSNP | MGI SNP Detail
Chr2:32243559fDwh : within coordinates of
Pomt1 : Intron
1SNPA AAAA A AAGAAAAG A/G
rs28236417
MPD | dbSNP | MGI SNP Detail
Chr2:32243652fDwh : within coordinates of
Pomt1 : Coding-Synonymous
1SNPT TTTT C TTCTTTTC C/T
rs28236416
MPD | dbSNP | MGI SNP Detail
Chr2:32244282fDwh : within coordinates of
Pomt1 : Coding-NonSynonymous
1SNPG GGGG A GGGGGGGG A/G
rs28236415
MPD | dbSNP | MGI SNP Detail
Chr2:32244445fDwh : within coordinates of
Pomt1 : Intron
1SNPG GGGG G GGAGGGGA A/G
rs28236414
MPD | dbSNP | MGI SNP Detail
Chr2:32244828fDwh : within coordinates of
Pomt1 : Intron
1SNPT TTTT C TTCTTTTC C/T
rs28236413
MPD | dbSNP | MGI SNP Detail
Chr2:32245815fDwh : within coordinates of
Pomt1 : Intron
1SNPG GGGG A GGGGGGGGGA/G
rs28236412
MPD | dbSNP | MGI SNP Detail
Chr2:32245920fDwh : within coordinates of
Pomt1 : Intron
1SNPA AAAA G AAGAAAAGAA/G
rs28236411
MPD | dbSNP | MGI SNP Detail
Chr2:32245931fDwh : within coordinates of
Pomt1 : Intron
1SNPT TTTT   TTTTTTT CC/T
rs28236410
MPD | dbSNP | MGI SNP Detail
Chr2:32246129fDwh : within coordinates of
Pomt1 : Intron
1SNP  GGGG A GGGGGGGGGA/G
rs28236409
MPD | dbSNP | MGI SNP Detail
Chr2:32246194fDwh : within coordinates of
Pomt1 : Intron
1SNPG GGGG A GGGGGGGGGA/G
rs28236408
MPD | dbSNP | MGI SNP Detail
Chr2:32246282fDwh : within coordinates of
Pomt1 : Intron
1SNPG GGGG A GGGGGGGGGA/G
rs28236407
MPD | dbSNP | MGI SNP Detail
Chr2:32246291fDwh : within coordinates of
Pomt1 : Intron
1SNPG GGGG G GGAGGGGAGA/G
rs28236406
MPD | dbSNP | MGI SNP Detail
Chr2:32246342fDwh : within coordinates of
Pomt1 : Intron
1SNPC CCCC C CCTCCCCCCC/T
rs28236405
MPD | dbSNP | MGI SNP Detail
Chr2:32246718fDwh : within coordinates of
Pomt1 : Intron
1SNPC CCCC C CCTCCCCTCC/T
rs28236404
MPD | dbSNP | MGI SNP Detail
Chr2:32246828fDwh : within coordinates of
Pomt1 : Intron
1SNPC CCCC T CCCCCCCCCC/T
rs28236403
MPD | dbSNP | MGI SNP Detail
Chr2:32246961fDwh : within coordinates of
Pomt1 : Intron
1SNPT TTTT C TTTTTTTTTC/T
rs28236402
MPD | dbSNP | MGI SNP Detail
Chr2:32246973fDwh : within coordinates of
Pomt1 : Intron
1SNPC CCCC C CCCCCCCACA/C
rs28236401
MPD | dbSNP | MGI SNP Detail
Chr2:32247008fDwh : within coordinates of
Pomt1 : Intron
1SNPT TTTT C TTTTTTTTTC/T
rs28236400
MPD | dbSNP | MGI SNP Detail
Chr2:32247459fDwh : within coordinates of
Pomt1 : Intron
1SNPC CCCC G CCGCCCCGGC/G
rs28236399
MPD | dbSNP | MGI SNP Detail
Chr2:32247785fDwh : within coordinates of
Pomt1 : Intron
1SNP  GGGG   GGAGGGG GA/G
rs28236398
MPD | dbSNP | MGI SNP Detail
Chr2:32248165fDwh : within coordinates of
Pomt1 : Intron
1SNP  AAAA A AAGAAAAGAA/G
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs50167989
MPD | dbSNP | MGI SNP Detail
Chr2:32248227fDwh : within coordinates of
Pomt1 : Intron
1SNP CC               C
rs28236397
MPD | dbSNP | MGI SNP Detail
Chr2:32248928fDwh : within coordinates of
Pomt1 : Intron
1SNP  AAAA G AAAAAAAAAA/G
rs28236396
MPD | dbSNP | MGI SNP Detail
Chr2:32249500fDwh : within coordinates of
Pomt1 : Intron
1SNP  CCCC T CCCCCCCCCC/T
rs28236395
MPD | dbSNP | MGI SNP Detail
Chr2:32249801fDwh : within coordinates of
Pomt1 : Intron
1SNP  TTTT C TTCTTTTCCC/T
rs28236394
MPD | dbSNP | MGI SNP Detail
Chr2:32249830fDwh : within coordinates of
Pomt1 : Intron
1SNP  AAAA A AAGAAAA AA/G
rs28236393
MPD | dbSNP | MGI SNP Detail
Chr2:32249985fDwh : within coordinates of
Pomt1 : Intron
1SNP  GGGG G GGGGGGGGTG/T
rs28236392
MPD | dbSNP | MGI SNP Detail
Chr2:32250129fDwh : within coordinates of
Pomt1 : Intron
1SNP  AAAA G AAGAAAAGGA/G
rs6386933
MPD | dbSNP | MGI SNP Detail
Chr2:32250934fDwh : within coordinates of
Pomt1 : Intron
2SNP  TTTTTTCTTCTTTTCTC/T
rs6388043
MPD | dbSNP | MGI SNP Detail
Chr2:32251176fDwh : within coordinates of
Pomt1 : Intron
2SNP  GGGGGGAGGAGGGGAGA/G
rs6389028
MPD | dbSNP | MGI SNP Detail
Chr2:32251350fDwh : within coordinates of
Pomt1 : Coding-Synonymous
2SNP  AAAAAAGAAGAAAAGAA/G
rs6389060
MPD | dbSNP | MGI SNP Detail
Chr2:32251378fDwh : within coordinates of
Pomt1 : Intron
1SNP      G A         A/G
rs28236391
MPD | dbSNP | MGI SNP Detail
Chr2:32251433fDwh : within coordinates of
Pomt1 : Intron
1SNP  CCCC   CCCCCCCCGC/G
rs28236390
MPD | dbSNP | MGI SNP Detail
Chr2:32251435fDwh : within coordinates of
Pomt1 : Intron
1SNP  GGGG G GGTGGGGTGG/T
rs28236389
MPD | dbSNP | MGI SNP Detail
Chr2:32251514fDwh : within coordinates of
Pomt1 : Intron
1SNP  CCCC C CCTCCCCTCC/T
rs28236388
MPD | dbSNP | MGI SNP Detail
Chr2:32251554fDwh : within coordinates of
Pomt1 : Intron
1SNP  CCCC   CCCCCCCCAA/C
rs28236387
MPD | dbSNP | MGI SNP Detail
Chr2:32251597fDwh : within coordinates of
Pomt1 : Intron
1SNP  AAAA A AAGAAAAGAA/G
rs28236386
MPD | dbSNP | MGI SNP Detail
Chr2:32251606fDwh : within coordinates of
Pomt1 : Intron
1SNP  GGGG A GGGGGGGGGA/G
rs28236385
MPD | dbSNP | MGI SNP Detail
Chr2:32251633fDwh : within coordinates of
Pomt1 : Intron
1SNP  CCCC C CCTCCCCTCC/T
rs28236384
MPD | dbSNP | MGI SNP Detail
Chr2:32251829fDwh : within coordinates of
Pomt1 : Intron
1SNP  CCCC C CCTCCCCTCC/T
rs28236383
MPD | dbSNP | MGI SNP Detail
