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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Sema4a sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A MGI:107560 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs32886327 MPD | dbSNP | MGI SNP Detail | Chr3:88238585 | f | Sema4a : Locus-Region | 1 | SNP | T | T | T | T | C | T | T | T | T | T | T | C | C/T | ||||||
| rs30406480 MPD | dbSNP | MGI SNP Detail | Chr3:88238919 | f | Sema4a : Locus-Region | 2 | SNP | T | T | A | T | T | T | A | T | A | A | A | A | A | A | A/T | ||||
| rs32886332 MPD | dbSNP | MGI SNP Detail | Chr3:88238949 | f | Sema4a : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | T | A | A | A | A | A | A | A/T | |||
| rs32887034 MPD | dbSNP | MGI SNP Detail | Chr3:88239166 | f | Sema4a : Locus-Region | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | |||
| rs32887036 MPD | dbSNP | MGI SNP Detail | Chr3:88239246 | f | Sema4a : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A/C | ||||
| rs32887039 MPD | dbSNP | MGI SNP Detail | Chr3:88239275 | f | Sema4a : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | T | C | C/T | |||||||||
| rs32887041 MPD | dbSNP | MGI SNP Detail | Chr3:88239701 | f | Sema4a : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C/T | ||||
| rs32887043 MPD | dbSNP | MGI SNP Detail | Chr3:88239749 | f | Sema4a : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | A | G | A/G | ||||
| rs32887846 MPD | dbSNP | MGI SNP Detail | Chr3:88239816 | f | Sema4a : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C/T | |||||
| rs32887848 MPD | dbSNP | MGI SNP Detail | Chr3:88240147 | f | Sema4a : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | G | A | G | G | G | G | G | A/G | |||||
| rs32887851 MPD | dbSNP | MGI SNP Detail | Chr3:88240280 | f | Sema4a : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||
| rs32888744 MPD | dbSNP | MGI SNP Detail | Chr3:88240373 | f | Sema4a : mRNA-UTR | 1 | SNP | T | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | ||||
| rs13467770 MPD | dbSNP | MGI SNP Detail | Chr3:88240894 | r | Sema4a : Coding-Synonymous | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||
| rs13467768 MPD | dbSNP | MGI SNP Detail | Chr3:88241055 | r | Sema4a : Coding-NonSynonymous | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | A/G | ||||
| rs32888751 MPD | dbSNP | MGI SNP Detail | Chr3:88241082 | f | Sema4a : Coding-NonSynonymous | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | T | C/T | |||
| rs32888753 MPD | dbSNP | MGI SNP Detail | Chr3:88241384 | f | Sema4a : Intron | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | ||||
| rs32889675 MPD | dbSNP | MGI SNP Detail | Chr3:88241513 | f | Sema4a : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||
| rs32889678 MPD | dbSNP | MGI SNP Detail | Chr3:88241585 | f | Sema4a : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C/T | ||||
| rs32889681 MPD | dbSNP | MGI SNP Detail | Chr3:88242345 | f | Sema4a : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | T | C/T | |||
| rs32890494 MPD | dbSNP | MGI SNP Detail | Chr3:88242440 | f | Sema4a : Coding-Synonymous | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | G | G | A/G | ||||
| rs32890497 MPD | dbSNP | MGI SNP Detail | Chr3:88242479 | f | Sema4a : Coding-Synonymous | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | T | C/T | |||||
| rs32890499 MPD | dbSNP | MGI SNP Detail | Chr3:88242531 | f | Sema4a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||
| rs32890502 MPD | dbSNP | MGI SNP Detail | Chr3:88243004 | f | Sema4a : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G/T | |||
| rs32891384 MPD | dbSNP | MGI SNP Detail | Chr3:88243353 | f | Sema4a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | A/C | |||
| rs32891387 MPD | dbSNP | MGI SNP Detail | Chr3:88243710 | f | Sema4a : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | G | A/G | ||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs32891389 MPD | dbSNP | MGI SNP Detail | Chr3:88244473 | f | Sema4a : Intron | 1 | SNP | A | A | A | A | A | C | A | A | C | A | A | A | A | C | C | A/C | |||
| rs32891392 MPD | dbSNP | MGI SNP Detail | Chr3:88244617 | f | Sema4a : Intron | 1 | SNP | T | T | T | T | C | T | C | T | T | T | T | C | C/T | ||||||
| rs32892165 MPD | dbSNP | MGI SNP Detail | Chr3:88245190 | f | Sema4a : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | G | A/G | |||
| rs32892168 MPD | dbSNP | MGI SNP Detail | Chr3:88245338 | f | Sema4a : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | C | C | C/T | |||
| rs30007832 MPD | dbSNP | MGI SNP Detail | Chr3:88245819 | f | Sema4a : Intron | 1 | SNP | T | C | T | C | C/T | ||||||||||||||
| rs32892171 MPD | dbSNP | MGI SNP Detail | Chr3:88245845 | f | Sema4a : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A/G | |||
| rs32892694 MPD | dbSNP | MGI SNP Detail | Chr3:88246069 | f | Sema4a : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | T | C/T | ||||
| rs32892697 MPD | dbSNP | MGI SNP Detail | Chr3:88246468 | f | Sema4a : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||
| rs32892699 MPD | dbSNP | MGI SNP Detail | Chr3:88246923 | f | Sema4a : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||
| rs32886296 MPD | dbSNP | MGI SNP Detail | Chr3:88251789 | f | Sema4a : Intron | 1 | SNP | T | T | T | T | T | G | T | T | T | T | T | T | T | G | G | G/T | |||
| rs32886298 MPD | dbSNP | MGI SNP Detail | Chr3:88251825 | f | Sema4a : Intron | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | A | C | A/C | ||||
| rs6306365 MPD | dbSNP | MGI SNP Detail | Chr3:88252234 | f | Sema4a : Intron | 1 | SNP | A | G | A/G | ||||||||||||||||
| rs32886301 MPD | dbSNP | MGI SNP Detail | Chr3:88253242 | f | Sema4a : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | C | C/T | ||||||
| rs32887044 MPD | dbSNP | MGI SNP Detail | Chr3:88254306 | f | Sema4a : Intron | 1 | SNP | T | T | T | T | C | T | T | T | T | C | C | C/T | |||||||
| rs32887047 MPD | dbSNP | MGI SNP Detail | Chr3:88254448 | f | Sema4a : Coding-Synonymous | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | A | G | A/G | |||
| rs32887049 MPD | dbSNP | MGI SNP Detail | Chr3:88254740 | f | Sema4a : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | A/G | |||||
| rs32887052 MPD | dbSNP | MGI SNP Detail | Chr3:88255833 | f | Sema4a : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | ||||
| rs32887885 MPD | dbSNP | MGI SNP Detail | Chr3:88257081 | f | Sema4a : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | C | A/C | |||||||
| rs32887888 MPD | dbSNP | MGI SNP Detail | Chr3:88258122 | f | Sema4a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | T | C | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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