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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Adamts4 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 MGI:1339949 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs3656340 MPD | dbSNP | MGI SNP Detail | Chr1:173178579 | f | Adamts4 : Locus-Region | 3 | SNP | G | G | A | A | G | G | A | A | A | A | A | A | A | A | A | A | G | A/G | |
| rs3656951 MPD | dbSNP | MGI SNP Detail | Chr1:173178670 | f | Adamts4 : Locus-Region | 2 | SNP | C | C | C | T | C | C/T | |||||||||||||
| rs31540329 MPD | dbSNP | MGI SNP Detail | Chr1:173179731 | f | Adamts4 : Locus-Region | 1 | SNP | T | C | C | T | C | C | T | C/T | |||||||||||
| rs31540328 MPD | dbSNP | MGI SNP Detail | Chr1:173179860 | f | Adamts4 : Locus-Region | 1 | SNP | C | T | T | C | C | T | T | T | T | T | T | T | T | T | C | C/T | |||
| rs31540327 MPD | dbSNP | MGI SNP Detail | Chr1:173179997 | f | Adamts4 : Locus-Region | 1 | SNP | C | C | A | C | C | A | C | A | C | A | C | C | C | A/C | |||||
| rs31540326 MPD | dbSNP | MGI SNP Detail | Chr1:173180142 | f | Adamts4 : Locus-Region | 1 | SNP | G | A | G | G | G | G | G | A | G | G | G | G | G | A | G | A/G | |||
| rs31540325 MPD | dbSNP | MGI SNP Detail | Chr1:173180498 | f | Adamts4 : Locus-Region | 1 | SNP | T | C | C | T | T | C | C | C | C | C | C | C | C | C | C | C/T | |||
| rs31540324 MPD | dbSNP | MGI SNP Detail | Chr1:173180760 | f | Adamts4 : mRNA-UTR | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | T | G | G/T | |||
| rs31538643 MPD | dbSNP | MGI SNP Detail | Chr1:173180770 | f | Adamts4 : mRNA-UTR | 1 | SNP | G | A | A | G | G | A | A | A | A | A | A | A | A | A | G | A/G | |||
| rs31187691 MPD | dbSNP | MGI SNP Detail | Chr1:173180949 | f | Adamts4 : Coding-Synonymous | 2 | SNP | T | T | C | C | T | T | C | C | C | C | C | C | C | C | C | C | C | C/T | |
| rs31538642 MPD | dbSNP | MGI SNP Detail | Chr1:173181032 | f | Adamts4 : Coding-NonSynonymous | 2 | SNP | G | G | G | A | G | G | A | A | G | G | A | G | A | G | G | G | G | A/G | |
| rs31538641 MPD | dbSNP | MGI SNP Detail | Chr1:173181285 | f | Adamts4 : Coding-Synonymous | 2 | SNP | G | G | T | T | G | G | T | T | T | T | T | T | T | T | T | T | G | G/T | |
| rs30572535 MPD | dbSNP | MGI SNP Detail | Chr1:173181576 | f | Adamts4 : Coding-Synonymous | 2 | SNP | G | G | A | G | G | G | G | G | A | A | G | A | G | A | A | A | G | A/G | |
| rs31538640 MPD | dbSNP | MGI SNP Detail | Chr1:173181787 | f | Adamts4 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C/T | |||
| rs32607354 MPD | dbSNP | MGI SNP Detail | Chr1:173181836 | f | Adamts4 : Intron | 1 | SNP | A | A | C | A | A/C | ||||||||||||||
| rs31538639 MPD | dbSNP | MGI SNP Detail | Chr1:173182052 | f | Adamts4 : Intron | 2 | SNP | A | A | G | G | A | A | G | G | G | G | G | G | G | G | G | G | G | A/G | |
| rs31440484 MPD | dbSNP | MGI SNP Detail | Chr1:173182149 | f | Adamts4 : Intron | 1 | SNP | G | G | A | G | A/G | ||||||||||||||
| rs31497477 MPD | dbSNP | MGI SNP Detail | Chr1:173182461 | f | Adamts4 : Intron | 1 | SNP | T | A | A | A/T | |||||||||||||||
| rs31538638 MPD | dbSNP | MGI SNP Detail | Chr1:173182462 | f | Adamts4 : Intron | 2 | SNP | T | T | G | G | T | T | G | G | G | G | G | G | G | G | G | G | G/T | ||
| rs31538637 MPD | dbSNP | MGI SNP Detail | Chr1:173182587 | f | Adamts4 : Intron | 1 | SNP | G | G | A | G | G | A | G | G | A | G | A | G | G | A/G | |||||
| rs30668269 MPD | dbSNP | MGI SNP Detail | Chr1:173182778 | f | Adamts4 : Coding-Synonymous | 2 | SNP | C | C | T | C | C | T | C | C | C | T | C | C | C | C | C/T | ||||
| rs3689682 MPD | dbSNP | MGI SNP Detail | Chr1:173183055 | f | Adamts4 : Intron | 3 | SNP | T | T | T | C | T | T | C | C | T | T | C | T | C | T | T | T | T | C/T | |
| rs3689838 MPD | dbSNP | MGI SNP Detail | Chr1:173183125 | f | Adamts4 : Intron | 3 | SNP | C | C | C | T | C | C | T | T | C | C | T | C | T | C | C | C | C | C/T | |
| rs3691551 MPD | dbSNP | MGI SNP Detail | Chr1:173183367 | f | Adamts4 : Intron | 3 | SNP | A | A | G | G | A | A | G | G | G | G | G | G | G | G | G | G | G | A/G | |
| rs3691695 MPD | dbSNP | MGI SNP Detail | Chr1:173183437 | f | Adamts4 : Intron | 3 | SNP | T | T | ? | A | T | A | A | T | T | A | A | A | A | A | A/T | ||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs3705924 MPD | dbSNP | MGI SNP Detail | Chr1:173183443 | f | Adamts4 : Intron | 3 | SNP | T | T | ? | C | C | C | T | T | C | T | C | C | C | C/T | |||||
| rs3707671 MPD | dbSNP | MGI SNP Detail | Chr1:173183766 | f | Adamts4 : Intron | 3 | SNP | A | A | A | G | A | A | G | G | A | A | G | A | G | A | A | A | A | A/G | |
| rs3707738 MPD | dbSNP | MGI SNP Detail | Chr1:173183808 | f | Adamts4 : Intron | 3 | SNP | A | A | A | C | A | A | C | C | A | A | C | A | C | A | A | A | A | A/C | |
| rs32189684 MPD | dbSNP | MGI SNP Detail | Chr1:173183911 | f | Adamts4 : Intron | 1 | SNP | T | C | C | C | C/T | ||||||||||||||
| rs32478050 MPD | dbSNP | MGI SNP Detail | Chr1:173184253 | f | Adamts4 : Intron | 1 | SNP | T | T | C | C/T | |||||||||||||||
| rs31003203 MPD | dbSNP | MGI SNP Detail | Chr1:173184466 | f | Adamts4 : Intron | 2 | SNP | G | G | A | G | G | G | G | G | A | A | G | G | G | A | A | A | A | A/G | |
| rs31538636 MPD | dbSNP | MGI SNP Detail | Chr1:173184477 | f | Adamts4 : Intron | 2 | SNP | A | A | G | G | A | A | G | G | G | G | G | G | G | G | G | G | A/G | ||
| rs32421647 MPD | dbSNP | MGI SNP Detail | Chr1:173184572 | f | Adamts4 : Intron | 1 | SNP | T | C | C | C/T | |||||||||||||||
| rs31538635 MPD | dbSNP | MGI SNP Detail | Chr1:173185325 | f | Adamts4 : Intron | 1 | SNP | C | T | T | C | C | T | T | C | C | C | C | C/T | |||||||
| rs32067964 MPD | dbSNP | MGI SNP Detail | Chr1:173185424 | f | Adamts4 : Intron | 1 | SNP | A | T | A/T | ||||||||||||||||
| rs31306138 MPD | dbSNP | MGI SNP Detail | Chr1:173185807 | f | Adamts4 : Intron | 1 | SNP | C | C | T | C/T | |||||||||||||||
| rs32763708 MPD | dbSNP | MGI SNP Detail | Chr1:173185979 | f | Adamts4 : Intron | 1 | SNP | G | G | A | A | A/G | ||||||||||||||
| rs31538634 MPD | dbSNP | MGI SNP Detail | Chr1:173186090 | f | Adamts4 : Intron | 2 | SNP | C | C | C | T | C | C | T | T | C | C | T | T | C | C | C/T | ||||
| rs31442293 MPD | dbSNP | MGI SNP Detail | Chr1:173186094 | f | Adamts4 : Intron | 1 | SNP | A | A | A | T | A/T | ||||||||||||||
| rs31537833 MPD | dbSNP | MGI SNP Detail | Chr1:173186141 | f | Adamts4 : Intron | 1 | SNP | T | T | G | T | T | G | T | T | G | G | T | T | T | T | G/T | ||||
| rs31537832 MPD | dbSNP | MGI SNP Detail | Chr1:173186811 | f | Adamts4 : Coding-Synonymous | 1 | SNP | G | G | C | G | G | C | G | G | C | C | G | G | G | C/G | |||||
| rs31537831 MPD | dbSNP | MGI SNP Detail | Chr1:173186902 | f | Adamts4 : Intron | 1 | SNP | C | C | T | C | C | T | C | C | T | T | C | C | C | C | C/T | ||||
| rs31537830 MPD | dbSNP | MGI SNP Detail | Chr1:173187064 | f | Adamts4 : Intron | 1 | SNP | G | G | A | G | G | A | G | G | A | A | G | G | G | G | A/G | ||||
| rs31537829 MPD | dbSNP | MGI SNP Detail | Chr1:173187216 | f | Adamts4 : Coding-Synonymous | 1 | SNP | T | T | C | T | T | C | T | T | C | C | T | T | T | T | C/T | ||||
| rs31537828 MPD | dbSNP | MGI SNP Detail | Chr1:173187250 | f | Adamts4 : Coding-Synonymous | 1 | SNP | C | C | T | C | C | T | C | C | T | T | C | C | C/T | ||||||
| rs31537827 MPD | dbSNP | MGI SNP Detail | Chr1:173187299 | f | Adamts4 : Intron | 1 | SNP | C | C | G | C | C | G | C | C | G | G | C | C | C | C | C/G | ||||
| rs31537826 MPD | dbSNP | MGI SNP Detail | Chr1:173187551 | f | Adamts4 : Intron | 2 | SNP | C | C | T | C | C | T | T | C | C | T | T | C | C | C | C | C/T | |||
| rs31537825 MPD | dbSNP | MGI SNP Detail | Chr1:173187651 | f | Adamts4 : Intron | 2 | SNP | C | C | T | C | C | T | T | C | C | T | T | C | C | C | C | C/T | |||
| rs33888377 MPD | dbSNP | MGI SNP Detail | Chr1:173187722 | f | Adamts4 : Intron | 1 | SNP | G | C | C | C/G | |||||||||||||||
| rs33889423 MPD | dbSNP | MGI SNP Detail | Chr1:173187723 | f | Adamts4 : Intron | 1 | SNP | G | G | A | A/G | |||||||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs31537824 MPD | dbSNP | MGI SNP Detail | Chr1:173187766 | f | Adamts4 : Intron | 2 | SNP | C | C | T | C | C | T | T | C | C | T | T | T | C | C | C | C | C/T | ||
| rs30462815 MPD | dbSNP | MGI SNP Detail | Chr1:173188383 | f | Adamts4 : Intron | 2 | SNP | C | C | C | T | C | T | T | C | C | T | T | C | C | C | C | C/T | |||
| rs31747893 MPD | dbSNP | MGI SNP Detail | Chr1:173188569 | f | Adamts4 : Intron | 1 | SNP | G | A | G | A/G | |||||||||||||||
| rs31001124 MPD | dbSNP | MGI SNP Detail | Chr1:173188630 | f | Adamts4 : Intron | 1 | SNP | G | C | C/G | ||||||||||||||||
| rs32800047 MPD | dbSNP | MGI SNP Detail | Chr1:173188684 | f | Adamts4 : Intron | 1 | SNP | A | G | A | A/G | |||||||||||||||
| rs32011165 MPD | dbSNP | MGI SNP Detail | Chr1:173188831 | f | Adamts4 : Intron | 1 | SNP | C | A | C | A/C | |||||||||||||||
| rs31310692 MPD | dbSNP | MGI SNP Detail | Chr1:173188845 | f | Adamts4 : Intron | 2 | SNP | G | G | A | A | A | G | A | A | G | G | A/G | ||||||||
| rs31546013 MPD | dbSNP | MGI SNP Detail | Chr1:173189273 | f | Adamts4 : Coding-Synonymous | 2 | SNP | A | A | A | G | A | A | G | G | A | A | G | G | A | A | A | A | A/G | ||
| rs6241273 MPD | dbSNP | MGI SNP Detail | Chr1:173189540 | f | Adamts4 : mRNA-UTR | 1 | SNP | T | C | C/T | ||||||||||||||||
| rs31818213 MPD | dbSNP | MGI SNP Detail | Chr1:173189583 | f | Adamts4 : mRNA-UTR | 1 | SNP | A | A | G | A | A/G | ||||||||||||||
| rs31546012 MPD | dbSNP | MGI SNP Detail | Chr1:173190115 | f | Adamts4 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C/T | ||||
| rs31546011 MPD | dbSNP | MGI SNP Detail | Chr1:173190280 | f | Adamts4 : Locus-Region | 1 | SNP | A | A | G | A | A | G | A | A | G | G | A | A | A | A | A/G | ||||
| rs31546010 MPD | dbSNP | MGI SNP Detail | Chr1:173190296 | f | Adamts4 : Locus-Region | 1 | SNP | G | C | G | G | G | G | C | C | G | G | C | C | C | G | C/G | ||||
| rs31546009 MPD | dbSNP | MGI SNP Detail | Chr1:173190427 | f | Adamts4 : Locus-Region | 1 | SNP | G | G | A | G | G | A | G | G | A | A | G | G | A/G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/22/2013 MGI 5.13 |
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