Chr2:32252183fDwh : within coordinates of
Pomt1 : Intron
1SNP  TTTT T TTCTTTTCTC/T
rs28236382
MPD | dbSNP | MGI SNP Detail
Chr2:32252263fDwh : within coordinates of
Pomt1 : Intron
1SNP  TTTT C TTCTTTTCCC/T
rs28236381
MPD | dbSNP | MGI SNP Detail
Chr2:32252506fDwh : within coordinates of
Pomt1 : Intron
1SNP  CCCC C CCTCCCC CC/T
rs28236380
MPD | dbSNP | MGI SNP Detail
Chr2:32252602fDwh : within coordinates of
Pomt1 : Intron
1SNP  CCCC C CCTCCCCTCC/T
rs28236379
MPD | dbSNP | MGI SNP Detail
Chr2:32252791fDwh : within coordinates of
Pomt1 : Intron
1SNP  AAAA A AAGAAAAGAA/G
rs28236378
MPD | dbSNP | MGI SNP Detail
Chr2:32253177fDwh : within coordinates of
Pomt1 : Intron
1SNP  AAAA A AAGAAAAGAA/G
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs28236377
MPD | dbSNP | MGI SNP Detail
Chr2:32253496fDwh : within coordinates of
Pomt1 : Intron
1SNP  GGGG G GGAGGGGGGA/G
rs28236376
MPD | dbSNP | MGI SNP Detail
Chr2:32253912fDwh : within coordinates of
Pomt1 : Intron
1SNP  AAAA A  AGAAAAGAA/G
rs28236375
MPD | dbSNP | MGI SNP Detail
Chr2:32253952fDwh : within coordinates of
Pomt1 : Intron
1SNP  GGGG G GGAGGGGAGA/G
rs28236374
MPD | dbSNP | MGI SNP Detail
Chr2:32254007fDwh : within coordinates of
Pomt1 : Intron
1SNP  CCCC C CCTCCCCTCC/T
rs28236373
MPD | dbSNP | MGI SNP Detail
Chr2:32254031fDwh : within coordinates of
Pomt1 : Intron
1SNP  TTTT T TTCTTTTCTC/T
rs28236372
MPD | dbSNP | MGI SNP Detail
Chr2:32254082fDwh : within coordinates of
Pomt1 : Intron
1SNP  TTTT T TTCTTTTCTC/T
rs49884662
MPD | dbSNP | MGI SNP Detail
Chr2:32254363fDwh : within coordinates of
Pomt1 : Coding-Synonymous
1SNP TC      C        C/T
rs28236369
MPD | dbSNP | MGI SNP Detail
Chr2:32255527fDwh : within coordinates of
Pomt1 : 522 bp downstream of
Uck1 : mRNA-UTR
1SNP  CCCC C CCCCCCCTCC/T
rs28236368
MPD | dbSNP | MGI SNP Detail
Chr2:32255566fDwh : within coordinates of
Pomt1 : 561 bp downstream of
Uck1 : mRNA-UTR
1SNPC CCCC C CCACCCCACA/C
rs6218685
MPD | dbSNP | MGI SNP Detail
Chr2:32256518fDwh : within coordinates of
Pomt1 : 1513 bp downstream of
Uck1 : Intron
1SNP      G T         G/T
rs6218700
MPD | dbSNP | MGI SNP Detail
Chr2:32256523fDwh : within coordinates of
Pomt1 : 1518 bp downstream of
Uck1 : Intron
1SNP      T A         A/T
rs6218765
MPD | dbSNP | MGI SNP Detail
Chr2:32256579fDwh : within coordinates of
Pomt1 : 1574 bp downstream of
Uck1 : Intron
1SNP      C T         C/T

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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory