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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Msh6 mutS homolog 6 (E. coli) MGI:1343961 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs45883876 MPD | dbSNP | MGI SNP Detail | Chr17:88373396 | f | Msh6 : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | T | A | A | A | A | A | A | A/T | |||
| rs46630454 MPD | dbSNP | MGI SNP Detail | Chr17:88373536 | f | Msh6 : Locus-Region | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | |||
| rs51735144 MPD | dbSNP | MGI SNP Detail | Chr17:88373606 | f | Msh6 : Locus-Region | 1 | SNP | T | C | T | C | C | T | C | C | T | C | C | C | C | C | C | C/T | |||
| rs49795785 MPD | dbSNP | MGI SNP Detail | Chr17:88373792 | f | Msh6 : Locus-Region | 1 | SNP | G | G | G | G | G | T | G | G | T | G | G | G | G | G | G | G/T | |||
| rs49630036 MPD | dbSNP | MGI SNP Detail | Chr17:88373814 | f | Msh6 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | A | G | G | G | G | G | G | A/G | ||||
| rs46142056 MPD | dbSNP | MGI SNP Detail | Chr17:88373852 | f | Msh6 : Locus-Region | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T | |||
| rs33683560 MPD | dbSNP | MGI SNP Detail | Chr17:88375113 | f | Msh6 : Intron | 2 | SNP | A | A | A | G | G | G | A/G | ||||||||||||
| rs6273990 MPD | dbSNP | MGI SNP Detail | Chr17:88381083 | f | Msh6 : Intron | 1 | SNP | T | C | C/T | ||||||||||||||||
| rs6275676 MPD | dbSNP | MGI SNP Detail | Chr17:88381374 | f | Msh6 : Intron | 1 | SNP | C | T | C/T | ||||||||||||||||
| rs50160825 MPD | dbSNP | MGI SNP Detail | Chr17:88384559 | f | Msh6 : Coding-Synonymous | 1 | SNP | G | A | G | G | A/G | ||||||||||||||
| rs46675469 MPD | dbSNP | MGI SNP Detail | Chr17:88385723 | f | Msh6 : Coding-Synonymous | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | C/T | ||||
| rs46745235 MPD | dbSNP | MGI SNP Detail | Chr17:88385861 | f | Msh6 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||
| rs47347550 MPD | dbSNP | MGI SNP Detail | Chr17:88385930 | f | Msh6 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||
| rs48786691 MPD | dbSNP | MGI SNP Detail | Chr17:88386026 | f | Msh6 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | G | C | C | G | C | C | C | C | C | C | C/G | |||
| rs51452109 MPD | dbSNP | MGI SNP Detail | Chr17:88386861 | f | Msh6 : Intron | 1 | SNP | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | G/T | |||
| rs47464016 MPD | dbSNP | MGI SNP Detail | Chr17:88386877 | f | Msh6 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | |||
| rs49030349 MPD | dbSNP | MGI SNP Detail | Chr17:88386921 | f | Msh6 : Intron | 1 | SNP | G | G | A | G | G | A | G | G | A | G | G | G | G | G | G | A/G | |||
| rs49551656 MPD | dbSNP | MGI SNP Detail | Chr17:88387055 | f | Msh6 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | G | G | A/G | |||
| rs46638269 MPD | dbSNP | MGI SNP Detail | Chr17:88387501 | f | Msh6 : Intron | 1 | SNP | A | A | A | A | A | C | A | A | A | A | A | A | A | A | A/C | ||||
| rs50523031 MPD | dbSNP | MGI SNP Detail | Chr17:88387551 | f | Msh6 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||
| rs45853504 MPD | dbSNP | MGI SNP Detail | Chr17:88387806 | f | Msh6 : Intron | 1 | SNP | T | T | C | T | T | T | T | T | T | T | T | T | T | T | T | C/T | |||
| rs50921371 MPD | dbSNP | MGI SNP Detail | Chr17:88387957 | f | Msh6 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | T | T | T | T | T | T | T | A/T | |||
| rs51525349 MPD | dbSNP | MGI SNP Detail | Chr17:88388124 | f | Msh6 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | |||
| rs46946376 MPD | dbSNP | MGI SNP Detail | Chr17:88388156 | f | Msh6 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | |||
| rs45783135 MPD | dbSNP | MGI SNP Detail | Chr17:88388437 | f | Fbxo11 : Locus-Region Msh6 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | |||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs51357085 MPD | dbSNP | MGI SNP Detail | Chr17:88388713 | f | Fbxo11 : Locus-Region Msh6 : Intron | 1 | SNP | A | A | G | A | A | G | A | A | G | A | A | A | A | A | A | A/G | |||
| rs49506573 MPD | dbSNP | MGI SNP Detail | Chr17:88388757 | f | Fbxo11 : Locus-Region Msh6 : Intron | 1 | SNP | C | C | C | C | T | C | C | T | C | C | C | C | C/T | ||||||
| rs50564205 MPD | dbSNP | MGI SNP Detail | Chr17:88389313 | f | Fbxo11 : Locus-Region Msh6 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T | |||
| rs50755447 MPD | dbSNP | MGI SNP Detail | Chr17:88389433 | f | Fbxo11 : Locus-Region Msh6 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||
| rs49896534 MPD | dbSNP | MGI SNP Detail | Chr17:88389577 | f | Fbxo11 : Locus-Region Msh6 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |||
| rs51326273 MPD | dbSNP | MGI SNP Detail | Chr17:88389717 | f | Fbxo11 : Locus-Region Msh6 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C/T | ||||
| rs46006706 MPD | dbSNP | MGI SNP Detail | Chr17:88389805 | f | Fbxo11 : Locus-Region Msh6 : Coding-NonSynonymous | 1 | SNP | G | G | A | G | G | G | G | G | G | G | G | G | G | G | G | A/G | |||
| rs51718862 MPD | dbSNP | MGI SNP Detail | Chr17:88389893 | f | Fbxo11 : Locus-Region Msh6 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C/T | |||
| rs48270216 MPD | dbSNP | MGI SNP Detail | Chr17:88389991 | f | Fbxo11 : Locus-Region Msh6 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C/T | |||||
| rs47162772 MPD | dbSNP | MGI SNP Detail | Chr17:88390136 | f | Fbxo11 : Locus-Region Msh6 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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