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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
B3gnt2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 MGI:1889505 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs29439651 MPD | dbSNP | MGI SNP Detail | Chr11:22732845 | f | B3gnt2 : Locus-Region | 1 | SNP | T | T | G | G/T | |||||||||||||||||
| rs26858692 MPD | dbSNP | MGI SNP Detail | Chr11:22733417 | f | B3gnt2 : Locus-Region | 1 | SNP | G | A | A | A | A | G | A/G | ||||||||||||||
| rs29468873 MPD | dbSNP | MGI SNP Detail | Chr11:22733903 | f | B3gnt2 : Locus-Region | 1 | SNP | G | G | G | C | C/G | ||||||||||||||||
| rs29418659 MPD | dbSNP | MGI SNP Detail | Chr11:22736476 | f | B3gnt2 : Coding-Synonymous | 1 | SNP | G | G | G | A | A/G | ||||||||||||||||
| rs29420650 MPD | dbSNP | MGI SNP Detail | Chr11:22736503 | f | B3gnt2 : Coding-Synonymous | 1 | SNP | A | A | A | G | A/G | ||||||||||||||||
| rs4228621 MPD | dbSNP | MGI SNP Detail | Chr11:22736820 | f | B3gnt2 : Coding-Synonymous | 1 | SNP | A | A | A | A | A | A | G | A | A/G | ||||||||||||
| rs4228622 MPD | dbSNP | MGI SNP Detail | Chr11:22736934 | f | B3gnt2 : Coding-NonSynonymous | 2 | SNP | C | C | C | A | C | A | A | A | C | A/C | |||||||||||
| rs4228623 MPD | dbSNP | MGI SNP Detail | Chr11:22737021 | f | B3gnt2 : Coding-NonSynonymous | 1 | SNP | G | G | G | G | G | G | A | G | A/G | ||||||||||||
| rs4228624 MPD | dbSNP | MGI SNP Detail | Chr11:22737035 | f | B3gnt2 : Coding-NonSynonymous | 1 | SNP | G | G | G | G | G | G | A | G | A/G | ||||||||||||
| rs4228625 MPD | dbSNP | MGI SNP Detail | Chr11:22737150 | f | B3gnt2 : Coding-NonSynonymous | 1 | SNP | T | T | T | T | C | T | T | T | C/T | ||||||||||||
| rs26858691 MPD | dbSNP | MGI SNP Detail | Chr11:22737150 | f | B3gnt2 : Coding-NonSynonymous | 1 | SNP | T | C | T | T | T | C | C/T | ||||||||||||||
| rs26858690 MPD | dbSNP | MGI SNP Detail | Chr11:22737172 | f | B3gnt2 : Coding-Synonymous | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A/G | ||||||||||
| rs29388804 MPD | dbSNP | MGI SNP Detail | Chr11:22737448 | f | B3gnt2 : Intron | 1 | SNP | T | T | C | C/T | |||||||||||||||||
| rs26858689 MPD | dbSNP | MGI SNP Detail | Chr11:22738334 | f | B3gnt2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | C/T | ||||||||||
| rs26858688 MPD | dbSNP | MGI SNP Detail | Chr11:22738720 | f | B3gnt2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A/G | ||||||||||
| rs29440004 MPD | dbSNP | MGI SNP Detail | Chr11:22740047 | f | B3gnt2 : Intron | 1 | SNP | A | A | C | A/C | |||||||||||||||||
| rs26858687 MPD | dbSNP | MGI SNP Detail | Chr11:22740237 | f | B3gnt2 : Intron | 1 | SNP | G | G | G | T | G | G | G | G | G | G | G | G/T | |||||||||
| rs26858686 MPD | dbSNP | MGI SNP Detail | Chr11:22742574 | f | B3gnt2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | A/G | ||||||||||
| rs26858685 MPD | dbSNP | MGI SNP Detail | Chr11:22743378 | f | B3gnt2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | T | G | G/T | |||||||||
| rs26858684 MPD | dbSNP | MGI SNP Detail | Chr11:22743921 | f | B3gnt2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | A | G | A/G | |||||||||
| rs26858683 MPD | dbSNP | MGI SNP Detail | Chr11:22744351 | f | B3gnt2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A/G | ||||||||||
| rs26858682 MPD | dbSNP | MGI SNP Detail | Chr11:22744465 | f | B3gnt2 : Intron | 1 | SNP | A | A | A | G | A | G | A | A | A | G | A | A/G | |||||||||
| rs6316417 MPD | dbSNP | MGI SNP Detail | Chr11:22744536 | f | B3gnt2 : Intron | 1 | SNP | A | C | A/C | ||||||||||||||||||
| rs6316973 MPD | dbSNP | MGI SNP Detail | Chr11:22744663 | f | B3gnt2 : Intron | 1 | SNP | T | C | C/T | ||||||||||||||||||
| rs6330253 MPD | dbSNP | MGI SNP Detail | Chr11:22744783 | f | B3gnt2 : Intron | 1 | SNP | T | C | C/T | ||||||||||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs6330793 MPD | dbSNP | MGI SNP Detail | Chr11:22744862 | f | B3gnt2 : Intron | 1 | SNP | A | C | A/C | ||||||||||||||||||
| rs6331317 MPD | dbSNP | MGI SNP Detail | Chr11:22744959 | f | B3gnt2 : Intron | 1 | SNP | T | A | A/T | ||||||||||||||||||
| rs26858681 MPD | dbSNP | MGI SNP Detail | Chr11:22745293 | f | B3gnt2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | C | A | A/C | ||||||||||
| rs26858680 MPD | dbSNP | MGI SNP Detail | Chr11:22745333 | f | B3gnt2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | A/G | ||||||||||
| rs29400213 MPD | dbSNP | MGI SNP Detail | Chr11:22745712 | f | B3gnt2 : Intron | 1 | SNP | A | A | T | A/T | |||||||||||||||||
| rs26858679 MPD | dbSNP | MGI SNP Detail | Chr11:22745778 | f | B3gnt2 : Intron | 1 | SNP | C | C | C | G | C | C | C | C | G | C | C/G | ||||||||||
| rs26858678 MPD | dbSNP | MGI SNP Detail | Chr11:22746299 | f | B3gnt2 : Intron | 1 | SNP | A | A | A | A | A | A | G | A | A/G | ||||||||||||
| rs29454070 MPD | dbSNP | MGI SNP Detail | Chr11:22746309 | f | B3gnt2 : Intron | 1 | SNP | C | C | C | T | C/T | ||||||||||||||||
| rs26858677 MPD | dbSNP | MGI SNP Detail | Chr11:22746454 | f | B3gnt2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | C | A | A/C | ||||||||||
| rs29445327 MPD | dbSNP | MGI SNP Detail | Chr11:22746877 | f | B3gnt2 : Intron | 1 | SNP | C | T | C/T | ||||||||||||||||||
| rs26858676 MPD | dbSNP | MGI SNP Detail | Chr11:22747606 | f | B3gnt2 : Intron | 2 | SNP | T | T | T | T | C | T | C | T | T | T | C | C | C/T | ||||||||
| rs29394974 MPD | dbSNP | MGI SNP Detail | Chr11:22747985 | f | B3gnt2 : Intron | 1 | SNP | T | T | T | C | C/T | ||||||||||||||||
| rs29422122 MPD | dbSNP | MGI SNP Detail | Chr11:22748084 | f | B3gnt2 : Intron | 1 | SNP | C | C | C | T | C/T | ||||||||||||||||
| rs26858675 MPD | dbSNP | MGI SNP Detail | Chr11:22748836 | f | B3gnt2 : Intron | 1 | SNP | G | G | G | A | A | A | G | G | G | A/G | |||||||||||
| rs26858674 MPD | dbSNP | MGI SNP Detail | Chr11:22748910 | f | B3gnt2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | C/T | ||||||||
| rs26858673 MPD | dbSNP | MGI SNP Detail | Chr11:22750102 | f | B3gnt2 : Intron | 2 | SNP | A | A | A | A | G | A | G | G | A | A | A | A/G | |||||||||
| rs26858672 MPD | dbSNP | MGI SNP Detail | Chr11:22750760 | f | B3gnt2 : Intron | 2 | SNP | T | T | C | T | C | T | C | C | T | T | T | T | C/T | ||||||||
| rs26858671 MPD | dbSNP | MGI SNP Detail | Chr11:22751627 | f | B3gnt2 : Intron | 2 | SNP | G | G | G | C | G | C | G | G | C | C | G | G | G | G | G | G | C/G | ||||
| rs26858670 MPD | dbSNP | MGI SNP Detail | Chr11:22751895 | f | B3gnt2 : Intron | 2 | SNP | G | G | G | G | A | G | A | A | G | G | G | G | A/G | ||||||||
| rs29440053 MPD | dbSNP | MGI SNP Detail | Chr11:22752314 | f | B3gnt2 : Intron | 1 | SNP | G | G | G | C | C/G | ||||||||||||||||
| rs26858669 MPD | dbSNP | MGI SNP Detail | Chr11:22753725 | f | B3gnt2 : Intron | 1 | SNP | A | A | G | A | G | G | G | A | A | A | A | A/G | |||||||||
| rs26858668 MPD | dbSNP | MGI SNP Detail | Chr11:22754768 | f | B3gnt2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | A | A/G | |||||||
| rs6398470 MPD | dbSNP | MGI SNP Detail | Chr11:22754769 | f | B3gnt2 : Intron | 1 | SNP | A | C | A/C | ||||||||||||||||||
| rs6398976 MPD | dbSNP | MGI SNP Detail | Chr11:22754837 | f | B3gnt2 : Intron | 1 | SNP | T | C | C/T | ||||||||||||||||||
| rs26858667 MPD | dbSNP | MGI SNP Detail | Chr11:22754876 | f | B3gnt2 : Intron | 2 | SNP | A | A | C | A | C | A | C | C | A | A | A | A | A/C | ||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs6399137 MPD | dbSNP | MGI SNP Detail | Chr11:22754923 | f | B3gnt2 : Intron | 1 | SNP | T | C | C/T | ||||||||||||||||||
| rs6399140 MPD | dbSNP | MGI SNP Detail | Chr11:22754925 | f | B3gnt2 : Intron | 1 | SNP | C | A | A/C | ||||||||||||||||||
| rs6399536 MPD | dbSNP | MGI SNP Detail | Chr11:22754940 | f | B3gnt2 : Intron | 1 | SNP | A | T | A/T | ||||||||||||||||||
| rs6400128 MPD | dbSNP | MGI SNP Detail | Chr11:22755077 | f | B3gnt2 : Intron | 1 | SNP | T | C | C/T | ||||||||||||||||||
| rs6400130 MPD | dbSNP | MGI SNP Detail | Chr11:22755080 | f | B3gnt2 : Intron | 2 | SNP | T | T | T | C | C | C/T | |||||||||||||||
| rs29424632 MPD | dbSNP | MGI SNP Detail | Chr11:22755287 | f | B3gnt2 : Intron | 1 | SNP | C | C | C | T | C/T | ||||||||||||||||
| rs26858666 MPD | dbSNP | MGI SNP Detail | Chr11:22755685 | f | B3gnt2 : Intron | 2 | SNP | G | G | G | G | T | G | G | T | T | G | G | G | G | G | G | G/T | |||||
| rs29403899 MPD | dbSNP | MGI SNP Detail | Chr11:22756530 | f | B3gnt2 : Intron | 1 | SNP | A | A | C | A/C | |||||||||||||||||
| rs26858665 MPD | dbSNP | MGI SNP Detail | Chr11:22758192 | f | B3gnt2 : Intron | 2 | SNP | C | C | C | T | C | T | C | C | T | T | C | C | C | C | C | C | C/T | ||||
| rs29405071 MPD | dbSNP | MGI SNP Detail | Chr11:22762148 | f | B3gnt2 : Intron | 1 | SNP | A | A | A | A | T | A/T | |||||||||||||||
| rs29398504 MPD | dbSNP | MGI SNP Detail | Chr11:22762817 | f | B3gnt2 : Intron | 1 | SNP | T | T | T | C | C/T | ||||||||||||||||
| rs29430398 MPD | dbSNP | MGI SNP Detail | Chr11:22763007 | f | B3gnt2 : Intron | 1 | SNP | A | A | A | G | A/G | ||||||||||||||||
| rs29483146 MPD | dbSNP | MGI SNP Detail | Chr11:22764637 | f | B3gnt2 : Intron | 1 | SNP | G | G | G | A | A/G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/22/2013 MGI 5.13 |
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