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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Pitx2
paired-like homeodomain transcription factor 2
MGI:109340

43 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs48937366
MPD | dbSNP | MGI SNP Detail
Chr3:129198417f 2SNPT              TC C/T
rs36551210
MPD | dbSNP | MGI SNP Detail
Chr3:129200724f 1SNPGGGGGGGGAGGGGGG   A/G
rs36477677
MPD | dbSNP | MGI SNP Detail
Chr3:129201732f 1SNPGAGGGGGGGGGGGGG   A/G
rs37142490
MPD | dbSNP | MGI SNP Detail
Chr3:129202105f 1SNPGAGGGGGGGGGGGGG   A/G
rs37304890
MPD | dbSNP | MGI SNP Detail
Chr3:129202943f 1SNPGGGGGGGGTGGGGGG   G/T
rs38660932
MPD | dbSNP | MGI SNP Detail
Chr3:129203350f 1SNPAGAAAAAAAAAAAAA   A/G
rs37129609
MPD | dbSNP | MGI SNP Detail
Chr3:129203750f 1SNPCGCCCCCCGCCC CC   C/G
rs37626992
MPD | dbSNP | MGI SNP Detail
Chr3:129203771f 1SNPGAGGGGGGAGGGGGG   A/G
rs36486498
MPD | dbSNP | MGI SNP Detail
Chr3:129203819f 1SNPCTCCCCCCTCCCTCC   C/T
rs38432017
MPD | dbSNP | MGI SNP Detail
Chr3:129204462f 1SNPAAAAAAAAAAAACAA   A/C
rs39016764
MPD | dbSNP | MGI SNP Detail
Chr3:129204853f 1SNPTCTTTTTTCTTTTTT   C/T
rs36928185
MPD | dbSNP | MGI SNP Detail
Chr3:129204979f 1SNPGAGGGGGGAGGGGGG   A/G
rs38228906
MPD | dbSNP | MGI SNP Detail
Chr3:129205164f 1SNPAAAAAAAAAAAAGAA   A/G
rs37111181
MPD | dbSNP | MGI SNP Detail
Chr3:129205367f 1SNPGCGGGGGGCGGGGGG   C/G
rs38621055
MPD | dbSNP | MGI SNP Detail
Chr3:129205572f 1SNPGGGGGGGGAGGGGGG   A/G
rs36606456
MPD | dbSNP | MGI SNP Detail
Chr3:129205591f 1SNPTATTTTTT TTTATT   A/T
rs38337519
MPD | dbSNP | MGI SNP Detail
Chr3:129205922f 1SNPAAAAAAAAGAAAAAA   A/G
rs36546358
MPD | dbSNP | MGI SNP Detail
Chr3:129206228f 1SNPCTCCCCCCCCCCCC    C/T
rs37027127
MPD | dbSNP | MGI SNP Detail
Chr3:129206231f 1SNPT TTTTTTTTTTTTC   C/T
rs38624362
MPD | dbSNP | MGI SNP Detail
Chr3:129206624f 1SNPTATTTTTTTTTTTTT   A/T
rs36668337
MPD | dbSNP | MGI SNP Detail
Chr3:129206672f 1SNPTGTTTTTTGTTTTTT   G/T
rs38627191
MPD | dbSNP | MGI SNP Detail
Chr3:129206772f 1SNPCTCCCCCCCCCCCCC   C/T
rs37495240
MPD | dbSNP | MGI SNP Detail
Chr3:129206924f 1SNPCACCCCCC CCCCCC   A/C
rs36259914
MPD | dbSNP | MGI SNP Detail
Chr3:129207080f 1SNPCCCCCCC TCCCCCC   C/T
rs108821934
MPD | dbSNP | MGI SNP Detail
Chr3:129207358f 1SNP     G            G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs37633342
MPD | dbSNP | MGI SNP Detail
Chr3:129207645f 1SNPTATTTTTTATTTTTT   A/T
rs37438895
MPD | dbSNP | MGI SNP Detail
Chr3:129207917f 1SNPCTCCCCCCCCCCCCC   C/T
rs232136790
MPD | dbSNP | MGI SNP Detail
Chr3:129209189f 1SNP               CA A/C
rs37413629
MPD | dbSNP | MGI SNP Detail
Chr3:129209388f 1SNPATAAAAAATAAAAAA   A/T
rs37259260
MPD | dbSNP | MGI SNP Detail
Chr3:129209665f 1SNPGAGGGGGG GGGAGG   A/G
rs38639497
MPD | dbSNP | MGI SNP Detail
Chr3:129209928f 1SNPAGAAAAAAGAAAGAA   A/G
rs38140218
MPD | dbSNP | MGI SNP Detail
Chr3:129210199f 1SNPCTCCCCCCTCCCCCC   C/T
rs38720505
MPD | dbSNP | MGI SNP Detail
Chr3:129210648f 1SNPGGGGGGGGAGGGGGG   A/G
rs36804143
MPD | dbSNP | MGI SNP Detail
Chr3:129211056f 1SNPCACCCCCCCCCCCCC   A/C
rs36344978
MPD | dbSNP | MGI SNP Detail
Chr3:129211093f 1SNPGGGGGGGGGGGGAGG   A/G
rs37751896
MPD | dbSNP | MGI SNP Detail
Chr3:129211344f 1SNPAGAAAAAAGAAAAAA   A/G
rs36992098
MPD | dbSNP | MGI SNP Detail
Chr3:129211501f 1SNPGTGGGGGGGGGGGGG   G/T
rs38406950
MPD | dbSNP | MGI SNP Detail
Chr3:129211847f 1SNPTTTTTTTTCTTTCTT   C/T
rs36791285
MPD | dbSNP | MGI SNP Detail
Chr3:129212086f 1SNPTGTTTTTTGTTTTTT   G/T
rs108188744
MPD | dbSNP | MGI SNP Detail
Chr3:129213201f 1SNPA    A           TA/T
rs107908797
MPD | dbSNP | MGI SNP Detail
Chr3:129213236f 1SNPA    A           TA/T
rs256841628
MPD | dbSNP | MGI SNP Detail
Chr3:129215388f 1SNP               TC C/T
rs218790908
MPD | dbSNP | MGI SNP Detail
Chr3:129219285f 1SNP               TG G/T

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/26/2016
MGI 6.03
The Jackson Laboratory