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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Cln3
ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
MGI:107537

113 matching SNPs displayed
Full result set is also available in a tab-delimited format.
Include SNPs that map to multiple locations

Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs45954479
MPD | dbSNP | MGI SNP Detail
Chr7:126569956f 1SNPT     C                     C/T
rs30630717
MPD | dbSNP | MGI SNP Detail
Chr7:126569976r 2SNPG G   T                     G/T
rs31012809
MPD | dbSNP | MGI SNP Detail
Chr7:126570118r 2SNPG G   T                     G/T
rs30979145
MPD | dbSNP | MGI SNP Detail
Chr7:126570194r 2SNPT T   C         T           C/T
rs30779595
MPD | dbSNP | MGI SNP Detail
Chr7:126570973r 2SNP      A         G           A/G
rs30611432
MPD | dbSNP | MGI SNP Detail
Chr7:126570995r 2SNP      T         A           A/T
rs46272215
MPD | dbSNP | MGI SNP Detail
Chr7:126571217f 1SNP      T                     T
rs6337342
MPD | dbSNP | MGI SNP Detail
Chr7:126571398f 1SNP  G                       T G/T
rs6337360
MPD | dbSNP | MGI SNP Detail
Chr7:126571399f 1SNP  T                       C C/T
rs6339092
MPD | dbSNP | MGI SNP Detail
Chr7:126571729f 1SNP  C                       T C/T
rs30959042
MPD | dbSNP | MGI SNP Detail
Chr7:126571821r 2SNPC C   T         C           C/T
rs33088888
MPD | dbSNP | MGI SNP Detail
Chr7:126572114f 1SNPGA GGGGGGGGGGGGG            A/G
rs3091031
MPD | dbSNP | MGI SNP Detail
Chr7:126572194r 3SNPT T   C         T  TCTTTTT  C/T
rs33088891
MPD | dbSNP | MGI SNP Detail
Chr7:126572221f 1SNPGA GGGGGGGGGGGGG            A/G
rs33089274
MPD | dbSNP | MGI SNP Detail
Chr7:126572253f 1SNPTC TTTTT TTTTTTT            C/T
rs30920817
MPD | dbSNP | MGI SNP Detail
Chr7:126572264r 3SNPGGGGGGAGGGGGGGGG            A/G
rs33864411
MPD | dbSNP | MGI SNP Detail
Chr7:126572320r 2SNPC C   T                     C/T
rs33089278
MPD | dbSNP | MGI SNP Detail
Chr7:126572571f 1SNPTC TTTTTCTTTTTTT            C/T
rs108537299
MPD | dbSNP | MGI SNP Detail
Chr7:126572725f 1SNP      A                     A
rs33089281
MPD | dbSNP | MGI SNP Detail
Chr7:126572808f 1SNPGC GGGGGCGGGGGGG            C/G
rs51445731
MPD | dbSNP | MGI SNP Detail
Chr7:126572880f 1SNP      A         G           A/G
rs33090174
MPD | dbSNP | MGI SNP Detail
Chr7:126572971f 1SNPCT CCCCCTCCCCCCC            C/T
rs33090177
MPD | dbSNP | MGI SNP Detail
Chr7:126573076f 2SNPCC CCCTCCCCCCCCCC           C/T
rs33090179
MPD | dbSNP | MGI SNP Detail
Chr7:126573111f 1SNPGT GGGGGGGGGGGGG            G/T
rs33090182
MPD | dbSNP | MGI SNP Detail
Chr7:126573213f 1SNPTC TTTTT TTTTTTT            C/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs33091035
MPD | dbSNP | MGI SNP Detail
Chr7:126573218f 1SNPGG GGGGGAGGGGGGG            A/G
rs33091038
MPD | dbSNP | MGI SNP Detail
Chr7:126573249f 1SNPTC TTTTTCTTTTTTT            C/T
rs31300735
MPD | dbSNP | MGI SNP Detail
Chr7:126573344f 1SNP  G   A         G           A/G
rs33091041
MPD | dbSNP | MGI SNP Detail
Chr7:126573573f 1SNPGA GGGGGGGGGGGGG            A/G
rs33091754
MPD | dbSNP | MGI SNP Detail
Chr7:126574338f 1SNPTC TTTTT TTTTTTT            C/T
rs32314550
MPD | dbSNP | MGI SNP Detail
Chr7:126574471f 1SNP  T   C         T           C/T
rs31921522
MPD | dbSNP | MGI SNP Detail
Chr7:126574654f 2SNPT T   C         T           C/T
rs32439369
MPD | dbSNP | MGI SNP Detail
Chr7:126574664f 2SNPAGAAAAGAGAAAAAAAA           A/G
rs31769684
MPD | dbSNP | MGI SNP Detail
Chr7:126574781f 1SNPA A   T         A           A/T
rs33091759
MPD | dbSNP | MGI SNP Detail
Chr7:126574894f 1SNPAA AAAAAGGAAAAAA            A/G
rs33091762
MPD | dbSNP | MGI SNP Detail
Chr7:126575054f 1SNPGG GGGGGAGGGGGGG            A/G
rs31179937
MPD | dbSNP | MGI SNP Detail
Chr7:126575311f 2SNPC C   T         C           C/T
rs31938580
MPD | dbSNP | MGI SNP Detail
Chr7:126575403f 2SNPA A   G         A           A/G
rs33092635
MPD | dbSNP | MGI SNP Detail
Chr7:126575464f 1SNPGA GGGGGGGGGGGGG            A/G
rs32244832
MPD | dbSNP | MGI SNP Detail
Chr7:126575576f 2SNPC C   T         C           C/T
rs31132389
MPD | dbSNP | MGI SNP Detail
Chr7:126575942f 1SNPA A   G   A     A           A/G
rs31992766
MPD | dbSNP | MGI SNP Detail
Chr7:126576555f 2SNPC C   T   C     C           C/T
rs33088276
MPD | dbSNP | MGI SNP Detail
Chr7:126577691f 1SNPAA AAAAAGGAAAAAA            A/G
rs33088279
MPD | dbSNP | MGI SNP Detail
Chr7:126578034f 1SNPT  TTTTT CTTTTTT            C/T
rs33088282
MPD | dbSNP | MGI SNP Detail
Chr7:126578134f 1SNPCA CCCCCAACCCCCC            A/C
rs33088965
MPD | dbSNP | MGI SNP Detail
Chr7:126578173f 1SNPCT CCCCCTTCCCCCC            C/T
rs33088967
MPD | dbSNP | MGI SNP Detail
Chr7:126579331f 1SNPAG AAA AGGAAAAAA            A/G
rs33088969
MPD | dbSNP | MGI SNP Detail
Chr7:126579627f 1SNPCT CCCCC  CCCCCC            C/T
rs217657032
MPD | dbSNP | MGI SNP Detail
Chr7:126579785f 1SNP                 AT         A/T
rs33088971
MPD | dbSNP | MGI SNP Detail
Chr7:126579788f 1SNPGA GGGAGAA GG GG            A/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs33088973
MPD | dbSNP | MGI SNP Detail
Chr7:126580116f 1SNPCT CCC CCCCCCCCC            C/T
rs33089965
MPD | dbSNP | MGI SNP Detail
Chr7:126580125f 1SNPCC CCC CACCCCCCC            A/C
rs33089967
MPD | dbSNP | MGI SNP Detail
Chr7:126580349f 2SNPGG AAGGAGGGGGGGG GA         A/G
rs46264753
MPD | dbSNP | MGI SNP Detail
Chr7:126580731f 1SNP      G         T           G/T
rs255147107
MPD | dbSNP | MGI SNP Detail
Chr7:126580862f 1SNP                 TC         C/T
rs33089969
MPD | dbSNP | MGI SNP Detail
Chr7:126580923f 1SNPTT TTTTTCCTTTTTT            C/T
rs32114865
MPD | dbSNP | MGI SNP Detail
Chr7:126580939f 3SNPCCCCCCTCCCCCCCCC            C/T
rs31771624
MPD | dbSNP | MGI SNP Detail
Chr7:126581088f 2SNPC C   T   C                 C/T
rs32210652
MPD | dbSNP | MGI SNP Detail
Chr7:126581134f 3SNPTCTTTTCTCCTTTTTT            C/T
rs33090956
MPD | dbSNP | MGI SNP Detail
Chr7:126581368f 1SNPAA AAAAAGGAAAAAA            A/G
rs33090958
MPD | dbSNP | MGI SNP Detail
Chr7:126581434f 1SNPCC CCCCCTTCCCCCC            C/T
rs33090961
MPD | dbSNP | MGI SNP Detail
Chr7:126581473f 1SNPGG GGGGGAAGGGGGG            A/G
rs33091794
MPD | dbSNP | MGI SNP Detail
Chr7:126581780f 1SNPAA AAAAAG AAAAAA            A/G
rs33091797
MPD | dbSNP | MGI SNP Detail
Chr7:126581922f 1SNPCC CCCCCTTCCCCCC            C/T
rs33091800
MPD | dbSNP | MGI SNP Detail
Chr7:126581942f 1SNPGG GGGGGTTGGGGGG            G/T
rs33091802
MPD | dbSNP | MGI SNP Detail
Chr7:126582025f 1SNPCC CCCCC TCCCCCC            C/T
rs33092615
MPD | dbSNP | MGI SNP Detail
Chr7:126582062f 1SNPCC CCCCCTTCCCCCC            C/T
rs33092618
MPD | dbSNP | MGI SNP Detail
Chr7:126582201f 1SNPTT TTTTTG TTTTTT            G/T
rs33092621
MPD | dbSNP | MGI SNP Detail
Chr7:126582223f 1SNPCC CCCCCT CCCCCC            C/T
rs33093314
MPD | dbSNP | MGI SNP Detail
Chr7:126582291f 1SNPAA AAAAAG AAAAAA            A/G
rs52197320
MPD | dbSNP | MGI SNP Detail
Chr7:126582389f 1SNPA     C         A           A/C
rs33093317
MPD | dbSNP | MGI SNP Detail
Chr7:126582390f 1SNP C CCC CAACCCCCC            A/C
rs31101004
MPD | dbSNP | MGI SNP Detail
Chr7:126582403f 2SNPA A   G   A     A           A/G
rs33093320
MPD | dbSNP | MGI SNP Detail
Chr7:126582534f 1SNPCC CCCCCTTCCCCCC            C/T
rs31961492
MPD | dbSNP | MGI SNP Detail
Chr7:126582711f 2SNPT     C   T     T           C/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs33093322
MPD | dbSNP | MGI SNP Detail
Chr7:126582954f 1SNPGA GGGGGGGGGGGGG            A/G
rs33093323
MPD | dbSNP | MGI SNP Detail
Chr7:126583194f 1SNPAA AAAAAGGAAAAAA            A/G
rs32020536
MPD | dbSNP | MGI SNP Detail
Chr7:126583201f 2SNP  T   A         T           A/T
rs31719696
MPD | dbSNP | MGI SNP Detail
Chr7:126583207f 2SNP      A         G           A/G
rs33094575
MPD | dbSNP | MGI SNP Detail
Chr7:126583444f 1SNPCT CCCCCCCCCCCCC            C/T
rs33094577
MPD | dbSNP | MGI SNP Detail
Chr7:126583701f 2SNPCC CCCCCAACCCCCCC          AA/C
rs33094580
MPD | dbSNP | MGI SNP Detail
Chr7:126583759f 2SNPCC CCCCCTTCCCCCCC          TC/T
rs46778198
MPD | dbSNP | MGI SNP Detail
Chr7:126583823f 1SNPC     C         C          GC/G
rs32308418
MPD | dbSNP | MGI SNP Detail
Chr7:126583960f 2SNPA A   G   A     A          GA/G
rs33094583
MPD | dbSNP | MGI SNP Detail
