|
Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
|
Symbol Name ID |
Pitx2 paired-like homeodomain transcription factor 2 MGI:109340 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs36551210 MPD | dbSNP | MGI SNP Detail | Chr3:128903642 | f | Pitx2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G |
| rs36477677 MPD | dbSNP | MGI SNP Detail | Chr3:128904650 | f | Pitx2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G |
| rs37142490 MPD | dbSNP | MGI SNP Detail | Chr3:128905023 | f | Pitx2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G |
| rs37304890 MPD | dbSNP | MGI SNP Detail | Chr3:128905861 | f | Pitx2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G/T |
| rs38660932 MPD | dbSNP | MGI SNP Detail | Chr3:128906268 | f | Pitx2 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G |
| rs37129609 MPD | dbSNP | MGI SNP Detail | Chr3:128906668 | f | Pitx2 : Intron | 1 | SNP | C | C | C | C | C | G | C | C | C | C | C | C | G | C | C/G | |
| rs37626992 MPD | dbSNP | MGI SNP Detail | Chr3:128906689 | f | Pitx2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | A | G | A/G |
| rs36486498 MPD | dbSNP | MGI SNP Detail | Chr3:128906737 | f | Pitx2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | T | C | T | C | C/T |
| rs38432017 MPD | dbSNP | MGI SNP Detail | Chr3:128907380 | f | Pitx2 : Coding-NonSynonymous Pitx2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A/C |
| rs39016764 MPD | dbSNP | MGI SNP Detail | Chr3:128907771 | f | Pitx2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | C/T |
| rs36928185 MPD | dbSNP | MGI SNP Detail | Chr3:128907897 | f | Pitx2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | A | G | A/G |
| rs38228906 MPD | dbSNP | MGI SNP Detail | Chr3:128908082 | f | Pitx2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A/G |
| rs37111181 MPD | dbSNP | MGI SNP Detail | Chr3:128908285 | f | Pitx2 : Intron | 1 | SNP | G | G | G | G | G | C | G | G | G | G | G | G | G | C | G | C/G |
| rs38621055 MPD | dbSNP | MGI SNP Detail | Chr3:128908490 | f | Pitx2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G |
| rs36606456 MPD | dbSNP | MGI SNP Detail | Chr3:128908509 | f | Pitx2 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | T | T | T | A | T | T | A/T | |
| rs38337519 MPD | dbSNP | MGI SNP Detail | Chr3:128908840 | f | Pitx2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G |
| rs36546358 MPD | dbSNP | MGI SNP Detail | Chr3:128909146 | f | Pitx2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C/T | |
| rs37027127 MPD | dbSNP | MGI SNP Detail | Chr3:128909149 | f | Pitx2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | C | C/T | |
| rs38624362 MPD | dbSNP | MGI SNP Detail | Chr3:128909542 | f | Pitx2 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | T | T | T | T | T | T | T | A/T |
| rs36668337 MPD | dbSNP | MGI SNP Detail | Chr3:128909590 | f | Pitx2 : Intron | 1 | SNP | T | T | T | T | T | G | T | T | T | T | T | T | T | G | T | G/T |
| rs38627191 MPD | dbSNP | MGI SNP Detail | Chr3:128909690 | f | Pitx2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T |
| rs37495240 MPD | dbSNP | MGI SNP Detail | Chr3:128909842 | f | Pitx2 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | C | C | A/C | |
| rs36259914 MPD | dbSNP | MGI SNP Detail | Chr3:128909998 | f | Pitx2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |
| rs37633342 MPD | dbSNP | MGI SNP Detail | Chr3:128910563 | f | Pitx2 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | T | T | T | T | T | A | T | A/T |
| rs37438895 MPD | dbSNP | MGI SNP Detail | Chr3:128910835 | f | Pitx2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs37413629 MPD | dbSNP | MGI SNP Detail | Chr3:128912306 | f | Pitx2 : Intron | 1 | SNP | A | A | A | A | A | T | A | A | A | A | A | A | A | T | A | A/T |
| rs37259260 MPD | dbSNP | MGI SNP Detail | Chr3:128912583 | f | Pitx2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | A | G | G | A/G | |
| rs38639497 MPD | dbSNP | MGI SNP Detail | Chr3:128912846 | f | Pitx2 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | G | A | G | A | A/G |
| rs38140218 MPD | dbSNP | MGI SNP Detail | Chr3:128913117 | f | Pitx2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | T | C | C/T |
| rs38720505 MPD | dbSNP | MGI SNP Detail | Chr3:128913566 | f | Pitx2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G |
| rs36804143 MPD | dbSNP | MGI SNP Detail | Chr3:128913974 | f | Pitx2 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | A/C |
| rs36344978 MPD | dbSNP | MGI SNP Detail | Chr3:128914011 | f | Pitx2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | A/G |
| rs37751896 MPD | dbSNP | MGI SNP Detail | Chr3:128914262 | f | Pitx2 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | G | A | A/G |
| rs36992098 MPD | dbSNP | MGI SNP Detail | Chr3:128914419 | f | Pitx2 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G/T |
| rs38406950 MPD | dbSNP | MGI SNP Detail | Chr3:128914765 | f | Pitx2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | C | T | C | T | C/T |
| rs36791285 MPD | dbSNP | MGI SNP Detail | Chr3:128915004 | f | Pitx2 : Locus-Region Pitx2 : Intron | 1 | SNP | T | T | T | T | T | G | T | T | T | T | T | T | T | G | T | G/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
||
|
Citing These Resources Funding Information Warranty Disclaimer & Copyright Notice Send questions and comments to User Support. |
last database update 05/08/2013 MGI 5.13 |
|
|
|
||
Analysis Tools