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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Atp13a2
ATPase type 13A2
MGI:1922022

163 matching SNPs displayed
Full result set is also available in a tab-delimited format.
Include SNPs that map to multiple locations

Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs32841683
MPD | dbSNP | MGI SNP Detail
Chr4:140985185f 2SNPC       T         C                               C/T
rs50701309
MPD | dbSNP | MGI SNP Detail
Chr4:140985717f 1SNP        A                                         A
rs52146278
MPD | dbSNP | MGI SNP Detail
Chr4:140985948f 1SNPG       A         G                               A/G
rs52080998
MPD | dbSNP | MGI SNP Detail
Chr4:140985998f 1SNPG                 G                               G
rs48718270
MPD | dbSNP | MGI SNP Detail
Chr4:140986605f 1SNPT                                                 T
rs51470915
MPD | dbSNP | MGI SNP Detail
Chr4:140986716f 1SNPT                                                 T
rs32185646
MPD | dbSNP | MGI SNP Detail
Chr4:140987636f 2SNPT       C                                         C/T
rs32559945
MPD | dbSNP | MGI SNP Detail
Chr4:140988350f 1SNPT       A         T                               A/T
rs31751744
MPD | dbSNP | MGI SNP Detail
Chr4:140989078f 1SNPC A     A         A                               A/C
rs32235703
MPD | dbSNP | MGI SNP Detail
Chr4:140989109f 2SNPA C     C         A                               A/C
rs32889208
MPD | dbSNP | MGI SNP Detail
Chr4:140989373f 2SNPA G               A                               A/G
rs32591108
MPD | dbSNP | MGI SNP Detail
Chr4:140989412f 2SNPG A               G                               A/G
rs32501025
MPD | dbSNP | MGI SNP Detail
Chr4:140989988f 2SNPG A     A         G                               A/G
rs32903122
MPD | dbSNP | MGI SNP Detail
Chr4:140990225f 2SNPA G     G         G                               A/G
rs31913351
MPD | dbSNP | MGI SNP Detail
Chr4:140990252f 2SNPC T     T         C                               C/T
rs32917212
MPD | dbSNP | MGI SNP Detail
Chr4:140990295f 2SNPT C     C         T                               C/T
rs32029754
MPD | dbSNP | MGI SNP Detail
Chr4:140990301f 2SNPT C     C         T                               C/T
rs32385833
MPD | dbSNP | MGI SNP Detail
Chr4:140991089f 2SNPA G     G         A                               A/G
rs31878192
MPD | dbSNP | MGI SNP Detail
Chr4:140991247f 2SNPT       A         T                               A/T
rs28260921
MPD | dbSNP | MGI SNP Detail
Chr4:140991738f 3SNPA G     G G AA   G                                A/G
rs47552273
MPD | dbSNP | MGI SNP Detail
Chr4:140992585f 1SNPC       T         C                               C/T
rs28260920
MPD | dbSNP | MGI SNP Detail
Chr4:140992619f 1SNP             C   T                                C/T
rs47855488
MPD | dbSNP | MGI SNP Detail
Chr4:140992722f 1SNPA                 A                               A
rs48715050
MPD | dbSNP | MGI SNP Detail
Chr4:140992749f 1SNPC       C         C                               C
rs32596317
MPD | dbSNP | MGI SNP Detail
Chr4:140993429f 2SNPG A         G     G                               A/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs32471849