Chr7:126584236f 1SNPGG GGGGGAAGGGGGG            A/G
rs33095326
MPD | dbSNP | MGI SNP Detail
Chr7:126584343f 1SNPAA AAAAACCAAAAAA            A/C
rs31606145
MPD | dbSNP | MGI SNP Detail
Chr7:126584365f 2SNPT T   C   T     T          CC/T
rs32356794
MPD | dbSNP | MGI SNP Detail
Chr7:126584630f 3SNPG G   G   A     AAG        GA/G
rs33088685
MPD | dbSNP | MGI SNP Detail
Chr7:126584754f 1SNPC  CCC CTTCCCCCC            C/T
rs108829393
MPD | dbSNP | MGI SNP Detail
Chr7:126584770f 1SNPG     A                     A/G
rs33088688
MPD | dbSNP | MGI SNP Detail
Chr7:126584798f 1SNPTT TTTGTTTTTTTTT            G/T
rs31785011
MPD | dbSNP | MGI SNP Detail
Chr7:126584904f 1SNPT T   C   T                 C/T
rs32284284
MPD | dbSNP | MGI SNP Detail
Chr7:126585153f 3SNPTCTTTTCTCCTTTTTTT           C/T
rs32008415
MPD | dbSNP | MGI SNP Detail
Chr7:126585221f 3SNPTCTTTTCTCCTTTTTTT           C/T
rs33089675
MPD | dbSNP | MGI SNP Detail
Chr7:126585274f 1SNPGG GGGGGAAGGGGGG            A/G
rs33089678
MPD | dbSNP | MGI SNP Detail
Chr7:126585377f 1SNPAA AAAAAGGAAAAAA            A/G
rs33089681
MPD | dbSNP | MGI SNP Detail
Chr7:126585510f 1SNPGG GGGGGAAGGGGGG            A/G
rs33089683
MPD | dbSNP | MGI SNP Detail
Chr7:126585657f 1SNPGG GGGGG  GA GGG            A/G
rs33090466
MPD | dbSNP | MGI SNP Detail
Chr7:126585670f 1SNPGG GGGGGA GGGGGG            A/G
rs32295254
MPD | dbSNP | MGI SNP Detail
Chr7:126585862f 2SNPT     C         T           C/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs32451182
MPD | dbSNP | MGI SNP Detail
Chr7:126586021f 3SNPAG AAAGAGGAAAAAAA           A/G
rs31273301
MPD | dbSNP | MGI SNP Detail
Chr7:126586186f 3SNPAG AAAGAGGAAAAAAA           A/G
rs33090470
MPD | dbSNP | MGI SNP Detail
Chr7:126586344f 1SNPTC TTTCTCCTTTTTT            C/T
rs33090472
MPD | dbSNP | MGI SNP Detail
Chr7:126586404f 1SNPGG GGGGGTTGGGGGG            G/T
rs33091715
MPD | dbSNP | MGI SNP Detail
Chr7:126586478f 1SNPGG GGGGGAAGGGGGG            A/G
rs32395807
MPD | dbSNP | MGI SNP Detail
Chr7:126586736f 3SNPGAGGGGAGGGGGGGGG            A/G
rs31579468
MPD | dbSNP | MGI SNP Detail
Chr7:126586946f 3SNPGAGGGGAGAAGGGGGG            A/G
rs32341986
MPD | dbSNP | MGI SNP Detail
Chr7:126586976f 3SNPCCCCCCTCCCCCCCCC            C/T
rs31104440
MPD | dbSNP | MGI SNP Detail
Chr7:126587031f 2SNPGAGGGGAGGGGGGGGG            A/G
rs32181615
MPD | dbSNP | MGI SNP Detail
Chr7:126587371f 2SNPAGAAAAGAGGAAAAGAA           A/G
rs33092787
MPD | dbSNP | MGI SNP Detail
Chr7:126587439f 1SNPTC TTTTTTTTTTTTT            C/T
rs33092790
MPD | dbSNP | MGI SNP Detail
Chr7:126587652f 1SNPGG GGGGGAGGGGGGG            A/G
rs33092793
MPD | dbSNP | MGI SNP Detail
Chr7:126587692f 1SNPTC TTTTTCCTTTTTT            C/T

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
06/22/2016
MGI 6.04
The Jackson Laboratory