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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Best1 bestrophin 1 MGI:1346332 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs37638547 MPD | dbSNP | MGI SNP Detail | Chr19:10058031 | f | Best1 : Locus-Region Fth1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T | |||
| rs37844158 MPD | dbSNP | MGI SNP Detail | Chr19:10058252 | f | Best1 : Locus-Region Fth1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||
| rs31103712 MPD | dbSNP | MGI SNP Detail | Chr19:10058319 | f | Best1 : Locus-Region Fth1 : Intron | 2 | SNP | A | A | G | A | A | A | A | A | G | A | G | G | A/G | ||||||
| rs38493857 MPD | dbSNP | MGI SNP Detail | Chr19:10058356 | f | Best1 : Locus-Region Fth1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | |||
| rs30887988 MPD | dbSNP | MGI SNP Detail | Chr19:10058393 | f | Best1 : Locus-Region Fth1 : Intron | 2 | SNP | C | C | T | C | T | T | C | C | C | T | C | C | T | C | T | T | C/T | ||
| rs36837993 MPD | dbSNP | MGI SNP Detail | Chr19:10058520 | f | Best1 : Locus-Region Fth1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | |||
| rs38221512 MPD | dbSNP | MGI SNP Detail | Chr19:10058624 | f | Best1 : Locus-Region Fth1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | |||
| rs30418341 MPD | dbSNP | MGI SNP Detail | Chr19:10058650 | f | Best1 : Locus-Region Fth1 : Intron | 2 | SNP | A | A | G | A | G | G | A | A | A | A | A | A | A | A | A | A | A/G | ||
| rs37165062 MPD | dbSNP | MGI SNP Detail | Chr19:10058757 | f | Best1 : Locus-Region Fth1 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||
| rs36580256 MPD | dbSNP | MGI SNP Detail | Chr19:10058893 | f | Best1 : Locus-Region Fth1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | C | T | T | C/T | ||||
| rs37638533 MPD | dbSNP | MGI SNP Detail | Chr19:10058985 | f | Best1 : Locus-Region Fth1 : Intron | 1 | SNP | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T | ||||
| rs37483348 MPD | dbSNP | MGI SNP Detail | Chr19:10059028 | f | Best1 : Locus-Region Fth1 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | A | C | C | C | C | A | C | A/C | |||
| rs36396305 MPD | dbSNP | MGI SNP Detail | Chr19:10059297 | f | Best1 : Locus-Region Fth1 : Coding-Synonymous | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | C/T | |||
| rs36687182 MPD | dbSNP | MGI SNP Detail | Chr19:10059417 | f | Best1 : Locus-Region Fth1 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||
| rs4232051 MPD | dbSNP | MGI SNP Detail | Chr19:10059591 | r | Best1 : Locus-Region Fth1 : Locus-Region | 2 | SNP | A | A | A | A | A | A | C | A | A | C | A | A | A | A | A | C | A | A/C | |
| rs36424532 MPD | dbSNP | MGI SNP Detail | Chr19:10059640 | f | Best1 : Locus-Region Fth1 : Locus-Region | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | |||
| rs30909736 MPD | dbSNP | MGI SNP Detail | Chr19:10059767 | f | Best1 : mRNA-UTR Fth1 : Locus-Region | 2 | SNP | A | A | T | A | T | T | A | T | A | A | T | A | A | T | A | T | T | A/T | |
| rs36754406 MPD | dbSNP | MGI SNP Detail | Chr19:10059816 | f | Best1 : mRNA-UTR Fth1 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||
| rs37352726 MPD | dbSNP | MGI SNP Detail | Chr19:10060080 | f | Best1 : Intron Fth1 : Locus-Region | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | |||
| rs37992943 MPD | dbSNP | MGI SNP Detail | Chr19:10060155 | f | Best1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | A/G | |||||
| rs36895428 MPD | dbSNP | MGI SNP Detail | Chr19:10060229 | f | Best1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |||
| rs37339345 MPD | dbSNP | MGI SNP Detail | Chr19:10060230 | f | Best1 : Intron | 1 | SNP | T | T | T | T | A | T | T | T | T | T | T | A/T | |||||||
| rs36559887 MPD | dbSNP | MGI SNP Detail | Chr19:10060258 | f | Best1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C/G | |||
