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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Cx3cr1 chemokine (C-X3-C) receptor 1 MGI:1333815 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs33434613 MPD | dbSNP | MGI SNP Detail | Chr9:119955859 | f | Cx3cr1 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | T | C | T | C | C | T | C | C/T | |||
| rs29592123 MPD | dbSNP | MGI SNP Detail | Chr9:119955929 | f | Cx3cr1 : Locus-Region | 2 | SNP | T | T | T | C | T | T | C | C | T | C | T | C | T | T | C | T | C/T | ||
| rs33435406 MPD | dbSNP | MGI SNP Detail | Chr9:119955983 | f | Cx3cr1 : Locus-Region | 1 | SNP | T | T | T | T | T | A | T | T | A | T | A | T | T | A | T | A/T | |||
| rs33435408 MPD | dbSNP | MGI SNP Detail | Chr9:119956153 | f | Cx3cr1 : Locus-Region | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | |||
| rs33435410 MPD | dbSNP | MGI SNP Detail | Chr9:119956615 | f | Cx3cr1 : Locus-Region | 1 | SNP | A | C | A | C | C | C | A | C | A | A | A | A | A | A | C | A/C | |||
| rs33435412 MPD | dbSNP | MGI SNP Detail | Chr9:119956697 | f | Cx3cr1 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | T | C | T | C | C | T | C | C/T | |||
| rs33436294 MPD | dbSNP | MGI SNP Detail | Chr9:119956701 | f | Cx3cr1 : Locus-Region | 1 | SNP | T | G | T | G | G | T | T | G | T | T | T | T | T | T | G | G/T | |||
| rs33436296 MPD | dbSNP | MGI SNP Detail | Chr9:119956746 | f | Cx3cr1 : Locus-Region | 1 | SNP | C | T | C | T | T | C | C | T | C | C | C | C | C | C | T | C/T | |||
| rs33436298 MPD | dbSNP | MGI SNP Detail | Chr9:119956941 | f | Cx3cr1 : Locus-Region | 1 | SNP | C | T | C | T | T | C | C | T | C | C | C | C | C | C | T | C/T | |||
| rs33436300 MPD | dbSNP | MGI SNP Detail | Chr9:119956959 | f | Cx3cr1 : Locus-Region | 1 | SNP | G | A | G | G | G | A | G | G | G | G | G | G | A/G | ||||||
| rs33436302 MPD | dbSNP | MGI SNP Detail | Chr9:119956975 | f | Cx3cr1 : Locus-Region | 1 | SNP | A | G | A | G | G | G | A | G | A | A | A | A | A | A | G | A/G | |||
| rs33437164 MPD | dbSNP | MGI SNP Detail | Chr9:119957459 | f | Cx3cr1 : Locus-Region | 1 | SNP | G | A | G | A | G | A | A | G | A | G | G | A | A | A/G | |||||
| rs33437166 MPD | dbSNP | MGI SNP Detail | Chr9:119957480 | f | Cx3cr1 : Locus-Region | 1 | SNP | C | T | C | T | C | T | T | C | T | C | C | T | T | C/T | |||||
| rs33437168 MPD | dbSNP | MGI SNP Detail | Chr9:119957807 | f | Cx3cr1 : Locus-Region | 1 | SNP | G | A | G | A | A | G | G | G | G | G | G | G | G | A | A/G | ||||
| rs33437170 MPD | dbSNP | MGI SNP Detail | Chr9:119957870 | f | Cx3cr1 : mRNA-UTR | 1 | SNP | G | A | A | A | A | G | A | G | G | G | A | A/G | |||||||
| rs33437172 MPD | dbSNP | MGI SNP Detail | Chr9:119958868 | f | Cx3cr1 : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | G | T | G | T | G | G | G | G/T | |||||
| rs33437944 MPD | dbSNP | MGI SNP Detail | Chr9:119959048 | f | Cx3cr1 : mRNA-UTR | 1 | SNP | G | A | A | A | A | A | G | G | G | G | G | G | A | A/G | |||||
| rs33437946 MPD | dbSNP | MGI SNP Detail | Chr9:119959319 | f | Cx3cr1 : mRNA-UTR | 1 | SNP | T | C | C | C | T | C | T | C | T | T | C/T | ||||||||
| rs33437948 MPD | dbSNP | MGI SNP Detail | Chr9:119959331 | f | Cx3cr1 : mRNA-UTR | 1 | SNP | T | G | G | T | G | T | G | T | T | G/T | |||||||||
| rs33437950 MPD | dbSNP | MGI SNP Detail | Chr9:119959401 | f | Cx3cr1 : mRNA-UTR | 1 | SNP | T | C | T | C | T | T | T | T | C/T | ||||||||||
| rs33430475 MPD | dbSNP | MGI SNP Detail | Chr9:119959666 | f | Cx3cr1 : mRNA-UTR | 1 | SNP | C | A | A | A | A | C | C | A | C | C | C | C | C | C | A | A/C | |||
| rs33430477 MPD | dbSNP | MGI SNP Detail | Chr9:119959921 | f | Cx3cr1 : mRNA-UTR | 1 | SNP | A | G | G | A | A | A | A/G | ||||||||||||
| rs33430479 MPD | dbSNP | MGI SNP Detail | Chr9:119960010 | f | Cx3cr1 : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | G | G | A | G | A | G | G | A | G | A/G | |||
| rs33430481 MPD | dbSNP | MGI SNP Detail | Chr9:119960013 | f | Cx3cr1 : mRNA-UTR | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | C | A/C | |||||
| rs33430483 MPD | dbSNP | MGI SNP Detail | Chr9:119960066 | f | Cx3cr1 : mRNA-UTR | 1 | SNP | G | G | G | G | G | T | G | G | T | G | G | G | G | G/T | |||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs33431325 MPD | dbSNP | MGI SNP Detail | Chr9:119960164 | f | Cx3cr1 : mRNA-UTR | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||
| rs29745148 MPD | dbSNP | MGI SNP Detail | Chr9:119960982 | f | Cx3cr1 : Coding-Synonymous | 1 | SNP | C | C | C | T | C/T | ||||||||||||||
| rs29938306 MPD | dbSNP | MGI SNP Detail | Chr9:119961012 | f | Cx3cr1 : Coding-Synonymous | 2 | SNP | A | G | G | G | G | A | G | G | G | G | A | G | A | A | G | G | A/G | ||
| rs33431328 MPD | dbSNP | MGI SNP Detail | Chr9:119961063 | f | Cx3cr1 : Coding-Synonymous | 1 | SNP | A | A | A | A | A | G | A | A | G | A | G | A | A | G | A | A/G | |||
| rs33431330 MPD | dbSNP | MGI SNP Detail | Chr9:119961345 | f | Cx3cr1 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | G | A | G | A | G | G | G | A/G | ||||
| rs33431332 MPD | dbSNP | MGI SNP Detail | Chr9:119961405 | f | Cx3cr1 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | G | A | G | A | G | G | G | A/G | ||||
| rs29596566 MPD | dbSNP | MGI SNP Detail | Chr9:119961530 | f | Cx3cr1 : Intron | 1 | SNP | T | T | C | C/T | |||||||||||||||
| rs33432204 MPD | dbSNP | MGI SNP Detail | Chr9:119962653 | f | Cx3cr1 : Intron | 1 | SNP | A | A | A | A | A | G | A | G | A | A | A | A | A/G | ||||||
| rs33432206 MPD | dbSNP | MGI SNP Detail | Chr9:119962717 | f | Cx3cr1 : Intron | 1 | SNP | C | C | C | C | A | C | C | A | C | A | C | C | C | A/C | |||||
| rs33432208 MPD | dbSNP | MGI SNP Detail | Chr9:119962810 | f | Cx3cr1 : Intron | 1 | SNP | C | C | C | T | C | C | T | C | C/T | ||||||||||
| rs33432210 MPD | dbSNP | MGI SNP Detail | Chr9:119964006 | f | Cx3cr1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C/T | |||||
| rs33432212 MPD | dbSNP | MGI SNP Detail | Chr9:119964075 | f | Cx3cr1 : Intron | 1 | SNP | C | T | T | C | C | T | C/T | ||||||||||||
| rs30182951 MPD | dbSNP | MGI SNP Detail | Chr9:119964216 | f | Cx3cr1 : Intron | 1 | SNP | C | T | C/T | ||||||||||||||||
| rs30080918 MPD | dbSNP | MGI SNP Detail | Chr9:119964472 | f | Cx3cr1 : Intron | 2 | SNP | A | A | G | G | A | G | G | G | G | A/G | |||||||||
| rs29838878 MPD | dbSNP | MGI SNP Detail | Chr9:119964637 | f | Cx3cr1 : Intron | 1 | SNP | T | C | T | C | C/T | ||||||||||||||
| rs33433055 MPD | dbSNP | MGI SNP Detail | Chr9:119964793 | f | Cx3cr1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | |||
| rs33773380 MPD | dbSNP | MGI SNP Detail | Chr9:119964899 | f | Cx3cr1 : Intron | 1 | SNP | A | A | A | T | A/T | ||||||||||||||
| rs33433057 MPD | dbSNP | MGI SNP Detail | Chr9:119965041 | f | Cx3cr1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A/G | |||||
| rs33433059 MPD | dbSNP | MGI SNP Detail | Chr9:119965238 | f | Cx3cr1 : Intron | 1 | SNP | T | T | T | T | C | C | T | C | T | T | C/T | ||||||||
| rs33433061 MPD | dbSNP | MGI SNP Detail | Chr9:119965563 | f | Cx3cr1 : Intron | 1 | SNP | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | G/T | |||
| rs33433063 MPD | dbSNP | MGI SNP Detail | Chr9:119965962 | f | Cx3cr1 : Intron | 1 | SNP | A | G | G | A | A | G | A | A | A | A | A | A | A/G | ||||||
| rs33433815 MPD | dbSNP | MGI SNP Detail | Chr9:119966207 | f | Cx3cr1 : Intron | 1 | SNP | C | A | A | A | A | C | A | C | C | C | C | A/C | |||||||
| rs33433817 MPD | dbSNP | MGI SNP Detail | Chr9:119966208 | f | Cx3cr1 : Intron | 1 | SNP | G | G | T | G | G | G | G | G/T | |||||||||||
| rs33433819 MPD | dbSNP | MGI SNP Detail | Chr9:119966315 | f | Cx3cr1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | A | G | G | G | A/G | ||||
| rs33433821 MPD | dbSNP | MGI SNP Detail | Chr9:119966366 | f | Cx3cr1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | A/G | |||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs33433823 MPD | dbSNP | MGI SNP Detail | Chr9:119966478 | f | Cx3cr1 : Intron | 1 | SNP | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C/T | |||
| rs33434535 MPD | dbSNP | MGI SNP Detail | Chr9:119966508 | f | Cx3cr1 : Intron | 1 | SNP | G | G | G | G | G | C | C | G | C | G | C | G | G | C | G | C/G | |||
| rs33434537 MPD | dbSNP | MGI SNP Detail | Chr9:119966603 | f | Cx3cr1 : Intron | 1 | SNP | C | C | C | C | C | C | T | C | C | C/T | |||||||||
| rs33434539 MPD | dbSNP | MGI SNP Detail | Chr9:119966911 | f | Cx3cr1 : Intron | 1 | SNP | C | C | C | C | C | C | C | T | C | T | C | C | C | C/T | |||||
| rs33434541 MPD | dbSNP | MGI SNP Detail | Chr9:119966985 | f | Cx3cr1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | A/G | ||||
| rs30560841 MPD | dbSNP | MGI SNP Detail | Chr9:119967066 | f | Cx3cr1 : Intron | 1 | SNP | G | G | T | G/T | |||||||||||||||
| rs30823955 MPD | dbSNP | MGI SNP Detail | Chr9:119967071 | f | Cx3cr1 : Intron | 1 | SNP | T | T | C | C/T | |||||||||||||||
| rs30817512 MPD | dbSNP | MGI SNP Detail | Chr9:119967159 | f | Cx3cr1 : Intron | 1 | SNP | C | C | A | A/C | |||||||||||||||
| rs33434543 MPD | dbSNP | MGI SNP Detail | Chr9:119967181 | f | Cx3cr1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | A | G | G | A | G | A/G | |||
| rs30532566 MPD | dbSNP | MGI SNP Detail | Chr9:119967218 | f | Cx3cr1 : Intron | 1 | SNP | C | C | T | C/T | |||||||||||||||
| rs33435135 MPD | dbSNP | MGI SNP Detail | Chr9:119967562 | f | Cx3cr1 : Intron | 1 | SNP | T | T | T | T | C | T | T | T | T | T | T | T | C/T | ||||||
| rs33435137 MPD | dbSNP | MGI SNP Detail | Chr9:119967598 | f | Cx3cr1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | |||
| rs30774291 MPD | dbSNP | MGI SNP Detail | Chr9:119967640 | f | Cx3cr1 : Intron | 2 | SNP | G | G | G | G | G | G | G | A | G | A | G | A | G | G | G | A/G | |||
| rs33435140 MPD | dbSNP | MGI SNP Detail | Chr9:119968050 | f | Cx3cr1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | C | T | T | T | C/T | |||||
| rs33435142 MPD | dbSNP | MGI SNP Detail | Chr9:119968104 | f | Cx3cr1 : Intron | 1 | SNP | T | T | T | T | T | T | T | C | T | T | C | T | C/T | ||||||
| rs33435954 MPD | dbSNP | MGI SNP Detail | Chr9:119968157 | f | Cx3cr1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | T | G | T | G | G | G/T | |||||
| rs33435956 MPD | dbSNP | MGI SNP Detail | Chr9:119968732 | f | Cx3cr1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | T | C | C | C | C/T | |||||
| rs29789356 MPD | dbSNP | MGI SNP Detail | Chr9:119968791 | f | Cx3cr1 : Intron | 1 | SNP | T | T | T | A | A/T | ||||||||||||||
| rs33435958 MPD | dbSNP | MGI SNP Detail | Chr9:119968792 | f | Cx3cr1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | |||
| rs33435960 MPD | dbSNP | MGI SNP Detail | Chr9:119968809 | f | Cx3cr1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | T | A | T | A | A | T | A | A/T | |||
| rs29986663 MPD | dbSNP | MGI SNP Detail | Chr9:119968820 | f | Cx3cr1 : Intron | 2 | SNP | T | T | T | A | T | T | T | T | A | T | T | T | T | T | A | A/T | |||
| rs33435963 MPD | dbSNP | MGI SNP Detail | Chr9:119969062 | f | Cx3cr1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | C | T | C | T | T | C | T | C/T | |||
| rs30222369 MPD | dbSNP | MGI SNP Detail | Chr9:119969090 | f | Cx3cr1 : Intron | 1 | SNP | T | G | T | G/T | |||||||||||||||
| rs29731317 MPD | dbSNP | MGI SNP Detail | Chr9:119969199 | f | Cx3cr1 : Intron | 1 | SNP | A | G | A/G | ||||||||||||||||
| rs30074468 MPD | dbSNP | MGI SNP Detail | Chr9:119969202 | f | Cx3cr1 : Intron | 1 | SNP | C | T | C/T | ||||||||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs33774980 MPD | dbSNP | MGI SNP Detail | Chr9:119970037 | f | Cx3cr1 : Intron | 1 | SNP | T | G | G | G/T | |||||||||||||||
