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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Chrna1 cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle) MGI:87885 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs4223221 MPD | dbSNP | MGI SNP Detail | Chr2:73401141 | r | Chrna1 : Locus-Region | 1 | SNP | C | C | C | C | T | C | C | C | C/T | ||||||||||
| rs4223220 MPD | dbSNP | MGI SNP Detail | Chr2:73401143 | r | Chrna1 : Locus-Region | 1 | SNP | C | C | C | C | T | C | T | C | C/T | ||||||||||
| rs27954005 MPD | dbSNP | MGI SNP Detail | Chr2:73401994 | f | Chrna1 : mRNA-UTR | 1 | SNP | A | A | A | A | A | A | A | A | A | A | C | A/C | |||||||
| rs27954004 MPD | dbSNP | MGI SNP Detail | Chr2:73404326 | f | Chrna1 : Coding-Synonymous | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | G | A | G | A | A/G | |||
| rs27954003 MPD | dbSNP | MGI SNP Detail | Chr2:73404497 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | C/G | |||
| rs27954002 MPD | dbSNP | MGI SNP Detail | Chr2:73404595 | f | Chrna1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A/T | |||
| rs27954001 MPD | dbSNP | MGI SNP Detail | Chr2:73404637 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | A | G | A | G | A/G | |||
| rs27954000 MPD | dbSNP | MGI SNP Detail | Chr2:73404759 | f | Chrna1 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | A | G | A | G | A/G | |||
| rs27953999 MPD | dbSNP | MGI SNP Detail | Chr2:73405212 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | A/G | |||
| rs27953998 MPD | dbSNP | MGI SNP Detail | Chr2:73405228 | f | Chrna1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | A | T | T | A/T | |||||
| rs27953997 MPD | dbSNP | MGI SNP Detail | Chr2:73405260 | f | Chrna1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||||
| rs27953996 MPD | dbSNP | MGI SNP Detail | Chr2:73405264 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G/T | |||
| rs27953995 MPD | dbSNP | MGI SNP Detail | Chr2:73405302 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | A/G | |||
| rs27953994 MPD | dbSNP | MGI SNP Detail | Chr2:73405321 | f | Chrna1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | C | T | C/T | ||||
| rs27953993 MPD | dbSNP | MGI SNP Detail | Chr2:73405404 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | A | G | A/G | ||||
| rs27953992 MPD | dbSNP | MGI SNP Detail | Chr2:73405468 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | A/G | |||
| rs27953991 MPD | dbSNP | MGI SNP Detail | Chr2:73405478 | f | Chrna1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |||
| rs27953990 MPD | dbSNP | MGI SNP Detail | Chr2:73405510 | f | Chrna1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | G | A | A | A/G | |||||
| rs27953989 MPD | dbSNP | MGI SNP Detail | Chr2:73405812 | f | Chrna1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | C | T | T | C/T | |||||
| rs27953988 MPD | dbSNP | MGI SNP Detail | Chr2:73405990 | f | Chrna1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | G | A | G | A | A/G | |||
| rs27953987 MPD | dbSNP | MGI SNP Detail | Chr2:73405996 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | A/G | |||
| rs27953986 MPD | dbSNP | MGI SNP Detail | Chr2:73406027 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |||
| rs27953985 MPD | dbSNP | MGI SNP Detail | Chr2:73406269 | f | Chrna1 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | |||
| rs27953984 MPD | dbSNP | MGI SNP Detail | Chr2:73406302 | f | Chrna1 : Coding-Synonymous | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||
| rs27953983 MPD | dbSNP | MGI SNP Detail | Chr2:73406687 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G | |||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27953982 MPD | dbSNP | MGI SNP Detail | Chr2:73406730 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | A/G | |||
| rs27953981 MPD | dbSNP | MGI SNP Detail | Chr2:73406776 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | C | G | G | G | C/G | |||
| rs27953980 MPD | dbSNP | MGI SNP Detail | Chr2:73406828 | f | Chrna1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | T | A | A | A | A/T | |||
| rs27953979 MPD | dbSNP | MGI SNP Detail | Chr2:73407243 | f | Chrna1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||
| rs27953978 MPD | dbSNP | MGI SNP Detail | Chr2:73407312 | f | Chrna1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | C | T | C/T | |||||
| rs27953977 MPD | dbSNP | MGI SNP Detail | Chr2:73407331 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |||
| rs27953976 MPD | dbSNP | MGI SNP Detail | Chr2:73407417 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | |||
| rs27953975 MPD | dbSNP | MGI SNP Detail | Chr2:73407737 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | A | G | A/G | |||||
| rs27953974 MPD | dbSNP | MGI SNP Detail | Chr2:73407759 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | A | G | A/G | ||||
| rs27953973 MPD | dbSNP | MGI SNP Detail | Chr2:73407899 | f | Chrna1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||||
| rs27953972 MPD | dbSNP | MGI SNP Detail | Chr2:73408546 | f | Chrna1 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | A | G | A | G | A/G | |||
| rs27953971 MPD | dbSNP | MGI SNP Detail | Chr2:73408627 | f | Chrna1 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||
| rs27953970 MPD | dbSNP | MGI SNP Detail | Chr2:73408690 | f | Chrna1 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | T | C | T | C | C/T | |||
| rs27953969 MPD | dbSNP | MGI SNP Detail | Chr2:73408719 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | A/G | ||||||
| rs27953968 MPD | dbSNP | MGI SNP Detail | Chr2:73408721 | f | Chrna1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | T | C | C/T | ||||
| rs27953967 MPD | dbSNP | MGI SNP Detail | Chr2:73408745 | f | Chrna1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | T | C | C/T | |||||
| rs27953966 MPD | dbSNP | MGI SNP Detail | Chr2:73408807 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | |||
| rs27953965 MPD | dbSNP | MGI SNP Detail | Chr2:73408812 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | A/G | |||
| rs27953964 MPD | dbSNP | MGI SNP Detail | Chr2:73408847 | f | Chrna1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A/G | |||
| rs27953963 MPD | dbSNP | MGI SNP Detail | Chr2:73409350 | f | Chrna1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||
| rs27953962 MPD | dbSNP | MGI SNP Detail | Chr2:73409359 | f | Chrna1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C/T | |||
| rs27953961 MPD | dbSNP | MGI SNP Detail | Chr2:73409476 | f | Chrna1 : Coding-Synonymous | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | G | A | G | A | A/G | |||
| rs27953960 MPD | dbSNP | MGI SNP Detail | Chr2:73409665 | f | Chrna1 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |||
| rs27953959 MPD | dbSNP | MGI SNP Detail | Chr2:73409720 | f | Chrna1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | C | T | C | T | C/T | |||
| rs27953958 MPD | dbSNP | MGI SNP Detail | Chr2:73409908 | f | Chrna1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | T | A | A | A | A | T | A | A/T | |||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27953957 MPD | dbSNP | MGI SNP Detail | Chr2:73409955 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | |||
| rs27953956 MPD | dbSNP | MGI SNP Detail | Chr2:73410333 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | A | G | A | G | A/G | |||
| rs27953955 MPD | dbSNP | MGI SNP Detail | Chr2:73410344 | f | Chrna1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | C | T | C/T | ||||
| rs27953954 MPD | dbSNP | MGI SNP Detail | Chr2:73410380 | f | Chrna1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | C | T | C | T | C/T | |||
| rs27953953 MPD | dbSNP | MGI SNP Detail | Chr2:73410596 | f | Chrna1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | T | C | T | C | C/T | |||
| rs27953952 MPD | dbSNP | MGI SNP Detail | Chr2:73410673 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | A/G | |||
| rs27953951 MPD | dbSNP | MGI SNP Detail | Chr2:73410745 | f | Chrna1 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G/T | |||
| rs27953950 MPD | dbSNP | MGI SNP Detail | Chr2:73410995 | f | Chrna1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | G | C | C | C | C/G | |||
| rs27953949 MPD | dbSNP | MGI SNP Detail | Chr2:73411079 | f | Chrna1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | C | T | C | T | C/T | |||
| rs27953948 MPD | dbSNP | MGI SNP Detail | Chr2:73411102 | f | Chrna1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | C | T | C | T | C/T | |||
| rs27953947 MPD | dbSNP | MGI SNP Detail | Chr2:73414151 | f | Chrna1 : Intron | 1 | SNP | C | T | C | T | C/T | ||||||||||||||
| rs27953946 MPD | dbSNP | MGI SNP Detail | Chr2:73414827 | f | Chrna1 : Intron | 1 | SNP | C | T | T | T | C/T | ||||||||||||||
| rs27953945 MPD | dbSNP | MGI SNP Detail | Chr2:73415076 | f | Chrna1 : Intron | 1 | SNP | A | G | A | G | A/G | ||||||||||||||
| rs27953944 MPD | dbSNP | MGI SNP Detail | Chr2:73415130 | f | Chrna1 : Intron | 1 | SNP | C | T | C | T | C/T | ||||||||||||||
| rs27953943 MPD | dbSNP | MGI SNP Detail | Chr2:73415308 | f | Chrna1 : Intron | 1 | SNP | T | C | T | C | C/T | ||||||||||||||
| rs27953942 MPD | dbSNP | MGI SNP Detail | Chr2:73415336 | f | Chrna1 : Intron | 1 | SNP | A | G | A | G | A/G | ||||||||||||||
| rs27953941 MPD | dbSNP | MGI SNP Detail | Chr2:73415354 | f | Chrna1 : Intron | 1 | SNP | T | G | G | G | G/T | ||||||||||||||
| rs27953940 MPD | dbSNP | MGI SNP Detail | Chr2:73415437 | f | Chrna1 : Intron | 1 | SNP | C | A | C | A | A/C | ||||||||||||||
| rs27953939 MPD | dbSNP | MGI SNP Detail | Chr2:73415449 | f | Chrna1 : Intron | 1 | SNP | T | C | T | C | C/T | ||||||||||||||
| rs27953938 MPD | dbSNP | MGI SNP Detail | Chr2:73415456 | f | Chrna1 : Intron | 1 | SNP | C | C | T | C | C/T | ||||||||||||||
| rs27953937 MPD | dbSNP | MGI SNP Detail | Chr2:73415530 | f | Chrna1 : Intron | 1 | SNP | A | G | G | A/G | |||||||||||||||
| rs27953936 MPD | dbSNP | MGI SNP Detail | Chr2:73416254 | f | Chrna1 : Intron | 1 | SNP | G | T | G | T | G/T | ||||||||||||||
| rs27953935 MPD | dbSNP | MGI SNP Detail | Chr2:73416458 | f | Chrna1 : Intron | 1 | SNP | C | T | C | T | C/T | ||||||||||||||
| rs27953934 MPD | dbSNP | MGI SNP Detail | Chr2:73416548 | f | Chrna1 : Intron | 1 | SNP | G | A | G | A | A/G | ||||||||||||||
| rs27953933 MPD | dbSNP | MGI SNP Detail | Chr2:73416601 | f | Chrna1 : Intron | 1 | SNP | A | C | A | C | A/C | ||||||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27953932 MPD | dbSNP | MGI SNP Detail | Chr2:73416665 | f | Chrna1 : Intron | 1 | SNP | A | G | A | A | A/G | ||||||||||||||
| rs27953931 MPD | dbSNP | MGI SNP Detail | Chr2:73416708 | f | Chrna1 : Intron | 1 | SNP | T | C | C | C | C/T | ||||||||||||||
| rs27953930 MPD | dbSNP | MGI SNP Detail | Chr2:73416730 | f | Chrna1 : Intron | 1 | SNP | T | G | T | G | G/T | ||||||||||||||
| rs27953929 MPD | dbSNP | MGI SNP Detail | Chr2:73416746 | f | Chrna1 : Intron | 1 | SNP | T | C | T | C | C/T | ||||||||||||||
| rs27953928 MPD | dbSNP | MGI SNP Detail | Chr2:73416795 | f | Chrna1 : Intron | 1 | SNP | A | G | A | G | A/G | ||||||||||||||
| rs27953927 MPD | dbSNP | MGI SNP Detail | Chr2:73416812 | f | Chrna1 : Intron | 1 | SNP | C | C | T | C | C/T | ||||||||||||||
| rs27953926 MPD | dbSNP | MGI SNP Detail | Chr2:73416865 | f | Chrna1 : Intron | 1 | SNP | C | T | T | T | C/T | ||||||||||||||
| rs27953925 MPD | dbSNP | MGI SNP Detail | Chr2:73417374 | f | Chrna1 : Intron | 1 | SNP | G | A | G | A | A/G | ||||||||||||||
| rs27953924 MPD | dbSNP | MGI SNP Detail | Chr2:73417712 | f | Chrna1 : Intron | 1 | SNP | T | T | T | T | T | T | T | C | T | T | T | T | T | C/T | |||||
| rs27953923 MPD | dbSNP | MGI SNP Detail | Chr2:73418256 | f | Chrna1 : Intron | 1 | SNP | T | T | T | T | T | T | T | C | T | T | T | T | T | C/T | |||||
| rs27953922 MPD | dbSNP | MGI SNP Detail | Chr2:73418475 | f | Chrna1 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | C/T | ||||||
| rs27953921 MPD | dbSNP | MGI SNP Detail | Chr2:73418579 | f | Chrna1 : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | C | T | T | C | T | T | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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