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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Phox2b
paired-like homeobox 2b
MGI:1100882

28 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs49580581
MPD | dbSNP | MGI SNP Detail
Chr5:67092504fPhox2b : 1901 bp downstream of
rs : within coordinates of
rslk : within coordinates of
2SNP GA      A   G  A   A/G
rs47468408
MPD | dbSNP | MGI SNP Detail
Chr5:67092530fPhox2b : 1875 bp downstream of
rs : within coordinates of
rslk : within coordinates of
2SNP  T      T   C  T   C/T
rs51169233
MPD | dbSNP | MGI SNP Detail
Chr5:67092532fPhox2b : 1873 bp downstream of
rs : within coordinates of
rslk : within coordinates of
2SNP  C      C   T  C   C/T
rs52248916
MPD | dbSNP | MGI SNP Detail
Chr5:67092648fPhox2b : 1757 bp downstream of
rs : within coordinates of
rslk : within coordinates of
1SNP A                  A
rs48227409
MPD | dbSNP | MGI SNP Detail
Chr5:67092726fPhox2b : 1679 bp downstream of
rs : within coordinates of
rslk : within coordinates of
2SNP GC      C   G  C   C/G
rs46556150
MPD | dbSNP | MGI SNP Detail
Chr5:67092785fPhox2b : 1620 bp downstream of
rs : within coordinates of
rslk : within coordinates of
2SNP CT          C  T   C/T
rs47606746
MPD | dbSNP | MGI SNP Detail
Chr5:67092850fPhox2b : 1555 bp downstream of
rs : within coordinates of
rslk : within coordinates of
2SNP TC      C   T  C   C/T
rs50159123
MPD | dbSNP | MGI SNP Detail
Chr5:67092854fPhox2b : 1551 bp downstream of
rs : within coordinates of
rslk : within coordinates of
2SNP T       C   T  C   C/T
rs223109501
MPD | dbSNP | MGI SNP Detail
Chr5:67092866fPhox2b : 1539 bp downstream of
rs : within coordinates of
rslk : within coordinates of
1SNP             C  G   C/G
rs51589489
MPD | dbSNP | MGI SNP Detail
Chr5:67093294fPhox2b : 1111 bp downstream of
rs : within coordinates of
rslk : within coordinates of
2SNP CA      A   C  A   A/C
rs6177230
MPD | dbSNP | MGI SNP Detail
Chr5:67093719fPhox2b : 686 bp downstream of
rs : within coordinates of
rslk : within coordinates of
1SNP      T A           A/T
rs6177231
MPD | dbSNP | MGI SNP Detail
Chr5:67093720fPhox2b : 685 bp downstream of
rs : within coordinates of
rslk : within coordinates of
1SNP      G C           C/G
rs29680005
MPD | dbSNP | MGI SNP Detail
Chr5:67094774fPhox2b : mRNA-UTR
rs : within coordinates of
rslk : within coordinates of
3SNP G    G  T   G  T   G/T
rs33047041
MPD | dbSNP | MGI SNP Detail
Chr5:67095179fPhox2b : mRNA-UTR
rs : within coordinates of
rslk : within coordinates of
3SNP  G   A  G   A  G   A/G
rs33508704
MPD | dbSNP | MGI SNP Detail
Chr5:67095238fPhox2b : mRNA-UTR
rs : within coordinates of
rslk : within coordinates of
3SNP  T   C  T   C  T   C/T
rs33127059
MPD | dbSNP | MGI SNP Detail
Chr5:67095284fPhox2b : mRNA-UTR
rs : within coordinates of
rslk : within coordinates of
3SNP  G   A  G   A  G   A/G
rs33569704
MPD | dbSNP | MGI SNP Detail
Chr5:67095618fPhox2b : mRNA-UTR
rs : within coordinates of
rslk : within coordinates of
3SNPA C   A  C   A  C   A/C
rs31468197
MPD | dbSNP | MGI SNP Detail
Chr5:67096885fPhox2b : Intron
rs : within coordinates of
rslk : within coordinates of
1SNPG GGGG G GGG  GG GCGC/G
rs33399678
MPD | dbSNP | MGI SNP Detail
Chr5:67097034fPhox2b : Intron
rs : within coordinates of
rslk : within coordinates of
1SNPT C                 C/T
rs29776386
MPD | dbSNP | MGI SNP Detail
Chr5:67097463fPhox2b : Intron
rs : within coordinates of
rslk : within coordinates of
4SNPT GGGGTT GTG TGGGGTGG/T
rs31468198
MPD | dbSNP | MGI SNP Detail
Chr5:67099073fGm33167 : within coordinates of
Phox2b : mRNA-UTR
rs : within coordinates of
rslk : within coordinates of
1SNPG GGGG G GGGG GG GCGC/G
rs33381190
MPD | dbSNP | MGI SNP Detail
Chr5:67099598fGm33167 : within coordinates of
Phox2b : Locus-Region
rs : within coordinates of
rslk : within coordinates of
2SNP AA   T  A          A/T
rs31468199
MPD | dbSNP | MGI SNP Detail
Chr5:67099703fGm33167 : within coordinates of
Phox2b : Locus-Region
rs : within coordinates of
rslk : within coordinates of
4SNPAAGGGGAG GA GAGGGGGGA/G
rs31468200
MPD | dbSNP | MGI SNP Detail
Chr5:67099963fGm33167 : within coordinates of
Phox2b : Locus-Region
rs : within coordinates of
rslk : within coordinates of
4SNPTTCCC TC CT  TCCC CCC/T
rs31468201
MPD | dbSNP | MGI SNP Detail
Chr5:67100235fGm33167 : within coordinates of
Phox2b : Locus-Region
rs : within coordinates of
rslk : within coordinates of
4SNPG AAAAGG AGAAGAAAAGAA/G
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs29584918
MPD | dbSNP | MGI SNP Detail
Chr5:67100589fGm33167 : within coordinates of
Phox2b : Locus-Region
rs : within coordinates of
rslk : within coordinates of
3SNPTTC   T  C   T  C   C/T
rs31468202
MPD | dbSNP | MGI SNP Detail
Chr5:67100861fGm33167 : within coordinates of
Phox2b : Locus-Region
rs : within coordinates of
rslk : within coordinates of
1SNPG GGGG A GG G GG GAGA/G
rs31468203
MPD | dbSNP | MGI SNP Detail
Chr5:67100922fGm33167 : within coordinates of
Phox2b : Locus-Region
rs : within coordinates of
rslk : within coordinates of
4SNPTTCCCCTC CT CTCCCCCCC/T

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory