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Mouse SNPs
Query Results -- Summary
Genome Coordinate Discrepancy
The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details).
 Symbol
Name
ID
Phox2b
paired-like homeobox 2b
MGI:1100882

12 matching SNPs displayed


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 128)
Map Position
(NCBI Build 37)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs6177230
MPD | dbSNP | MGI SNP Detail
Chr5:67484958fPhox2b : Locus-Region1SNP      T A         A/T
rs6177231
MPD | dbSNP | MGI SNP Detail
Chr5:67484959fPhox2b : Locus-Region1SNP      G C         C/G
rs29680005
MPD | dbSNP | MGI SNP Detail
Chr5:67486013fPhox2b : mRNA-UTR1SNP G    G  T        G/T
rs33047041
MPD | dbSNP | MGI SNP Detail
Chr5:67486418fPhox2b : mRNA-UTR1SNP  G   A  G        A/G
rs33508704
MPD | dbSNP | MGI SNP Detail
Chr5:67486477fPhox2b : mRNA-UTR1SNP  T   C  T        C/T
rs33127059
MPD | dbSNP | MGI SNP Detail
Chr5:67486523fPhox2b : mRNA-UTR1SNP  G   A  G        A/G
rs33569704
MPD | dbSNP | MGI SNP Detail
Chr5:67486840fPhox2b : mRNA-UTR1SNPA C   A  C        A/C
rs31468197
MPD | dbSNP | MGI SNP Detail
Chr5:67488124fPhox2b : Intron1SNPG GGGG G GGG GGGCGC/G
rs33399678
MPD | dbSNP | MGI SNP Detail
Chr5:67488165fPhox2b : Intron1SNPT C               C/T
rs29776386
MPD | dbSNP | MGI SNP Detail
Chr5:67488702fPhox2b : Intron2SNPT GGGGTT GTG GGGTGG/T
rs31468198
MPD | dbSNP | MGI SNP Detail
Chr5:67490312fPhox2b : mRNA-UTR1SNPG GGGG G GGGGGGGCGC/G
rs33381190
MPD | dbSNP | MGI SNP Detail
Chr5:67490837fPhox2b : Locus-Region1SNP AA   T  A        A/T

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
06/05/2013
MGI 5.13
The Jackson Laboratory