| rs30376641 MPD | dbSNP | MGI SNP Detail | Chr9:119970584 | f | Cx3cr1 : Intron | 1 | SNP | A | A | T | A/T | |||||||||||||||
| rs33436755 MPD | dbSNP | MGI SNP Detail | Chr9:119972522 | f | Cx3cr1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | G/T | |||
| rs33436757 MPD | dbSNP | MGI SNP Detail | Chr9:119972998 | f | Cx3cr1 : Intron | 2 | SNP | A | A | G | A | G | G | G | A | G | A | G | A | A | G | A/G | ||||
| rs33436759 MPD | dbSNP | MGI SNP Detail | Chr9:119973626 | f | Cx3cr1 : Intron | 1 | SNP | A | G | G | G | G | G | A | G | A | A | G | A/G | |||||||
| rs33436761 MPD | dbSNP | MGI SNP Detail | Chr9:119974319 | f | Cx3cr1 : Intron | 1 | SNP | T | T | T | T | T | T | T | C | T | T | C/T | ||||||||
| rs29938345 MPD | dbSNP | MGI SNP Detail | Chr9:119974522 | f | Cx3cr1 : Intron | 2 | SNP | G | A | G | A | A | G | G | G | A | G | G | G | G | G | G | A | A/G | ||
| rs33437634 MPD | dbSNP | MGI SNP Detail | Chr9:119974648 | f | Cx3cr1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | A/G | |||
| rs29740954 MPD | dbSNP | MGI SNP Detail | Chr9:119974800 | f | Cx3cr1 : Intron | 1 | SNP | G | G | G | G | A | A/G | |||||||||||||
| rs30095705 MPD | dbSNP | MGI SNP Detail | Chr9:119974993 | f | Cx3cr1 : Intron | 2 | SNP | G | G | G | A | G | G | G | A | G | G | G | G | G | G | G | G | A/G | ||
| rs33437637 MPD | dbSNP | MGI SNP Detail | Chr9:119975127 | f | Cx3cr1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | A | C | A | C | C | A | C | A/C | |||
| rs30337014 MPD | dbSNP | MGI SNP Detail | Chr9:119975283 | f | Cx3cr1 : Intron | 2 | SNP | A | A | G | G | G | G | G | A | G | A | A | G | A/G | ||||||
| rs33434056 MPD | dbSNP | MGI SNP Detail | Chr9:119976023 | f | Cx3cr1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A/G | ||||
| rs33766093 MPD | dbSNP | MGI SNP Detail | Chr9:119976487 | f | Cx3cr1 : Intron | 1 | SNP | A | C | A/C | ||||||||||||||||
| rs30481927 MPD | dbSNP | MGI SNP Detail | Chr9:119976538 | f | Cx3cr1 : Intron | 1 | SNP | A | G | A/G | ||||||||||||||||
| rs30265210 MPD | dbSNP | MGI SNP Detail | Chr9:119976615 | f | Cx3cr1 : Intron | 1 | SNP | C | T | C/T | ||||||||||||||||
| rs29639185 MPD | dbSNP | MGI SNP Detail | Chr9:119976670 | f | Cx3cr1 : Intron | 1 | SNP | C | C | T | C/T | |||||||||||||||
| rs6398248 MPD | dbSNP | MGI SNP Detail | Chr9:119976739 | f | Cx3cr1 : Intron | 1 | SNP | C | G | C/G | ||||||||||||||||
| rs33434058 MPD | dbSNP | MGI SNP Detail | Chr9:119977189 | f | Cx3cr1 : Intron | 2 | SNP | T | T | T | C | T | T | T | T | C | T | T | T | T | T | T | T | T | C/T | |
| rs30327272 MPD | dbSNP | MGI SNP Detail | Chr9:119977517 | f | Cx3cr1 : Locus-Region | 2 | SNP | C | C | T | C | T | T | C | C | T | C | C | C | C | C | C | C | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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