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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Pnkp
polynucleotide kinase 3'- phosphatase
MGI:1891698

49 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs31329114
MPD | dbSNP | MGI SNP Detail
Chr7:44855189fAkt1s1 : mRNA-UTR
fit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Locus-Region
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
2SNPTCT   T T          C/T
rs49502404
MPD | dbSNP | MGI SNP Detail
Chr7:44855526fAkt1s1 : Intron
fit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Locus-Region
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP AG     G          A/G
rs36285008
MPD | dbSNP | MGI SNP Detail
Chr7:44855795fAkt1s1 : Intron
fit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Locus-Region
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNPA AAAA GAAGA AA GGAA/G
rs31578936
MPD | dbSNP | MGI SNP Detail
Chr7:44856650ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Locus-Region
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
2SNP GT   T T          G/T
rs47205821
MPD | dbSNP | MGI SNP Detail
Chr7:44856719ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Locus-Region
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP CG     G          C/G
rs31056182
MPD | dbSNP | MGI SNP Detail
Chr7:44856736ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Locus-Region
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
2SNP GA   A A          A/G
rs32255225
MPD | dbSNP | MGI SNP Detail
Chr7:44856841ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Locus-Region
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
2SNP AG   G G          A/G
rs36852348
MPD | dbSNP | MGI SNP Detail
Chr7:44857313ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : mRNA-UTR
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP  C CC TCCTC C   T C/T
rs36670310
MPD | dbSNP | MGI SNP Detail
Chr7:44857830ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
2SNPTGTTTT  TTGT T   GTG/T
rs47585570
MPD | dbSNP | MGI SNP Detail
Chr7:44857889ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP TC     C          C/T
rs50540574
MPD | dbSNP | MGI SNP Detail
Chr7:44857955ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP TC     C          C/T
rs51350736
MPD | dbSNP | MGI SNP Detail
Chr7:44858082ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP AT     T          A/T
rs46032569
MPD | dbSNP | MGI SNP Detail
Chr7:44858279ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP AG     G          A/G
rs264625243
MPD | dbSNP | MGI SNP Detail
Chr7:44858485ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Coding-NonSynonymous
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP            T  G   G/T
rs31136317
MPD | dbSNP | MGI SNP Detail
Chr7:44859040ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
3SNPCCC   T C   C  T   C/T
rs52161714
MPD | dbSNP | MGI SNP Detail
Chr7:44859125ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP CT     T          C/T
rs51460468
MPD | dbSNP | MGI SNP Detail
Chr7:44859182ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP CA     A          A/C
rs31088104
MPD | dbSNP | MGI SNP Detail
Chr7:44859340ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
2SNPCTC   C C          C/T
rs32203747
MPD | dbSNP | MGI SNP Detail
Chr7:44859530ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP GA   A A          A/G
rs31296143
MPD | dbSNP | MGI SNP Detail
Chr7:44860374ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Coding-Synonymous
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
2SNPAGA   A A          A/G
rs32039065
MPD | dbSNP | MGI SNP Detail
Chr7:44860503ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
2SNPGAG   G G          A/G
rs31616495
MPD | dbSNP | MGI SNP Detail
Chr7:44860835ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNPCTC   C C          C/T
rs36397349
MPD | dbSNP | MGI SNP Detail
Chr7:44861162ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Coding-NonSynonymous
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP  G  T  GGG      G G/T
rs31677582
MPD | dbSNP | MGI SNP Detail
Chr7:44861589ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
2SNP  T   G     T  G   G/T
rs37557757
MPD | dbSNP | MGI SNP Detail
Chr7:44861764ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNPG GGGG AGGAG G  AAGA/G
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs46061410
MPD | dbSNP | MGI SNP Detail
Chr7:44861875ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
