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Mouse SNPs
Query Results -- Summary
Genome Coordinate Discrepancy
The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details).
 Symbol
Name
ID
Treh
trehalase (brush-border membrane glycoprotein)
MGI:1926230

111 matching SNPs displayed


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs32616884
MPD | dbSNP | MGI SNP Detail
Chr9:44479621fTreh : Locus-Region1SNPG GAGG GGAGGAGGGAA/G
rs32616886
MPD | dbSNP | MGI SNP Detail
Chr9:44479632fTreh : Locus-Region1SNPG GGGG AGGGGGGGAGA/G
rs32616888
MPD | dbSNP | MGI SNP Detail
Chr9:44479786fTreh : Locus-Region1SNPG GGGG GGGGGGGGAGA/G
rs29688088
MPD | dbSNP | MGI SNP Detail
Chr9:44479831fTreh : Locus-Region1SNP A      G        A/G
rs32616890
MPD | dbSNP | MGI SNP Detail
Chr9:44480068fTreh : Locus-Region1SNPC CCCC CCCCCCCCTCC/T
rs32616892
MPD | dbSNP | MGI SNP Detail
Chr9:44480092fTreh : Locus-Region1SNPC CCCC TCCCCCCCCCC/T
rs32617614
MPD | dbSNP | MGI SNP Detail
Chr9:44480128fTreh : Locus-Region1SNPC CCCC CCCCCCCCTCC/T
rs32617616
MPD | dbSNP | MGI SNP Detail
Chr9:44480163fTreh : Locus-Region1SNPT CCCC CCCTCCT CCC/T
rs32617618
MPD | dbSNP | MGI SNP Detail
Chr9:44480746fTreh : Locus-Region1SNPA TTTT TTTATTATTTA/T
rs32617620
MPD | dbSNP | MGI SNP Detail
Chr9:44480801fTreh : Locus-Region1SNPT CTCC TCTTCTTCTTC/T
rs32617622
MPD | dbSNP | MGI SNP Detail
Chr9:44480816fTreh : Locus-Region1SNPT TTTT GTTTTTTTTTG/T
rs32618434
MPD | dbSNP | MGI SNP Detail
Chr9:44480862fTreh : Locus-Region1SNPC CTCC CCTCCTCCCTC/T
rs32618436
MPD | dbSNP | MGI SNP Detail
Chr9:44480944fTreh : Locus-Region1SNPC GGGG GGGCGGCGGGC/G
rs32618438
MPD | dbSNP | MGI SNP Detail
Chr9:44480992fTreh : Locus-Region1SNPT AAAA TAATAATATAA/T
rs32618440
MPD | dbSNP | MGI SNP Detail
Chr9:44481017fTreh : Locus-Region1SNPG GAGG GGAGGAGGGAA/G
rs32618442
MPD | dbSNP | MGI SNP Detail
Chr9:44481278fTreh : Locus-Region1SNPT CCCC  CCTCCTCCCC/T
rs32619154
MPD | dbSNP | MGI SNP Detail
Chr9:44481315fTreh : Locus-Region1SNPT CCCC  CC CCTC CC/T
rs32619156
MPD | dbSNP | MGI SNP Detail
Chr9:44481322fTreh : mRNA-UTR1SNPC CCCC CCCACC C CA/C
rs32619158
MPD | dbSNP | MGI SNP Detail
Chr9:44481333fTreh : mRNA-UTR1SNPT CCCC CCCTCCTCTCC/T
rs32619160
MPD | dbSNP | MGI SNP Detail
Chr9:44481704fTreh : Intron1SNPT GGGG GGGTGGGGGGG/T
rs32619162
MPD | dbSNP | MGI SNP Detail
Chr9:44481993fTreh : Intron1SNPG AAAA  AAGAAGAGAA/G
rs32619854
MPD | dbSNP | MGI SNP Detail
Chr9:44482143fTreh : Intron1SNPA AAAA AAAAAAAAGAA/G
rs32619856
MPD | dbSNP | MGI SNP Detail
Chr9:44482313fTreh : Intron1SNPC CCCC  CCCCCCCACA/C
rs32619857
MPD | dbSNP | MGI SNP Detail
Chr9:44482348fTreh : Intron1SNPC CCCC CCCCCCCCACA/C
rs32619859
MPD | dbSNP | MGI SNP Detail
Chr9:44482509fTreh : Intron1SNPG AAAA  AAGAGGAG A/G
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs32619861
MPD | dbSNP | MGI SNP Detail
Chr9:44482669fTreh : Intron1SNPT CTCC  CTTCTTCTTC/T
rs32619863
MPD | dbSNP | MGI SNP Detail
Chr9:44482687fTreh : Intron1SNPG AAAA  AAGAAGAGAA/G
rs32620695
MPD | dbSNP | MGI SNP Detail
Chr9:44482861fTreh : Intron1SNPC TTTT CTTCTTCTTTC/T
rs32620697
MPD | dbSNP | MGI SNP Detail
Chr9:44483101fTreh : Intron1SNPA AGAA  AGAAGAAAGA/G
rs32620699
MPD | dbSNP | MGI SNP Detail
Chr9:44483120fTreh : Intron1SNPC TTTT  TTCTTCTTTC/T
rs32620701
MPD | dbSNP | MGI SNP Detail
Chr9:44483387fTreh : Intron1SNPG CGCC  CGGCGGCGGC/G
rs32620703
MPD | dbSNP | MGI SNP Detail
Chr9:44483895fTreh : Intron1SNPG AAAA AAAGAAGAAAA/G
rs32621515
MPD | dbSNP | MGI SNP Detail
Chr9:44483992fTreh : Intron1SNPA GGGG GGGAGGAGGGA/G
rs32621517
MPD | dbSNP | MGI SNP Detail
Chr9:44484219fTreh : Intron1SNPC TTTT  TTCTTCTCTC/T
rs32621519
MPD | dbSNP | MGI SNP Detail
Chr9:44484498fTreh : Intron1SNPA GGGG GGGAGGAGGGA/G
rs32621521
MPD | dbSNP | MGI SNP Detail
Chr9:44485063fTreh : Intron1SNPT CCCC  CCTCCTCCCC/T
rs32617004
MPD | dbSNP | MGI SNP Detail
Chr9:44485123fTreh : Intron1SNPT AAAA AAATAATATAA/T
rs32617006
MPD | dbSNP | MGI SNP Detail
Chr9:44485289fTreh : Intron1SNPG AAAA AAAGAAGAGAA/G
rs30135816
MPD | dbSNP | MGI SNP Detail
Chr9:44485467fTreh : Intron1SNP  A   G A        A/G
rs32617008
MPD | dbSNP | MGI SNP Detail
Chr9:44485559fTreh : Intron1SNPA GGGG GGGAGGAGAGA/G
rs32617010
MPD | dbSNP | MGI SNP Detail
Chr9:44485770fTreh : Intron1SNPG AAAA  AAGAAGAGAA/G
rs32617011
MPD | dbSNP | MGI SNP Detail
Chr9:44485921fTreh : Intron1SNPC CCCC TCCCCCCCCCC/T
rs32617013
MPD | dbSNP | MGI SNP Detail
Chr9:44486036fTreh : Intron1SNPT CCCC CCCTCCTCTCC/T
rs32617854
MPD | dbSNP | MGI SNP Detail
Chr9:44486052fTreh : Intron1SNPT AAAA AAATAATATAA/T
rs32617856
MPD | dbSNP | MGI SNP Detail
Chr9:44486971fTreh : Intron1SNPA TTTT  TTATTATATA/T
rs32617858
MPD | dbSNP | MGI SNP Detail
Chr9:44487017fTreh : Intron1SNPA GGGG  GGAGGAGAGA/G
rs32617860
MPD | dbSNP | MGI SNP Detail
Chr9:44487233fTreh : Intron1SNPG AAAA GAAGAAGAGAA/G
rs32617862
MPD | dbSNP | MGI SNP Detail
Chr9:44487270fTreh : Intron1SNPT CCCC CCCTCCTCTCC/T
rs32618554
MPD | dbSNP | MGI SNP Detail
Chr9:44487348fTreh : Intron1SNPA GGGG GGGAGGAGAGA/G
rs32618556
MPD | dbSNP | MGI SNP Detail
Chr9:44487377fTreh : Intron1SNPT CCCC CCCTCCTCTCC/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs32618558
MPD | dbSNP | MGI SNP Detail
Chr9:44487509fTreh : Intron1SNPC CCCC CCCCCACCCAA/C
rs32618560
MPD | dbSNP | MGI SNP Detail
Chr9:44487691fTreh : Intron1SNPA TTTT  TTATTATATA/T
rs32618562
MPD | dbSNP | MGI SNP Detail
Chr9:44487826fTreh : Intron1SNPT CCCC  CCTCCTCCCC/T
rs32619304
MPD | dbSNP | MGI SNP Detail
Chr9:44487883fTreh : Intron1SNPC TTTT  TTCTTCTCTC/T
rs32619306
MPD | dbSNP | MGI SNP Detail
Chr9:44487944fTreh : Intron1SNPC  TCC  CT  TTCCTC/T
rs32619308
MPD | dbSNP | MGI SNP Detail
Chr9:44488361fTreh : Intron1SNP  TTTT  TTCTTCT TC/T
rs32619310
MPD | dbSNP | MGI SNP Detail
Chr9:44488626fTreh : Intron1SNPG AGAA GAGGAGGAGGA/G
rs32619312
MPD | dbSNP | MGI SNP Detail
Chr9:44489043fTreh : Intron1SNPA AT A TATAATAAATA/T
rs32620084
MPD | dbSNP | MGI SNP Detail
Chr9:44489267fTreh : Intron1SNPA GGGG  GGAGGAGAGA/G
rs32620086
MPD | dbSNP | MGI SNP Detail
Chr9:44489286fTreh : Intron1SNPA GGGG AGGAGGAGGGA/G
rs32620088
MPD | dbSNP | MGI SNP Detail
Chr9:44489328fTreh : Intron1SNPT CCCC CCCTCCTCCCC/T
rs32620090
MPD | dbSNP | MGI SNP Detail
Chr9:44489398fTreh : Coding-Synonymous1SNPG AAAA  AAGAAGAGAA/G
rs32620092
MPD | dbSNP | MGI SNP Detail
Chr9:44489427fTreh : Coding-NonSynonymous1SNPG AAAA AAAGAAGAGAA/G
rs32620754
MPD | dbSNP | MGI SNP Detail
Chr9:44489537fTreh : Intron1SNPA GGGG  GGAG AGAGA/G
rs32620756
MPD | dbSNP | MGI SNP Detail
Chr9:44489866fTreh : Intron1SNPT CCCC CCCTCCTCTCC/T
rs29702031
MPD | dbSNP | MGI SNP Detail
Chr9:44489928fTreh : Intron2SNPC GGGGC GGCG CC GC/G
rs32620759
MPD | dbSNP | MGI SNP Detail
Chr9:44490089fTreh : Intron1SNPG AAAA  AAGAAGAGAA/G
rs32620761
MPD | dbSNP | MGI SNP Detail
Chr9:44490211fTreh : Intron1SNPG AAAA  AAGAAGAAAA/G
rs32620763
MPD | dbSNP | MGI SNP Detail
Chr9:44490270fTreh : Intron1SNPC TTTT CTTCTTCTCCC/T
rs32621525
MPD | dbSNP | MGI SNP Detail
Chr9:44490525fTreh : Intron1SNPT CCCC CCCTCCTCTCC/T
rs32621526
MPD | dbSNP | MGI SNP Detail
Chr9:44490608fTreh : Intron1SNPA GGGG  GGAGGAGAGA/G
rs32621528
MPD | dbSNP | MGI SNP Detail
Chr9:44490678fTreh : Intron1SNPA GAGG  GAAGGAGAAA/G
rs32621530
MPD | dbSNP | MGI SNP Detail
Chr9:44490741fTreh : Coding-Synonymous1SNPC CTCC CCTCCCCCCTC/T
rs32621532
MPD | dbSNP | MGI SNP Detail
Chr9:44490826fTreh : Intron1SNPA AAAA AAAAAAAAATA/T
rs29637354
MPD | dbSNP | MGI SNP Detail
Chr9:44490844fTreh : Intron1SNPGGC     C        C/G
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs29843932
MPD | dbSNP | MGI SNP Detail
Chr9:44490856fTreh : Intron2SNPCCTTTT  TTCTTCT TC/T
rs29702595
MPD | dbSNP | MGI SNP Detail
Chr9:44490871fTreh : Intron2SNPGGAAAAA AAGAAGAGAA/G
rs30518334
MPD | dbSNP | MGI SNP Detail
Chr9:44490895fTreh : Intron1SNPCCT   T T        C/T
rs30137627
MPD | dbSNP | MGI SNP Detail
Chr9:44491021fTreh : Coding-Synonymous2SNPGGAGAAAGAGGAAGAGGA/G
rs32622377
MPD | dbSNP | MGI SNP Detail
Chr9:44491055fTreh : Intron1SNPA AGAA  AGAAAAAAGA/G
rs32622379
MPD | dbSNP | MGI SNP Detail
Chr9:44491150fTreh : Coding-Synonymous1SNPC CTCC CCTCCCCCCTC/T
rs32622381
MPD | dbSNP | MGI SNP Detail
Chr9:44491159fTreh : Coding-Synonymous1SNPC CCCC TCCCCCCCCCC/T
rs30076587
MPD | dbSNP | MGI SNP Detail
Chr9:44491225fTreh : Coding-Synonymous2SNPCCTTTTTCTTCTTCTCTC/T
rs32623294
MPD | dbSNP | MGI SNP Detail
Chr9:44491494fTreh : Intron1SNPT TTTT CTTTTTTTTTC/T
rs32623296
MPD | dbSNP | MGI SNP Detail
Chr9:44491676fTreh : Coding-Synonymous1SNPC CCCC TCCCCCCCCCC/T
rs33664755
MPD | dbSNP | MGI SNP Detail
Chr9:44491830fTreh : Intron1SNPAA    G G        A/G
rs32623298
MPD | dbSNP | MGI SNP Detail
Chr9:44491984fTreh : Coding-Synonymous1SNPT TTTT CTTTTTTTTTC/T
rs30020150
MPD | dbSNP | MGI SNP Detail
Chr9:44492148fTreh : Intron1SNPAAG   G G        A/G
rs30528146
MPD | dbSNP | MGI SNP Detail
Chr9:44492157fTreh : Intron1SNPCCT   T T        C/T
rs30132973
MPD | dbSNP | MGI SNP Detail
Chr9:44492246fTreh : Intron1SNPCCA   A A        A/C
rs32623300
MPD | dbSNP | MGI SNP Detail
Chr9:44492251fTreh : Intron1SNPC CCCC TCCCCCCCCCC/T
rs32623302
MPD | dbSNP | MGI SNP Detail
Chr9:44492285fTreh : Intron1SNPG GGGG AGGGGGGGGGA/G
rs32624104
MPD | dbSNP | MGI SNP Detail
Chr9:44492365fTreh : Intron1SNPC CCCC TCCCCCCCCCC/T
rs32617034
MPD | dbSNP | MGI SNP Detail
Chr9:44492486fPhldb1 : Locus-Region
Treh : Intron
2SNPCCTTTT TTTCTTCTCTC/T
rs32617036
MPD | dbSNP | MGI SNP Detail
Chr9:44492532fPhldb1 : Locus-Region
Treh : Intron
1SNPG GGGG CGGGGGGGGGC/G
rs32617038
MPD | dbSNP | MGI SNP Detail
Chr9:44492560fPhldb1 : Locus-Region
Treh : Intron
1SNPT TGTT GTGGTTTT GG/T
rs32617040
MPD | dbSNP | MGI SNP Detail
Chr9:44492596fPhldb1 : Locus-Region
Treh : Coding-NonSynonymous
1SNPG GAGG GGAGGGGGGAA/G
rs32617042
MPD | dbSNP | MGI SNP Detail
Chr9:44492667fPhldb1 : Locus-Region
Treh : Coding-Synonymous
1SNPC  C   TCC C CCC C/T
rs30293365
MPD | dbSNP | MGI SNP Detail
Chr9:44492688fPhldb1 : Locus-Region
Treh : Coding-Synonymous
2SNPCCTCTT CTCCTTCTCCC/T
rs30383290
MPD | dbSNP | MGI SNP Detail
Chr9:44492743fPhldb1 : Locus-Region
Treh : Coding-NonSynonymous
1SNPAAT   T T        A/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs32617885
MPD | dbSNP | MGI SNP Detail
Chr9:44492848fPhldb1 : Locus-Region
Treh : Intron
1SNPG GAGG  GAGGGGGGAA/G
rs32617887
MPD | dbSNP | MGI SNP Detail
Chr9:44492956fPhldb1 : Locus-Region
Treh : Intron
1SNPT TTTT TTTTTTTTCTC/T
rs32617888
MPD | dbSNP | MGI SNP Detail
Chr9:44493286fPhldb1 : Locus-Region
Treh : Intron
1SNPG GGGG TGGGGGGGGGG/T
rs32617889
MPD | dbSNP | MGI SNP Detail
Chr9:44493499fPhldb1 : Locus-Region
Treh : Intron
1SNPT TCTT TT TTTTTTCC/T
rs32617891
MPD | dbSNP | MGI SNP Detail
Chr9:44493526fPhldb1 : Locus-Region
Treh : Intron
1SNPC CCCC TCCCCCCCCCC/T
rs32617893
MPD | dbSNP | MGI SNP Detail
Chr9:44494267fPhldb1 : Locus-Region
Treh : mRNA-UTR
1SNPG AGAA GAGGAAGAGGA/G
rs32618735
MPD | dbSNP | MGI SNP Detail
Chr9:44494371fPhldb1 : Locus-Region
Treh : mRNA-UTR
1SNPC CTCC CCTCCCCCCTC/T
rs32618737
MPD | dbSNP | MGI SNP Detail
Chr9:44494372fPhldb1 : Locus-Region
Treh : mRNA-UTR
1SNPT TTTT TT TTTTTCTC/T
rs29647352
MPD | dbSNP | MGI SNP Detail
Chr9:44494494fPhldb1 : mRNA-UTR
Treh : Locus-Region
1SNPA G   G G        A/G
rs13472819
MPD | dbSNP | MGI SNP Detail
Chr9:44494765rPhldb1 : mRNA-UTR
Treh : Locus-Region
1SNPG T   T          G/T
rs13472820
MPD | dbSNP | MGI SNP Detail
Chr9:44494868rPhldb1 : mRNA-UTR
Treh : Locus-Region
1SNPG  CGG GGCGGGGGGCC/G

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last database update
05/08/2013
MGI 5.13
The Jackson Laboratory