MPD | dbSNP | MGI SNP Detail
Chr4:140993626f 2SNPC T         C     C                               C/T
rs13461262
MPD | dbSNP | MGI SNP Detail
Chr4:140993841f 2SNPC G               C                               C/G
rs32875038
MPD | dbSNP | MGI SNP Detail
Chr4:140993846f 2SNPC T     T         C                               C/T
rs32628066
MPD | dbSNP | MGI SNP Detail
Chr4:140993890f 2SNPG T     T         G                               G/T
rs28260919
MPD | dbSNP | MGI SNP Detail
Chr4:140994712f 1SNPCC  C CCCCCCCCCCCT                                C/T
rs28260918
MPD | dbSNP | MGI SNP Detail
Chr4:140994869f 1SNPCT  C CCCCTCCCCCCC                                C/T
rs28260917
MPD | dbSNP | MGI SNP Detail
Chr4:140994991f 1SNPGA  G GGGGAGGGGGGG                                A/G
rs32707016
MPD | dbSNP | MGI SNP Detail
Chr4:140995228f 2SNPC T     T   C     C                               C/T
rs28260916
MPD | dbSNP | MGI SNP Detail
Chr4:140995339f 3SNPAGG G GGGGGAAAAAAGA                               A/G
rs28260915
MPD | dbSNP | MGI SNP Detail
Chr4:140995356f 1SNPCT  C CCCCTCCCCCCC                                C/T
rs28260914
MPD | dbSNP | MGI SNP Detail
Chr4:140995389f 2SNPAG  G GGGGGAAAAAAGA                               A/G
rs50102235
MPD | dbSNP | MGI SNP Detail
Chr4:140995418f 1SNPA                 A                               A
rs28260913
MPD | dbSNP | MGI SNP Detail
Chr4:140995541f 2SNPGG  A AAAAGGGGGGGGG                               A/G
rs28260912
MPD | dbSNP | MGI SNP Detail
Chr4:140995579f 2SNPTT  C CCCCTTTTTTTC                                C/T
rs51602937
MPD | dbSNP | MGI SNP Detail
Chr4:140995633f 1SNPG                                                 G
rs45981727
MPD | dbSNP | MGI SNP Detail
Chr4:140995640f 1SNPA                                                 A
rs48572515
MPD | dbSNP | MGI SNP Detail
Chr4:140995645f 1SNPC                                                 C
rs47117657
MPD | dbSNP | MGI SNP Detail
Chr4:140995660f 1SNPG                                                 G
rs28260911
MPD | dbSNP | MGI SNP Detail
Chr4:140995716f 2SNP T  C CCCCT      C                                C/T
rs28260910
MPD | dbSNP | MGI SNP Detail
Chr4:140995849f 3SNPGGA A AAAAGGGGGGGA                                A/G
rs28260909
MPD | dbSNP | MGI SNP Detail
Chr4:140995966f 3SNPTGG G GGGGGTTTTTTG                                G/T
rs28260908
MPD | dbSNP | MGI SNP Detail
Chr4:140996029f 2SNPAG  G GGGGGAAAAAAGA                               A/G
rs51107243
MPD | dbSNP | MGI SNP Detail
Chr4:140996472f 1SNPA       G         A                               A/G
rs48633362
MPD | dbSNP | MGI SNP Detail
Chr4:140996480f 1SNP        A         G                               A/G
rs28260907
MPD | dbSNP | MGI SNP Detail
Chr4:140996499f 1SNPC   C CCCC CCCCCCT                                C/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs28260906
MPD | dbSNP | MGI SNP Detail
Chr4:140996536f 2SNPC   T TTTTCCCCCCCTC                               C/T
rs50482732
MPD | dbSNP | MGI SNP Detail
Chr4:140996600f 1SNPG       A         G                               A/G
rs51042638
MPD | dbSNP | MGI SNP Detail
Chr4:140996628f 1SNPC       T         C                               C/T
rs48508054
MPD | dbSNP | MGI SNP Detail
Chr4:140996629f 1SNPG       A         G                               A/G
rs49087973
MPD | dbSNP | MGI SNP Detail
Chr4:140996636f 1SNPA       G         A                               A/G
rs28260905
MPD | dbSNP | MGI SNP Detail
Chr4:140996702f 1SNPCC  C TCCCCCCCCCCC                                C/T
rs50478935
MPD | dbSNP | MGI SNP Detail
Chr4:140996712f 1SNPC       T         C                               C/T
rs28260904
MPD | dbSNP | MGI SNP Detail
Chr4:140996874f 2SNPAA  G GGGGAAAAAAAGA                               A/G
rs49133047
MPD | dbSNP | MGI SNP Detail
Chr4:140996913f 1SNPT       C         T                               C/T
rs51232066
MPD | dbSNP | MGI SNP Detail
Chr4:140996915f 1SNPG       C         G                               C/G
rs28260903
MPD | dbSNP | MGI SNP Detail
Chr4:140996940f 2SNPAA  G GGGG  A AAAG                                A/G
rs28260902
MPD | dbSNP | MGI SNP Detail
Chr4:140997006f 2SNPGC  C CCCCCGGGGGGCG                               C/G
rs28260901
MPD | dbSNP | MGI SNP Detail
Chr4:140997084f 2SNPAG  G GGGGGAAAAAAGA                               A/G
rs28260900
MPD | dbSNP | MGI SNP Detail
Chr4:140997136f 2SNPTC  C CCCCCTTTTTTCT                               C/T
rs48603080
MPD | dbSNP | MGI SNP Detail
Chr4:140997268f 1SNPT       G         T                               G/T
rs28260899
MPD | dbSNP | MGI SNP Detail
Chr4:140997367f 2SNPCC  T TTTTCCCCCCCTC                               C/T
rs28260898
MPD | dbSNP | MGI SNP Detail
Chr4:140997445f 2SNPAG  G GGGGGAAAAAAGA                               A/G
rs49984958
MPD | dbSNP | MGI SNP Detail
Chr4:140997509f 1SNPT       C         T                               C/T
rs48679228
MPD | dbSNP | MGI SNP Detail
Chr4:140997615f 1SNPG       T                                         G/T
rs47492195
MPD | dbSNP | MGI SNP Detail
Chr4:140997633f 1SNPG       T         G                               G/T
rs51861153
MPD | dbSNP | MGI SNP Detail
Chr4:140998105f 1SNPG       A         G                               A/G
rs48860900
MPD | dbSNP | MGI SNP Detail
Chr4:140998264f 1SNPA       C         A                               A/C
rs48071251
MPD | dbSNP | MGI SNP Detail
Chr4:140998266f 1SNPT       A         T                               A/T
rs50033384
MPD | dbSNP | MGI SNP Detail
Chr4:140998690f 1SNPG       A                                         A/G
rs28260897
MPD | dbSNP | MGI SNP Detail
Chr4:140998873f 2SNPGG  A AAAAGGGGGGGAG                               A/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs32230955
MPD | dbSNP | MGI SNP Detail
Chr4:140998894f 2SNPC A     A         C                               A/C
rs33020239
MPD | dbSNP | MGI SNP Detail
Chr4:140999329f 2SNPG T     T         G                               G/T
rs28260896
MPD | dbSNP | MGI SNP Detail
Chr4:140999344f 1SNPGA  G GGGGAGGGGGGG                                A/G
rs28260895
MPD | dbSNP | MGI SNP Detail
Chr4:140999413f 2SNPCT  T TTTTTCCCCCCTC                               C/T
rs31874374
MPD | dbSNP | MGI SNP Detail
Chr4:140999540f 2SNPG       A         G                               A/G
rs47990174
MPD | dbSNP | MGI SNP Detail
Chr4:140999576f 1SNP        A         G                               A/G
rs28260894
MPD | dbSNP | MGI SNP Detail
Chr4:141000104f 3SNPGAA A AAAAAGGGGGGG                                A/G
rs31832580
MPD | dbSNP | MGI SNP Detail
Chr4:141000118f 2SNPA G     G   A                                     A/G
rs47811633
MPD | dbSNP | MGI SNP Detail
Chr4:141000165f 1SNP        C                                         C
rs28260893
MPD | dbSNP | MGI SNP Detail
Chr4:141000192f 3SNPT C C CCCC  TTTT C                                C/T
rs28260892
MPD | dbSNP | MGI SNP Detail
Chr4:141000193f 1SNPGA  G GGGGAGGGGGGG                                A/G
rs28260891
MPD | dbSNP | MGI SNP Detail
Chr4:141000214f 3SNPACC C CCCCCAAAAAAC                                A/C
rs28260890
MPD | dbSNP | MGI SNP Detail
Chr4:141000383f 3SNPAG  G GGGGGAAAAAAG                                A/G
rs28260889
MPD | dbSNP | MGI SNP Detail
Chr4:141000447f 1SNPGG  G GGGGGGGGGGGA                                A/G
rs32594356
MPD | dbSNP | MGI SNP Detail
Chr4:141000470f 2SNPC       T   C                                     C/T
rs32613131
MPD | dbSNP | MGI SNP Detail
Chr4:141000502f 2SNPA       G   A                                     A/G
rs50369393
MPD | dbSNP | MGI SNP Detail
Chr4:141000550f 1SNPC                                                 C
rs28260888
MPD | dbSNP | MGI SNP Detail
Chr4:141000569f 2SNPGG  A AAAAG GG GGG                                A/G
rs45982302
MPD | dbSNP | MGI SNP Detail
Chr4:141000583f 1SNPA                                                 A
rs28260887
MPD | dbSNP | MGI SNP Detail
Chr4:141000603f 2SNPGT  T TTTTTG GGG T                                G/T
rs28260886
MPD | dbSNP | MGI SNP Detail
Chr4:141000765f 1SNPGC  C CCCCCGGGGGGC                                C/G
rs28260885
MPD | dbSNP | MGI SNP Detail
Chr4:141000799f 1SNPGA  A AAAAAGGGGGGA                                A/G
rs28260884
MPD | dbSNP | MGI SNP Detail
Chr4:141000937f 1SNPCC  A AAAACCCCCCCC                                A/C
rs28260883
MPD | dbSNP | MGI SNP Detail
Chr4:141001497f 1SNPAG  A AAAAGAAAAAAG                                A/G
rs28260882
MPD | dbSNP | MGI SNP Detail
Chr4:141001527f 1SNPGG  G GGGGGGGGGGGT                                G/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs13461260
MPD | dbSNP | MGI SNP Detail
Chr4:141001898f 1SNPAA  G GGGGAAAAAAAG                                A/G
rs13461261
MPD | dbSNP | MGI SNP Detail
Chr4:141001925f 2SNP        G         A                               A/G
rs28260880
MPD | dbSNP | MGI SNP Detail
Chr4:141002109f 3SNPCCA A AAAACC   CCAC                               A/C
rs28260879
MPD | dbSNP | MGI SNP Detail
Chr4:141002115f 1SNP A  C CCCCACC CCCC                                A/C
rs28260878
MPD | dbSNP | MGI SNP Detail
Chr4:141002128f 1SNPGG  G GG GGGGAGA G                                A/G
rs28260877
MPD | dbSNP | MGI SNP Detail
Chr4:141002204f 1SNPGA  G GGGGAGGGGGGG                                A/G
rs32601055
MPD | dbSNP | MGI SNP Detail
Chr4:141002272f 2SNP  T     T         G                               G/T
rs28260876
MPD | dbSNP | MGI SNP Detail
Chr4:141002368f 3SNPTCC C CCCCCTTTTTTCT                               C/T
rs32831961
MPD | dbSNP | MGI SNP Detail