2SNP  G     G   G  A   A/G
rs45829860
MPD | dbSNP | MGI SNP Detail
Chr7:44861876ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
2SNP  T     T   T  C   C/T
rs48992112
MPD | dbSNP | MGI SNP Detail
Chr7:44861888ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP  A     A          A
rs50015283
MPD | dbSNP | MGI SNP Detail
Chr7:44861915ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP AA     A          A
rs49742334
MPD | dbSNP | MGI SNP Detail
Chr7:44861916ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP TC     C          C/T
rs51755650
MPD | dbSNP | MGI SNP Detail
Chr7:44861929ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP CC                C
rs48886894
MPD | dbSNP | MGI SNP Detail
Chr7:44861942ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP AA                A
rs47864282
MPD | dbSNP | MGI SNP Detail
Chr7:44861949ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP CT     T          C/T
rs51784065
MPD | dbSNP | MGI SNP Detail
Chr7:44861962ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP  G     G          G
rs45847431
MPD | dbSNP | MGI SNP Detail
Chr7:44862014ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP CT     T          C/T
rs47681840
MPD | dbSNP | MGI SNP Detail
Chr7:44862068ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP GG                G
rs47999332
MPD | dbSNP | MGI SNP Detail
Chr7:44862088ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP GA     A          A/G
rs46897355
MPD | dbSNP | MGI SNP Detail
Chr7:44862095ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
2SNP GG     G   G  A   A/G
rs51511303
MPD | dbSNP | MGI SNP Detail
Chr7:44862128ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Intron
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
1SNP AG     G          A/G
rs13467163
MPD | dbSNP | MGI SNP Detail
Chr7:44862368ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Coding-Synonymous
Prt5 : within coordinates of
psrt : within coordinates of
ru2l : within coordinates of
4SNPCCCTCCTCCTCTCTTTCC C/T
rs47021023
MPD | dbSNP | MGI SNP Detail
Chr7:44862843ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : mRNA-UTR
Prt5 : within coordinates of
psrt : within coordinates of
Ptov1 : Intron
ru2l : within coordinates of
1SNP TC     C          C/T
rs47979928
MPD | dbSNP | MGI SNP Detail
Chr7:44863169ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Locus-Region
Prt5 : within coordinates of
psrt : within coordinates of
Ptov1 : mRNA-UTR
ru2l : within coordinates of
1SNP AG     G          A/G
rs13462919
MPD | dbSNP | MGI SNP Detail
Chr7:44863428rfit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : Locus-Region
Prt5 : within coordinates of
psrt : within coordinates of
Ptov1 : mRNA-UTR
ru2l : within coordinates of
2SNP CT   T T          C/T
rs49291390
MPD | dbSNP | MGI SNP Detail
Chr7:44863756ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : 831 bp downstream of
Prt5 : within coordinates of
psrt : within coordinates of
Ptov1 : Intron
ru2l : within coordinates of
2SNP CC     C   C  T   C/T
rs31971627
MPD | dbSNP | MGI SNP Detail
Chr7:44863855ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : 930 bp downstream of
Prt5 : within coordinates of
psrt : within coordinates of
Ptov1 : Intron
ru2l : within coordinates of
3SNPTCT     T   T  C   C/T
rs31717620
MPD | dbSNP | MGI SNP Detail
Chr7:44864172ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : 1247 bp downstream of
Prt5 : within coordinates of
psrt : within coordinates of
Ptov1 : Intron
ru2l : within coordinates of
1SNPCAC     C          A/C
rs31280263
MPD | dbSNP | MGI SNP Detail
Chr7:44864501ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : 1576 bp downstream of
Prt5 : within coordinates of
psrt : within coordinates of
Ptov1 : Intron
ru2l : within coordinates of
3SNPG G   A G   G  A   A/G
rs49967575
MPD | dbSNP | MGI SNP Detail
Chr7:44864744ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : 1819 bp downstream of
Prt5 : within coordinates of
psrt : within coordinates of
Ptov1 : Intron
ru2l : within coordinates of
1SNP TC     C          C/T
rs32367857
MPD | dbSNP | MGI SNP Detail
Chr7:44864849ffit2 : within coordinates of
l7R4 : within coordinates of
l7R5 : within coordinates of
Pnkp : 1924 bp downstream of
Prt5 : within coordinates of
psrt : within coordinates of
Ptov1 : Intron
ru2l : within coordinates of
2SNP TC   C C          C/T

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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory