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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Nkx2-1
NK2 homeobox 1
MGI:108067

22 matching SNPs displayed
Full result set is also available in a tab-delimited format.


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 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs46411043
MPD | dbSNP | MGI SNP Detail
Chr12:56530432fE030019B13Rik : Locus-Region
Eccp : within coordinates of
Nkx2-1 : 1526 bp downstream of
2SNP TT     T   C  T   C/T
rs51312192
MPD | dbSNP | MGI SNP Detail
Chr12:56530613fE030019B13Rik : Locus-Region
Eccp : within coordinates of
Nkx2-1 : 1345 bp downstream of
2SNP TT     T   C  T   C/T
rs52198426
MPD | dbSNP | MGI SNP Detail
Chr12:56530654fE030019B13Rik : Locus-Region
Eccp : within coordinates of
Nkx2-1 : 1304 bp downstream of
2SNP GG     G   C  G   C/G
rs48102019
MPD | dbSNP | MGI SNP Detail
Chr12:56530826fE030019B13Rik : Locus-Region
Eccp : within coordinates of
Nkx2-1 : 1132 bp downstream of
2SNP  C         T  C   C/T
rs29124422
MPD | dbSNP | MGI SNP Detail
Chr12:56531555fEccp : within coordinates of
Nkx2-1 : Locus-Region
3SNP  G   T     T  G   G/T
rs33847179
MPD | dbSNP | MGI SNP Detail
Chr12:56532582fEccp : within coordinates of
Nkx2-1 : mRNA-UTR
3SNP  T   C T   C  T   C/T
rs29222356
MPD | dbSNP | MGI SNP Detail
Chr12:56533031fEccp : within coordinates of
Nkx2-1 : mRNA-UTR
3SNP GG   C G   C  G   C/G
rs29148768
MPD | dbSNP | MGI SNP Detail
Chr12:56533740fEccp : within coordinates of
Nkx2-1 : Coding-Synonymous
2SNP  G   A G          A/G
rs48734007
MPD | dbSNP | MGI SNP Detail
Chr12:56534204fEccp : within coordinates of
Nkx2-1 : Intron
1SNP        A          A
rs47616023
MPD | dbSNP | MGI SNP Detail
Chr12:56534205fEccp : within coordinates of
Nkx2-1 : Intron
1SNP        G          G
rs29207324
MPD | dbSNP | MGI SNP Detail
Chr12:56534635fEccp : within coordinates of
Nkx2-1 : Intron
1SNP  G   A            A/G
rs52347805
MPD | dbSNP | MGI SNP Detail
Chr12:56535436fEccp : within coordinates of
Gm26973 : within coordinates of
Nkx2-1 : Intron
Nkx2-1 : Locus-Region
1SNP  A                A
rs52163746
MPD | dbSNP | MGI SNP Detail
Chr12:56535440fEccp : within coordinates of
Gm26973 : within coordinates of
Nkx2-1 : Intron
Nkx2-1 : Locus-Region
1SNP GA                A/G
rs52200890
MPD | dbSNP | MGI SNP Detail
Chr12:56535449fEccp : within coordinates of
Gm26973 : within coordinates of
Nkx2-1 : Intron
Nkx2-1 : Locus-Region
1SNP  G                G
rs29134780
MPD | dbSNP | MGI SNP Detail
Chr12:56537361fEccp : within coordinates of
Gm26973 : within coordinates of
Nkx2-1 : Locus-Region
4SNP TTTTTATTTTTAT TTTAA/T
rs29223013
MPD | dbSNP | MGI SNP Detail
Chr12:56537422fEccp : within coordinates of
Gm26973 : within coordinates of
Nkx2-1 : Locus-Region
4SNPCCCC CT C  CT  CC TC/T
rs48824584
MPD | dbSNP | MGI SNP Detail
Chr12:56537521fEccp : within coordinates of
Gm26973 : within coordinates of
Nkx2-1 : Locus-Region
1SNP  GGGG GGGGG G  GGTG/T
rs50017412
MPD | dbSNP | MGI SNP Detail
Chr12:56537745fEccp : within coordinates of
Gm26973 : within coordinates of
Nkx2-1 : Locus-Region
1SNPG GGGG AGGGG GG GGGA/G
rs29156225
MPD | dbSNP | MGI SNP Detail
Chr12:56537913fEccp : within coordinates of
Gm26973 : within coordinates of
Nkx2-1 : Locus-Region
3SNP CC   T C   T  C   C/T
rs48537441
MPD | dbSNP | MGI SNP Detail
Chr12:56538062fEccp : within coordinates of
Gm26973 : within coordinates of
Nkx2-1 : Locus-Region
1SNPA AAAA AAACA A  ACAA/C
rs48864074
MPD | dbSNP | MGI SNP Detail
Chr12:56538457fEccp : within coordinates of
Gm26973 : within coordinates of
Nkx2-1 : Locus-Region
1SNPA AAAA GAAGA A  A AA/G
rs29138149
MPD | dbSNP | MGI SNP Detail
Chr12:56538733fEccp : within coordinates of
Gm26973 : within coordinates of
Nkx2-1 : Locus-Region
4SNPTTTTTT GTTGTGT TTGGG/T

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory