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Mouse SNPs
Query Results -- Summary
Genome Coordinate Discrepancy
The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details).
 Symbol
Name
ID
Taf1
TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor
MGI:1336878

112 matching SNPs displayed


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs29080530
MPD | dbSNP | MGI SNP Detail
ChrX:98727801fTaf1 : Locus-Region1SNPAAAAA  A TAAAATAA/T
rs29080529
MPD | dbSNP | MGI SNP Detail
ChrX:98727975fTaf1 : Locus-Region1SNPGGGGG  GGCGGGGCGC/G
rs29080528
MPD | dbSNP | MGI SNP Detail
ChrX:98728468fTaf1 : Intron1SNP GGGG  GGTGGGGTTG/T
rs29080527
MPD | dbSNP | MGI SNP Detail
ChrX:98728596fTaf1 : Intron1SNPTTTTT  TTTTTCTTTC/T
rs31828817
MPD | dbSNP | MGI SNP Detail
ChrX:98729577fTaf1 : Intron1SNPGGGGG GGGAGGGGAGA/G
rs29080526
MPD | dbSNP | MGI SNP Detail
ChrX:98730605fTaf1 : Intron1SNPCCCCC TCC CCCCTCC/T
rs29080525
MPD | dbSNP | MGI SNP Detail
ChrX:98730768fTaf1 : Intron1SNPGGGGG GGGAGGGGAGA/G
rs29080524
MPD | dbSNP | MGI SNP Detail
ChrX:98732134fTaf1 : Intron1SNPGGGGG AGGGGGGGGGA/G
rs29080033
MPD | dbSNP | MGI SNP Detail
ChrX:98732602fTaf1 : Intron1SNPAAAAA  AA AAAA TA/T
rs29080032
MPD | dbSNP | MGI SNP Detail
ChrX:98734404fTaf1 : Intron1SNPTTTTT CTTCTTTTCCC/T
rs29080031
MPD | dbSNP | MGI SNP Detail
ChrX:98734585fTaf1 : Intron1SNPGGGGG GGGGGGGGGAA/G
rs31828816
MPD | dbSNP | MGI SNP Detail
ChrX:98735168fTaf1 : Intron1SNPGGGGG CGGGG GGGGC/G
rs29080030
MPD | dbSNP | MGI SNP Detail
ChrX:98735406fTaf1 : Intron1SNPGGGGG GGGTGGGGTGG/T
rs29080029
MPD | dbSNP | MGI SNP Detail
ChrX:98735753fTaf1 : Intron1SNPCCCCC CCCTCCCCTCC/T
rs29080028
MPD | dbSNP | MGI SNP Detail
ChrX:98735998fTaf1 : Intron1SNPCCCCC CCCCCCCCTCC/T
rs29080027
MPD | dbSNP | MGI SNP Detail
ChrX:98736508fTaf1 : Intron1SNPCCCCC TCCTCCCCTTC/T
rs29080026
MPD | dbSNP | MGI SNP Detail
ChrX:98737909fTaf1 : Coding-NonSynonymous1SNPGGGGG GGGAGGGGAGA/G
rs29080025
MPD | dbSNP | MGI SNP Detail
ChrX:98738616fTaf1 : Intron1SNPAAAAA AAAGAAAAGAA/G
rs29080024
MPD | dbSNP | MGI SNP Detail
ChrX:98738656fTaf1 : Intron1SNPTTTTT TTTCTTTTCTC/T
rs29079583
MPD | dbSNP | MGI SNP Detail
ChrX:98739261fTaf1 : Intron1SNPGGGGG GGGAGGGGAGA/G
rs29079582
MPD | dbSNP | MGI SNP Detail
ChrX:98739301fTaf1 : Coding-Synonymous1SNPTTTTT TTTGTTTTGTG/T
rs29079581
MPD | dbSNP | MGI SNP Detail
ChrX:98739585fTaf1 : Intron1SNPGGGGG GGGCGGGGCGC/G
rs31828815
MPD | dbSNP | MGI SNP Detail
ChrX:98739650fTaf1 : Intron1SNPTTTT  CTT T TT TC/T
rs31828814
MPD | dbSNP | MGI SNP Detail
ChrX:98740534fTaf1 : Intron1SNPAAAAA GAAAAAAAAAA/G
rs29079580
MPD | dbSNP | MGI SNP Detail
ChrX:98741628fTaf1 : Intron1SNPGGGGG GGGAGGGGAGA/G
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs29079579
MPD | dbSNP | MGI SNP Detail