Chr4:141002572f 2SNPG T     T                                         G/T
rs33009497
MPD | dbSNP | MGI SNP Detail
Chr4:141002620f 2SNPA G     G                                         A/G
rs32366617
MPD | dbSNP | MGI SNP Detail
Chr4:141002813f 2SNPT G     G                                         G/T
rs28260875
MPD | dbSNP | MGI SNP Detail
Chr4:141002998f 1SNPAA  C CCCCAAAAAA C                                A/C
rs28260874
MPD | dbSNP | MGI SNP Detail
Chr4:141003114f 1SNPCC  C CCCCCCCCCCCG                                C/G
rs28260873
MPD | dbSNP | MGI SNP Detail
Chr4:141003154f 1SNP    T TTTT     C C                                C/T
rs28260872
MPD | dbSNP | MGI SNP Detail
Chr4:141003465f 3SNPG   T TTTTGGGGGGGGG                               G/T
rs48143382
MPD | dbSNP | MGI SNP Detail
Chr4:141003724f 1SNPC       T                                         C/T
rs49233325
MPD | dbSNP | MGI SNP Detail
Chr4:141003838f 1SNPA                                                 A
rs28260871
MPD | dbSNP | MGI SNP Detail
Chr4:141003872f 2SNPCC  T TTTTCCCCCCCT                                C/T
rs51009138
MPD | dbSNP | MGI SNP Detail
Chr4:141003877f 1SNPT                                                 T
rs28260870
MPD | dbSNP | MGI SNP Detail
Chr4:141004001f 2SNPT   C CCCC T T T C                                C/T
rs48752881
MPD | dbSNP | MGI SNP Detail
Chr4:141004008f 1SNPT                                                 T
rs28260869
MPD | dbSNP | MGI SNP Detail
Chr4:141004037f 2SNPTC  C CCCCCTTTTTTC                                C/T
rs28260868
MPD | dbSNP | MGI SNP Detail
Chr4:141004054f 1SNPG   A AAAAGGGGGGGA                                A/G
rs28260867
MPD | dbSNP | MGI SNP Detail
Chr4:141004397f 1SNPCA  A AAAAACCCCCCC                                A/C
rs28260866
MPD | dbSNP | MGI SNP Detail
Chr4:141004509f 1SNPCC  A AAAACCCCCCCC                                A/C
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs31870436
MPD | dbSNP | MGI SNP Detail
Chr4:141004583f 2SNP  T     T         C                               C/T
rs28260865
MPD | dbSNP | MGI SNP Detail
Chr4:141004906f 3SNPCT  T TTTTTCCCCCCTC                               C/T
rs28260864
MPD | dbSNP | MGI SNP Detail
Chr4:141005101f 1SNPCT  C CCCCTCCCCCCT                                C/T
rs28260863
MPD | dbSNP | MGI SNP Detail
Chr4:141005243f 1SNPG   G GGGG GGGGGGA                                A/G
rs28260862
MPD | dbSNP | MGI SNP Detail
Chr4:141005281f 1SNPC   C CCCC CCCCCCT                                C/T
rs28260861
MPD | dbSNP | MGI SNP Detail
Chr4:141005287f 1SNPTC  T TTTTCTTTTTT                                 C/T
rs28260860
MPD | dbSNP | MGI SNP Detail
Chr4:141005362f 1SNPAG  A AAAAGAAAAAAG                                A/G
rs28260859
MPD | dbSNP | MGI SNP Detail
Chr4:141005510f 1SNPGA  G GGGGAGGGGGGA                                A/G
rs28260858
MPD | dbSNP | MGI SNP Detail
Chr4:141005825f 1SNPGT  G GGGGT GGGGGG                                G/T
rs28260857
MPD | dbSNP | MGI SNP Detail
Chr4:141005826f 1SNPC   T TTTT CCCCCCC                                C/T
rs28260856
MPD | dbSNP | MGI SNP Detail
Chr4:141005832f 1SNPT   G GGGGTT   T G                                G/T
rs28260855
MPD | dbSNP | MGI SNP Detail
Chr4:141005925f 1SNP G  A AAAAG      A                                A/G
rs28260854
MPD | dbSNP | MGI SNP Detail
Chr4:141006081f 1SNPTC  T TTTTCTTTTTTC                                C/T
rs28260853
MPD | dbSNP | MGI SNP Detail
Chr4:141006126f 1SNPAG  A AAAAGAAAAAAG                                A/G
rs28260852
MPD | dbSNP | MGI SNP Detail
Chr4:141006159f 1SNPAG    GGGGGAAAAAAG                                A/G
rs28260851
MPD | dbSNP | MGI SNP Detail
Chr4:141006382f 1SNPTA  T TTTTATTTTTTA                                A/T
rs28260850
MPD | dbSNP | MGI SNP Detail
Chr4:141006449f 1SNPCT  C CCCCTCCCCCCC                                C/T
rs28260849
MPD | dbSNP | MGI SNP Detail
Chr4:141006490f 1SNPAG  A AAAAGAAAAAAG                                A/G
rs28260848
MPD | dbSNP | MGI SNP Detail
Chr4:141006574f 1SNPGA  G GGGGAGGGGGGA                                A/G
rs52315481
MPD | dbSNP | MGI SNP Detail
Chr4:141006577f 1SNPC       T                                         C/T
rs28260847
MPD | dbSNP | MGI SNP Detail
Chr4:141006649f 2SNPAG  G GGGGGA AAAAG                                A/G
rs28260846
MPD | dbSNP | MGI SNP Detail
Chr4:141006795f 1SNPCT  C CCCCTCCCCCCT                                C/T
rs28260845
MPD | dbSNP | MGI SNP Detail
Chr4:141006807f 1SNPGG  G GGGGGGGGGGGA                                A/G
rs4232382
MPD | dbSNP | MGI SNP Detail
Chr4:141007060r 2SNP???C?CC??CC CCCCCCCCC?GCCCCCCCCCCCCCCCCCCCCCCCCCCTA/C/G/T
rs4232381
MPD | dbSNP | MGI SNP Detail
Chr4:141007069r 1SNPGGG G  GG            AG                           A/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs4232380
MPD | dbSNP | MGI SNP Detail
Chr4:141007216r 2SNPACA A AAAACAAAAAAC   CA                           A/C
rs31974384
MPD | dbSNP | MGI SNP Detail
Chr4:141007383f 2SNPC T                                               C/T
rs32130974
MPD | dbSNP | MGI SNP Detail
Chr4:141007408f 2SNPC T                                               C/T
rs32959746
MPD | dbSNP | MGI SNP Detail
Chr4:141007551f 1SNPC T                                               C/T
rs32674573
MPD | dbSNP | MGI SNP Detail
Chr4:141007630f 1SNPG A                                               A/G
rs28260844
MPD | dbSNP | MGI SNP Detail
Chr4:141007836f 1SNPAG  A AAAAGAAAAAAG                                A/G
rs28260843
MPD | dbSNP | MGI SNP Detail
Chr4:141007859f 2SNPCC  T TTTTCCCCCCCC                                C/T
rs28260842
MPD | dbSNP | MGI SNP Detail
Chr4:141007932f 3SNPAC  C CCCCCAAAAAAC                                A/C
rs49509428
MPD | dbSNP | MGI SNP Detail
Chr4:141007955f 1SNPA                                                 A
rs28260841
MPD | dbSNP | MGI SNP Detail
Chr4:141008176f 1SNPTC  T TTTTCTTTTTTC                                C/T
rs28260840
MPD | dbSNP | MGI SNP Detail
Chr4:141008295f 1SNPT   T TTTT TTTTTTG                                G/T
rs28260839
MPD | dbSNP | MGI SNP Detail
Chr4:141009086f 1SNPGG  G GGGGGGGGGGGA                                A/G
rs28260838
MPD | dbSNP | MGI SNP Detail
Chr4:141009137f 1SNPAG  A AAAAGAAAAAAG                                A/G

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
05/17/2016
MGI 6.03
The Jackson Laboratory