About   Help   FAQ
Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
B3galt2
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
MGI:1349461

35 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs30564977
MPD | dbSNP | MGI SNP Detail
Chr1:143639566fB3galt2 : Locus-Region
Cdc73 : Intron
Tli1 : within coordinates of
4SNPAAGGGGG  GG GGGAAA AA/G
rs30981693
MPD | dbSNP | MGI SNP Detail
Chr1:143640993fB3galt2 : mRNA-UTR
Cdc73 : Intron
Tli1 : within coordinates of
2SNPG GAGG   GG GAGGGG GA/G
rs30981692
MPD | dbSNP | MGI SNP Detail
Chr1:143641146fB3galt2 : mRNA-UTR
Cdc73 : Intron
Tli1 : within coordinates of
2SNPC TTTT   TT TTTCCC CC/T
rs30981691
MPD | dbSNP | MGI SNP Detail
Chr1:143641544fB3galt2 : Intron
Cdc73 : Intron
Tli1 : within coordinates of
1SNPT TTTT   TT T TT T AA/T
rs32532282
MPD | dbSNP | MGI SNP Detail
Chr1:143641859fB3galt2 : Intron
Cdc73 : Intron
Tli1 : within coordinates of
1SNP GA   A  A          A/G
rs238465199
MPD | dbSNP | MGI SNP Detail
Chr1:143642340fB3galt2 : Intron
Cdc73 : Intron
Tli1 : within coordinates of
1SNP             A  T   A/T
rs260916859
MPD | dbSNP | MGI SNP Detail
Chr1:143642341fB3galt2 : Intron
Cdc73 : Intron
Tli1 : within coordinates of
1SNP             A  T   A/T
rs229325366
MPD | dbSNP | MGI SNP Detail
Chr1:143643569fB3galt2 : Intron
Cdc73 : Intron
Tli1 : within coordinates of
1SNP             G  A   A/G
rs30981690
MPD | dbSNP | MGI SNP Detail
Chr1:143643818fB3galt2 : Intron
Cdc73 : Intron
Tli1 : within coordinates of
1SNPA CAAC   AC   AA A AA/C
rs246550007
MPD | dbSNP | MGI SNP Detail
Chr1:143643938fB3galt2 : Intron
Cdc73 : Intron
Tli1 : within coordinates of
1SNP             A  G   A/G
rs31181411
MPD | dbSNP | MGI SNP Detail
Chr1:143644303fB3galt2 : Intron
Cdc73 : Intron
Tli1 : within coordinates of
2SNP TA   T  T          A/T
rs30981689
MPD | dbSNP | MGI SNP Detail
Chr1:143644771fB3galt2 : Intron
Cdc73 : Intron
Tli1 : within coordinates of
3SNPCCTTTT   TT TTTCCC CC/T
rs6195863
MPD | dbSNP | MGI SNP Detail
Chr1:143644924fB3galt2 : Intron
Cdc73 : Intron
Tli1 : within coordinates of
1SNP      C T           C/T
rs6197084
MPD | dbSNP | MGI SNP Detail
Chr1:143645166fB3galt2 : Intron
Cdc73 : Intron
Tli1 : within coordinates of
1SNP      A G           A/G
rs32057271
MPD | dbSNP | MGI SNP Detail
Chr1:143645329fB3galt2 : Intron
Cdc73 : Intron
Tli1 : within coordinates of
3SNPT     G  G   G  T   G/T
rs30981688
MPD | dbSNP | MGI SNP Detail
Chr1:143645832fB3galt2 : Intron
Cdc73 : Intron
Tli1 : within coordinates of
1SNPT TTTT   TT T TT T CC/T
rs30981687
MPD | dbSNP | MGI SNP Detail
Chr1:143646047fB3galt2 : mRNA-UTR
Cdc73 : Intron
Tli1 : within coordinates of
2SNPG AAAA   AA AAAGGG GA/G
rs30981686
MPD | dbSNP | MGI SNP Detail
Chr1:143646103fB3galt2 : mRNA-UTR
Cdc73 : Intron
Tli1 : within coordinates of
2SNPG AAAA   AA AAAGGG GA/G
rs30981685
MPD | dbSNP | MGI SNP Detail
Chr1:143646411fB3galt2 : Coding-NonSynonymous
Cdc73 : Intron
Tli1 : within coordinates of
1SNPT CCCC   CC C CT T CC/T
rs30981684
MPD | dbSNP | MGI SNP Detail
Chr1:143647285fB3galt2 : Coding-Synonymous
Cdc73 : Intron
Tli1 : within coordinates of
4SNPG AAAAA  AA AAAGGG GA/G
rs30980933
MPD | dbSNP | MGI SNP Detail
Chr1:143648381fB3galt2 : mRNA-UTR
Cdc73 : Intron
Tli1 : within coordinates of
2SNPT CCCC   CC CCCTTT TC/T
rs30980932
MPD | dbSNP | MGI SNP Detail
Chr1:143648537fB3galt2 : mRNA-UTR
Cdc73 : Intron
Tli1 : within coordinates of
1SNPG GGGG   GG G GG G AA/G
rs31448609
MPD | dbSNP | MGI SNP Detail
Chr1:143648734fB3galt2 : mRNA-UTR
Cdc73 : Intron
Tli1 : within coordinates of
3SNPTTC   C      C  T   C/T
rs32778485
MPD | dbSNP | MGI SNP Detail
Chr1:143648747fB3galt2 : mRNA-UTR
Cdc73 : Intron
Tli1 : within coordinates of
3SNPTTG   G      G  T   G/T
rs251657363
MPD | dbSNP | MGI SNP Detail
Chr1:143649217fB3galt2 : mRNA-UTR
Cdc73 : Intron
Tli1 : within coordinates of
1SNP             A  C   A/C
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs222212647
MPD | dbSNP | MGI SNP Detail
Chr1:143650121fB3galt2 : Locus-Region
Cdc73 : Intron
Tli1 : within coordinates of
1SNP             C  G   C/G
rs30980931
MPD | dbSNP | MGI SNP Detail
Chr1:143650246fB3galt2 : Locus-Region
Cdc73 : Intron
Tli1 : within coordinates of
1SNPA AAAA A AAGA AA AGAA/G
rs30980930
MPD | dbSNP | MGI SNP Detail
Chr1:143650286fB3galt2 : Locus-Region
Cdc73 : Intron
Tli1 : within coordinates of
1SNPT TTTT T TTTT TT TCTC/T
rs30980929
MPD | dbSNP | MGI SNP Detail
Chr1:143650361fB3galt2 : Locus-Region
Cdc73 : Intron
Tli1 : within coordinates of
4SNPC TTTTT  TTCTTTCCCCCC/T
rs30980928
MPD | dbSNP | MGI SNP Detail
Chr1:143650442fB3galt2 : 36 bp downstream of
Cdc73 : Intron
Tli1 : within coordinates of
1SNPC CCCC   CCCC CC CT C/T
rs30980927
MPD | dbSNP | MGI SNP Detail
Chr1:143650488fB3galt2 : 82 bp downstream of
Cdc73 : Intron
Tli1 : within coordinates of
4SNPG AAAAA  AAGAAAGGGGGA/G
rs220455818
MPD | dbSNP | MGI SNP Detail
Chr1:143651088fB3galt2 : 682 bp downstream of
Cdc73 : Intron
Tli1 : within coordinates of
1SNP             G  A   A/G
rs238329144
MPD | dbSNP | MGI SNP Detail
Chr1:143651137fB3galt2 : 731 bp downstream of
Cdc73 : Intron
Tli1 : within coordinates of
1SNP             G  A   A/G
rs30980926
MPD | dbSNP | MGI SNP Detail
Chr1:143651632fB3galt2 : 1226 bp downstream of
Cdc73 : Intron
Tli1 : within coordinates of
1SNPA AAAA   AAAA AA AGAA/G
rs30980925
MPD | dbSNP | MGI SNP Detail
Chr1:143651707fB3galt2 : 1301 bp downstream of
Cdc73 : Intron
Tli1 : within coordinates of
1SNPT TTTT   TTTT TT TATA/T

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/12/2014
MGI 5.19
The Jackson Laboratory