| rs37814930 MPD | dbSNP | MGI SNP Detail | Chr19:10060334 | f | Best1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |||
| rs36366997 MPD | dbSNP | MGI SNP Detail | Chr19:10060424 | f | Best1 : Intron | 1 | SNP | T | T | A | A | A | T | T | A | T | T | T | T | A | A | A/T | ||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs37475208 MPD | dbSNP | MGI SNP Detail | Chr19:10060461 | f | Best1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | C | T | C | T | C/T | |||
| rs36976974 MPD | dbSNP | MGI SNP Detail | Chr19:10060516 | f | Best1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A/G | ||||
| rs30418441 MPD | dbSNP | MGI SNP Detail | Chr19:10060897 | f | Best1 : Intron | 1 | SNP | G | T | T | G/T | |||||||||||||||
| rs30374863 MPD | dbSNP | MGI SNP Detail | Chr19:10061181 | f | Best1 : Coding-Synonymous | 1 | SNP | A | G | G | A/G | |||||||||||||||
| rs37709177 MPD | dbSNP | MGI SNP Detail | Chr19:10061615 | f | Best1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | |||
| rs36313066 MPD | dbSNP | MGI SNP Detail | Chr19:10061631 | f | Best1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||
| rs36711679 MPD | dbSNP | MGI SNP Detail | Chr19:10061664 | f | Best1 : Intron | 1 | SNP | G | G | G | G | G | C | G | G | C | G | G | C | G | C | G | C/G | |||
| rs36722305 MPD | dbSNP | MGI SNP Detail | Chr19:10061696 | f | Best1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G/T | |||
| rs37793701 MPD | dbSNP | MGI SNP Detail | Chr19:10062005 | f | Best1 : Intron | 1 | SNP | G | G | G | G | A | G | G | G | G | G | A | G | G | A/G | |||||
| rs30364314 MPD | dbSNP | MGI SNP Detail | Chr19:10062042 | f | Best1 : Intron | 2 | SNP | G | G | A | G | A | A | A | G | G | A | G | G | G | A | A/G | ||||
| rs37567561 MPD | dbSNP | MGI SNP Detail | Chr19:10062051 | f | Best1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C/T | ||||
| rs37028087 MPD | dbSNP | MGI SNP Detail | Chr19:10062295 | f | Best1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | |||
| rs31011661 MPD | dbSNP | MGI SNP Detail | Chr19:10062345 | f | Best1 : Intron | 1 | SNP | A | G | A | A | A/G | ||||||||||||||
| rs38188970 MPD | dbSNP | MGI SNP Detail | Chr19:10062515 | f | Best1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | G | C | C | C | C | C | C | C/G | |||
| rs36291100 MPD | dbSNP | MGI SNP Detail | Chr19:10062547 | f | Best1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | A | G | G | G | A/G | |||
| rs38631116 MPD | dbSNP | MGI SNP Detail | Chr19:10062657 | f | Best1 : Intron | 1 | SNP | T | T | T | T | C | T | T | T | T | T | T | T | T | C/T | |||||
| rs36956225 MPD | dbSNP | MGI SNP Detail | Chr19:10062723 | f | Best1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | C/T | |||
| rs36508740 MPD | dbSNP | MGI SNP Detail | Chr19:10062784 | f | Best1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||
| rs36448786 MPD | dbSNP | MGI SNP Detail | Chr19:10062786 | f | Best1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | A/C | |||
| rs36327751 MPD | dbSNP | MGI SNP Detail | Chr19:10062798 | f | Best1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | |||
| rs36603645 MPD | dbSNP | MGI SNP Detail | Chr19:10062832 | f | Best1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | A | C | C | C | A/C | |||
| rs30796202 MPD | dbSNP | MGI SNP Detail | Chr19:10063261 | f | Best1 : Intron | 1 | SNP | C | T | C | C | C/T | ||||||||||||||
| rs31186012 MPD | dbSNP | MGI SNP Detail | Chr19:10063482 | f | Best1 : Intron | 1 | SNP | A | G | A | A | A/G | ||||||||||||||
| rs30623474 MPD | dbSNP | MGI SNP Detail | Chr19:10063581 | f | Best1 : Intron | 1 | SNP | A | G | A | A | A/G | ||||||||||||||