ChrX:98741716fTaf1 : Intron1SNPTTTTT CTT TTTTCCC/T
rs29079578
MPD | dbSNP | MGI SNP Detail
ChrX:98742232fTaf1 : Intron1SNPTTTTT TTTCTTTTCTC/T
rs29079577
MPD | dbSNP | MGI SNP Detail
ChrX:98742625fTaf1 : Intron1SNPTTTTT TTTCTTTTCTC/T
rs31828193
MPD | dbSNP | MGI SNP Detail
ChrX:98742903fTaf1 : Intron1SNPAAAAA CAAAAAAAAAA/C
rs29079576
MPD | dbSNP | MGI SNP Detail
ChrX:98743405fTaf1 : Intron1SNPCCCCC GCCGCCCCGGC/G
rs29079575
MPD | dbSNP | MGI SNP Detail
ChrX:98743851fTaf1 : Coding-Synonymous1SNPGGGGG GGGGGGGGGTG/T
rs29079303
MPD | dbSNP | MGI SNP Detail
ChrX:98747489fTaf1 : Intron1SNPCCCCC CCCTC CCTCC/T
rs31828192
MPD | dbSNP | MGI SNP Detail
ChrX:98747805fTaf1 : Coding-NonSynonymous1SNPGGGGG GGGGGGGGAGA/G
rs31828191
MPD | dbSNP | MGI SNP Detail
ChrX:98747958fTaf1 : Intron1SNPTTTTT CTTTTTTTTTC/T
rs29079302
MPD | dbSNP | MGI SNP Detail
ChrX:98748758fTaf1 : Intron1SNPAAAAA AAATAAAATAA/T
rs31828190
MPD | dbSNP | MGI SNP Detail
ChrX:98748843fTaf1 : Intron1SNPAAAAA AA GAAAAGAA/G
rs29079301
MPD | dbSNP | MGI SNP Detail
ChrX:98749789fTaf1 : Intron1SNPCCCCC CCCCCCCCCTC/T
rs31828189
MPD | dbSNP | MGI SNP Detail
ChrX:98752213fTaf1 : Coding-Synonymous1SNPAAAAA AAAAAAAACAA/C
rs29079300
MPD | dbSNP | MGI SNP Detail
ChrX:98752339fTaf1 : Intron1SNPTTTTT TTTATTTTATA/T
rs29079299
MPD | dbSNP | MGI SNP Detail
ChrX:98752591fTaf1 : Coding-Synonymous1SNPGGGGG GGGAGGGGAGA/G
rs31828188
MPD | dbSNP | MGI SNP Detail
ChrX:98752775fTaf1 : Intron1SNPCCCCC CCCGCCCCGCC/G
rs29079298
MPD | dbSNP | MGI SNP Detail
ChrX:98754316fTaf1 : Intron1SNPCCCCC CCCCCCCCCTC/T
rs29079297
MPD | dbSNP | MGI SNP Detail
ChrX:98755228fTaf1 : Coding-Synonymous1SNPGGGGG GGGAGGGGAAA/G
rs29079296
MPD | dbSNP | MGI SNP Detail
ChrX:98755313fTaf1 : Intron1SNPAAAAA GAAGAAAAGGA/G
rs29079295
MPD | dbSNP | MGI SNP Detail
ChrX:98755343fTaf1 : Intron1SNPCCCCC GCCGCCCCGCC/G
rs29079294
MPD | dbSNP | MGI SNP Detail
ChrX:98755498fTaf1 : Intron1SNPGGGGG GGGGGGGGGAA/G
rs29083881
MPD | dbSNP | MGI SNP Detail
ChrX:98755529fTaf1 : Intron1SNPGGGGG GGGAGGGGAGA/G
rs29083880
MPD | dbSNP | MGI SNP Detail
ChrX:98756335fTaf1 : Intron1SNPCCCCC CCCCCCCCCTC/T
rs29083879
MPD | dbSNP | MGI SNP Detail
ChrX:98756374fTaf1 : Intron1SNPCCCCC CCCTCCCCTCC/T
rs29083878
MPD | dbSNP | MGI SNP Detail
ChrX:98758264fTaf1 : Coding-Synonymous1SNPAAAAA AAAGAAAAGAA/G
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs29083877
MPD | dbSNP | MGI SNP Detail
ChrX:98759295fTaf1 : Intron1SNPCCCCC TCCTCCCCTTC/T
rs29083876
MPD | dbSNP | MGI SNP Detail
ChrX:98759575fTaf1 : Intron1SNPGGGGG GGGAGGGGAGA/G
rs29083875
MPD | dbSNP | MGI SNP Detail
ChrX:98761740fTaf1 : Intron1SNPCCCCC  CCTCCCCTCC/T
rs29083874
MPD | dbSNP | MGI SNP Detail
ChrX:98762708fTaf1 : Intron1SNPGGGGG  GGAGGGGAAA/G
rs29083763
MPD | dbSNP | MGI SNP Detail
ChrX:98762910fTaf1 : Intron1SNPTTTTT  TTCTTTT TC/T
rs31828187
MPD | dbSNP | MGI SNP Detail
ChrX:98763953fTaf1 : Intron1SNPCCCCC  CCCCCCCTCC/T
rs29083762
MPD | dbSNP | MGI SNP Detail
ChrX:98765047fTaf1 : Intron1SNPGGGGG  GGTGGGGTGG/T
rs29083761
MPD | dbSNP | MGI SNP Detail
ChrX:98765979fTaf1 : Intron1SNPCCCCC  CCCCCCCCGC/G
rs29083760
MPD | dbSNP | MGI SNP Detail
ChrX:98766144fTaf1 : Intron1SNPTTTTT  TTCTTTTCCC/T
rs29083759
MPD | dbSNP | MGI SNP Detail
ChrX:98767232fTaf1 : Intron1SNPCCCCC CCCTCCCCTCC/T
rs29083758
MPD | dbSNP | MGI SNP Detail
ChrX:98767329fTaf1 : Intron1SNPCCCCC CCCCCCCCCTC/T
rs29083757
MPD | dbSNP | MGI SNP Detail
ChrX:98768138fTaf1 : Intron1SNPTTTTT TTTATTTTATA/T
rs31828186
MPD | dbSNP | MGI SNP Detail
ChrX:98768370fTaf1 : Intron1SNPCCCCC CCCTCCCCTCC/T
rs29083756
MPD | dbSNP | MGI SNP Detail
ChrX:98769262fTaf1 : Intron1SNP AA    AA    A GA/G
rs31828185
MPD | dbSNP | MGI SNP Detail
ChrX:98769763fTaf1 : Intron1SNPGGGGG AGGAGGGGAAA/G
rs29083755
MPD | dbSNP | MGI SNP Detail
ChrX:98771272fTaf1 : Intron1SNPAAAAA AAAAAAAAATA/T
rs29083754
MPD | dbSNP | MGI SNP Detail
ChrX:98771475fTaf1 : Intron1SNPTTTTT GTTGTTTTGGG/T
rs31828184
MPD | dbSNP | MGI SNP Detail
ChrX:98771514fTaf1 : Intron1SNPGGGGG GGGGGGGGTGG/T
rs31827313
MPD | dbSNP | MGI SNP Detail
ChrX:98771570fTaf1 : Intron1SNPGGGGG GGGGGGGGCGC/G
rs29083343
MPD | dbSNP | MGI SNP Detail
ChrX:98771637fTaf1 : Intron1SNPCCCCC CCCCCCCCCTC/T
rs29083342
MPD | dbSNP | MGI SNP Detail
ChrX:98771671fTaf1 : Intron1SNPAAAAA AAAAAAAAACA/C
rs29083341
MPD | dbSNP | MGI SNP Detail
ChrX:98773426fTaf1 : Intron1SNPTTTTT TTTCTTTTCTC/T
rs29083340
MPD | dbSNP | MGI SNP Detail
ChrX:98774327fTaf1 : Intron1SNPCCCCC CCCCC CCCTC/T
rs29083339
MPD | dbSNP | MGI SNP Detail
ChrX:98776817fTaf1 : Intron1SNPCCCCC CC TCCCCTCC/T
rs29083338
MPD | dbSNP | MGI SNP Detail
ChrX:98777141fTaf1 : Intron1SNPTTTTT ATTATTTTAAA/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs31827312
MPD | dbSNP | MGI SNP Detail
ChrX:98777236fTaf1 : Intron1SNPCCCCC TCCCCCCCCCC/T
rs29083337
MPD | dbSNP | MGI SNP Detail
ChrX:98777632fTaf1 : Intron1SNP AAAA GA GAAAAGGA/G
rs29083336
MPD | dbSNP | MGI SNP Detail
ChrX:98783570fTaf1 : Intron1SNPAAAAA GAAGAAAAGGA/G
rs31827311
MPD | dbSNP | MGI SNP Detail
ChrX:98784035fTaf1 : Intron1SNPGGCGG CGGCGGGGC C/G
rs29083335
MPD | dbSNP | MGI SNP Detail
ChrX:98785731fTaf1 : Intron1SNPGGGGG GGGGGGGGGAA/G
rs29083334
MPD | dbSNP | MGI SNP Detail
ChrX:98786221fTaf1 : Intron1SNPAAAAA GAAGAAAAGGA/G
rs29082773
MPD | dbSNP | MGI SNP Detail
ChrX:98786870fTaf1 : Intron1SNPCCCCC CCCTCCCCTTC/T
rs29082772
MPD | dbSNP | MGI SNP Detail
ChrX:98787292fTaf1 : Intron1SNPGGGGG GGGAGGGGAGA/G
rs29082771
MPD | dbSNP | MGI SNP Detail
ChrX:98788621fTaf1 : Intron1SNPAAAAA GAAGAAAA GA/G
rs29082770
MPD | dbSNP | MGI SNP Detail
ChrX:98789466fTaf1 : Intron1SNPGGGGG AGGGGGGGGGA/G
rs29082769
MPD | dbSNP | MGI SNP Detail
ChrX:98789556fTaf1 : Intron1SNPGGGGG GGGGGGGGGTG/T
rs31246297
MPD | dbSNP | MGI SNP Detail
ChrX:98790115fTaf1 : Intron1SNP T   T T        T
rs29082768
MPD | dbSNP | MGI SNP Detail
ChrX:98790126fTaf1 : Intron1SNPGGGGG GGGAGGGGAGA/G
rs29082767
MPD | dbSNP | MGI SNP Detail
ChrX:98790310fTaf1 : Intron1SNPGGGGG GGGAGGGGGGA/G
rs29082766
MPD | dbSNP | MGI SNP Detail
ChrX:98790553fTaf1 : Intron1SNPGGGGG AGGAGGGGAAA/G
rs29082765
MPD | dbSNP | MGI SNP Detail
ChrX:98790770fTaf1 : Coding-Synonymous1SNPCCCCC CCCTCCCCTCC/T
rs31827310
MPD | dbSNP | MGI SNP Detail
ChrX:98790863fTaf1 : Intron1SNP AA A AAATA AATAA/T
rs31827309
MPD | dbSNP | MGI SNP Detail
ChrX:98790979fTaf1 : Intron1SNPGGGGG AGGGGGGGGGA/G
rs31827308
MPD | dbSNP | MGI SNP Detail
ChrX:98791035fTaf1 : Intron1SNPAAAAA GAAGAAAAGGA/G
rs29082764
MPD | dbSNP | MGI SNP Detail
ChrX:98791132fTaf1 : Intron1SNPAAAAA  A GA AAGGA/G
rs29082203
MPD | dbSNP | MGI SNP Detail
ChrX:98792023fTaf1 : Intron1SNPAAAAA AAAAAAAAAGA/G
rs29082202
MPD | dbSNP | MGI SNP Detail
ChrX:98792037fTaf1 : Intron1SNPGGGGG GGGAGGGGAGA/G
rs31827307
MPD | dbSNP | MGI SNP Detail
ChrX:98792080fTaf1 : Intron1SNPAAAAA GAAAAAAAAAA/G
rs29082201
MPD | dbSNP | MGI SNP Detail
ChrX:98792814fTaf1 : Intron1SNPCCCCC CCCCCCCCCTC/T
rs31827306
MPD | dbSNP | MGI SNP Detail
ChrX:98792971fTaf1 : Intron1SNPCCCCC TCC CCCC CC/T
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs31827305
MPD | dbSNP | MGI SNP Detail
ChrX:98793007fTaf1 : Intron1SNPGGGGG CGG GGGG GC/G
rs31827304
MPD | dbSNP | MGI SNP Detail
ChrX:98793414fTaf1 : Intron1SNPTTTTT CTTTTTTTTTC/T
rs29082200
MPD | dbSNP | MGI SNP Detail
ChrX:98793428fTaf1 : Intron1SNPAAAAA AAATAAAATAA/T
rs29082199
MPD | dbSNP | MGI SNP Detail
ChrX:98794258fTaf1 : Intron1SNPCCCCC CCCTCCCCTCC/T
rs29082198
MPD | dbSNP | MGI SNP Detail
ChrX:98794624fTaf1 : Intron1SNPGGGGG GGGGGGGGGAA/G
rs31834498
MPD | dbSNP | MGI SNP Detail
ChrX:98794638fTaf1 : Intron1SNPCCCCC GCCCC CCCCC/G
rs29082197
MPD | dbSNP | MGI SNP Detail
ChrX:98795122fTaf1 : mRNA-UTR1SNPCCCCC TCCCCCCCCCC/T
rs29082196
MPD | dbSNP | MGI SNP Detail
ChrX:98795586fTaf1 : mRNA-UTR1SNPTTTTT TTTTTTTTTCC/T
rs29082195
MPD | dbSNP | MGI SNP Detail
ChrX:98795629fTaf1 : mRNA-UTR1SNPAAAAA AAAGAAAAGAA/G
rs29082194
MPD | dbSNP | MGI SNP Detail
ChrX:98797082fTaf1 : mRNA-UTR1SNPAAAAA AAA AAAA GA/G
rs29081683
MPD | dbSNP | MGI SNP Detail
ChrX:98797326fTaf1 : Locus-Region1SNPAAAAA AAAGAAAAGAA/G
rs29081682
MPD | dbSNP | MGI SNP Detail
ChrX:98797579fTaf1 : Locus-Region1SNPGGGGG CGGCGGGGCCC/G

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last database update
05/08/2013
MGI 5.13
The Jackson Laboratory