| rs31032638 MPD | dbSNP | MGI SNP Detail | Chr19:10063589 | f | Best1 : Intron | 1 | SNP | C | T | C | C | C/T | ||||||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs31184463 MPD | dbSNP | MGI SNP Detail | Chr19:10063604 | f | Best1 : Intron | 1 | SNP | C | T | C | C | C/T | ||||||||||||||
| rs37982371 MPD | dbSNP | MGI SNP Detail | Chr19:10063677 | f | Best1 : Coding-Synonymous | 1 | SNP | C | C | C | T | C | C | T | C | C | C | C | T | C/T | ||||||
| rs30353275 MPD | dbSNP | MGI SNP Detail | Chr19:10063802 | f | Best1 : Intron | 2 | SNP | A | G | A | G | A | A | A | A | A | A | A | A | A | G | A/G | ||||
| rs31001898 MPD | dbSNP | MGI SNP Detail | Chr19:10063825 | f | Best1 : Intron | 1 | SNP | A | C | C | A/C | |||||||||||||||
| rs31150677 MPD | dbSNP | MGI SNP Detail | Chr19:10063870 | f | Best1 : Intron | 1 | SNP | A | C | C | A/C | |||||||||||||||
| rs30883323 MPD | dbSNP | MGI SNP Detail | Chr19:10063887 | f | Best1 : Intron | 1 | SNP | T | G | G | G/T | |||||||||||||||
| rs37794420 MPD | dbSNP | MGI SNP Detail | Chr19:10063914 | f | Best1 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G/T | |||
| rs31201391 MPD | dbSNP | MGI SNP Detail | Chr19:10064060 | f | Best1 : Intron | 2 | SNP | A | C | A | A | A | A | C | A | A | C | A | C | A/C | ||||||
| rs38164955 MPD | dbSNP | MGI SNP Detail | Chr19:10064210 | f | Best1 : Intron | 1 | SNP | G | G | G | A | G | G | G | G | G | G | G | G | A/G | ||||||
| rs37299244 MPD | dbSNP | MGI SNP Detail | Chr19:10064290 | f | Best1 : Intron | 1 | SNP | T | C | T | T | T | T | C | T | T | T | T | C | C | C/T | |||||
| rs30544171 MPD | dbSNP | MGI SNP Detail | Chr19:10064304 | f | Best1 : Intron | 1 | SNP | T | T | C | T | T | C/T | |||||||||||||
| rs30516805 MPD | dbSNP | MGI SNP Detail | Chr19:10064423 | f | Best1 : Intron | 2 | SNP | T | T | C | T | C | C | T | T | T | T | C | T | T | T | T | C | C | C/T | |
| rs30502537 MPD | dbSNP | MGI SNP Detail | Chr19:10064667 | f | Best1 : Intron | 2 | SNP | C | C | ? | C | C | C | C | C | G | C | C | C | C | G | C | C/G | |||
| rs30892306 MPD | dbSNP | MGI SNP Detail | Chr19:10064716 | f | Best1 : Intron | 2 | SNP | G | G | A | G | A | A | G | A | G | G | A | G | G | G | G | A | A | A/G | |
| rs36741508 MPD | dbSNP | MGI SNP Detail | Chr19:10064856 | f | Best1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||
| rs30415659 MPD | dbSNP | MGI SNP Detail | Chr19:10064868 | f | Best1 : Intron | 2 | SNP | C | C | T | C | T | T | T | C | C | C | C | C | C | C | C | T | C/T | ||
| rs36653169 MPD | dbSNP | MGI SNP Detail | Chr19:10065137 | f | Best1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | C/T | |||
| rs38376903 MPD | dbSNP | MGI SNP Detail | Chr19:10065187 | f | Best1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | A/C | |||
| rs31049088 MPD | dbSNP | MGI SNP Detail | Chr19:10065929 | f | Best1 : Intron | 1 | SNP | C | G | G | C/G | |||||||||||||||
| rs36681208 MPD | dbSNP | MGI SNP Detail | Chr19:10066053 | f | Best1 : Intron | 1 | SNP | T | T | T | T | T | T | G | T | T | T | T | G | G/T | ||||||
| rs36878032 MPD | dbSNP | MGI SNP Detail | Chr19:10066093 | f | Best1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C/G | |||
| rs30698357 MPD | dbSNP | MGI SNP Detail | Chr19:10066235 | f | Best1 : Intron | 1 | SNP | G | A | G | A/G | |||||||||||||||
| rs30849674 MPD | dbSNP | MGI SNP Detail | Chr19:10066239 | f | Best1 : Intron | 1 | SNP | G | C | G | C/G | |||||||||||||||
| rs30520408 MPD | dbSNP | MGI SNP Detail | Chr19:10066282 | f | Best1 : Intron | 2 | SNP | A | G | A | G | G | A | G | A | A | G | A | A | G | A | G | G | A/G | ||
| rs36551637 MPD | dbSNP | MGI SNP Detail | Chr19:10066423 | f | Best1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | T | G | G | G | G | T | G | G/T | |||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs30306318 MPD | dbSNP | MGI SNP Detail | Chr19:10066437 | f | Best1 : Intron | 1 | SNP | C | A | C | C | A/C | ||||||||||||||
| rs38540016 MPD | dbSNP | MGI SNP Detail | Chr19:10066466 | f | Best1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | |||
| rs37199038 MPD | dbSNP | MGI SNP Detail | Chr19:10066806 | f | Best1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||
| rs31137522 MPD | dbSNP | MGI SNP Detail | Chr19:10066834 | f | Best1 : Intron | 1 | SNP | G | T | G | G | G/T | ||||||||||||||
| rs30494096 MPD | dbSNP | MGI SNP Detail | Chr19:10066840 | f | Best1 : Intron | 1 | SNP | T | C | T | T | C/T | ||||||||||||||
| rs30849335 MPD | dbSNP | MGI SNP Detail | Chr19:10066907 | f | Best1 : Intron | 1 | SNP | G | A | G | A/G | |||||||||||||||
| rs30856631 MPD | dbSNP | MGI SNP Detail | Chr19:10066988 | f | Best1 : Intron | 1 | SNP | C | T | C | C | C/T | ||||||||||||||
| rs30504784 MPD | dbSNP | MGI SNP Detail | Chr19:10066999 | f | Best1 : Intron | 2 | SNP | A | A | G | A | A | A | A | G | A | A | A | A | A/G | ||||||
| rs38514593 MPD | dbSNP | MGI SNP Detail | Chr19:10067076 | f | Best1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | G | T | T | T | T | T | T | G/T | |||
| rs30852203 MPD | dbSNP | MGI SNP Detail | Chr19:10067200 | f | Best1 : Intron | 2 | SNP | C | C | T | C | T | T | C | T | C | C | C | C | C | C | C | C | T | C/T | |
| rs30312885 MPD | dbSNP | MGI SNP Detail | Chr19:10067244 | f | Best1 : Intron | 1 | SNP | G | A | G | G | A/G | ||||||||||||||
| rs36633190 MPD | dbSNP | MGI SNP Detail | Chr19:10067558 | f | Best1 : Intron | 1 | SNP | G | A | G | A | A | A | G | G | G | G | G | G | G | G | A | A/G | |||
| rs38535009 MPD | dbSNP | MGI SNP Detail | Chr19:10067826 | f | Best1 : Intron | 1 | SNP | G | A | G | A | A | A | G | G | G | G | G | G | G | G | A | A/G | |||
| rs37957527 MPD | dbSNP | MGI SNP Detail | Chr19:10067850 | f | Best1 : Intron | 1 | SNP | A | G | A | G | G | A | A | A | A | A | A | A | G | A/G | |||||
| rs36712278 MPD | dbSNP | MGI SNP Detail | Chr19:10067954 | f | Best1 : Intron | 1 | SNP | A | G | A | A | G | A | A | A | A | A | A/G | ||||||||
| rs31227733 MPD | dbSNP | MGI SNP Detail | Chr19:10068549 | f | Best1 : Intron | 1 | SNP | A | C | A/C | ||||||||||||||||
| rs31109713 MPD | dbSNP | MGI SNP Detail | Chr19:10068578 | f | Best1 : Intron | 1 | SNP | A | A | |||||||||||||||||
| rs36593102 MPD | dbSNP | MGI SNP Detail | Chr19:10069064 | f | Best1 : Intron | 1 | SNP | T | G | T | G | G | G | T | G | T | T | T | G | G | G/T | |||||
| rs36481725 MPD | dbSNP | MGI SNP Detail | Chr19:10069986 | f | Best1 : Intron | 1 | SNP | T | A | T | A | A | T | T | T | A | A | A/T | ||||||||
| rs38077005 MPD | dbSNP | MGI SNP Detail | Chr19:10070571 | f | Best1 : Intron | 1 | SNP | G | A | G | G | A | G | A | A | A | A | A | G | A/G | ||||||
| rs38409282 MPD | dbSNP | MGI SNP Detail | Chr19:10070641 | f | Best1 : Intron | 1 | SNP | T | G | T | T | G | T | G | G | G | G | T | G/T | |||||||
| rs39314884 MPD | dbSNP | MGI SNP Detail | Chr19:10071321 | f | Best1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | T | C | C/T | |||||||
| rs30741040 MPD | dbSNP | MGI SNP Detail | Chr19:10071787 | r | Best1 : Locus-Region | 2 | SNP | T | C | T | C | T | C | T | T | T | T | T | T | T | C | C/T | ||||
| rs37008404 MPD | dbSNP | MGI SNP Detail | Chr19:10071818 | f | Best1 : Locus-Region | 1 | SNP | A | G | A | G | G | A | A | A | G | A | G | G | A/G | ||||||
| rs30617243 MPD | dbSNP | MGI SNP Detail | Chr19:10071837 | r | Best1 : Locus-Region | 2 | SNP | C | T | C | T | C | C | C | C | C | C | C | C | C | C/T | |||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs36410139 MPD | dbSNP | MGI SNP Detail | Chr19:10071973 | f | Best1 : Locus-Region | 1 | SNP | G | A | G | A | A | G | G | G | G | G | G | G | G | A | A/G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/22/2013 MGI 5.13 |
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