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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Tfap2a transcription factor AP-2, alpha MGI:104671 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs29806420 MPD | dbSNP | MGI SNP Detail | Chr13:40811384 | f | Tfap2a : Locus-Region | 1 | SNP | T | C | T | T | C/T | |||||||||||||
| rs29551762 MPD | dbSNP | MGI SNP Detail | Chr13:40815084 | f | Tfap2a : Intron | 1 | SNP | G | A | A/G | |||||||||||||||
| rs29237355 MPD | dbSNP | MGI SNP Detail | Chr13:40815611 | f | Tfap2a : Intron | 1 | SNP | T | T | C | T | T | C/T | ||||||||||||
| rs29777720 MPD | dbSNP | MGI SNP Detail | Chr13:40815730 | f | Tfap2a : Intron | 1 | SNP | C | T | C | C | C/T | |||||||||||||
| rs29241396 MPD | dbSNP | MGI SNP Detail | Chr13:40816660 | f | Tfap2a : Coding-Synonymous | 1 | SNP | G | A | G | A/G | ||||||||||||||
| rs49539889 MPD | dbSNP | MGI SNP Detail | Chr13:40818609 | f | Tfap2a : Coding-Synonymous | 1 | SNP | T | T | T | T | T | T | C | T | T | T | T | C | T | C/T | ||||
| rs48695602 MPD | dbSNP | MGI SNP Detail | Chr13:40819063 | f | Tfap2a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | A | C | A/C | |||||
| rs50839287 MPD | dbSNP | MGI SNP Detail | Chr13:40819211 | f | Tfap2a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C/T | |||||||
| rs47353452 MPD | dbSNP | MGI SNP Detail | Chr13:40819783 | f | Tfap2a : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | G | T | G/T | ||||||
| rs47926650 MPD | dbSNP | MGI SNP Detail | Chr13:40820367 | f | Tfap2a : Intron | 1 | SNP | G | G | G | G | G | C | G | G | G | G | C | G | C/G | |||||
| rs47779049 MPD | dbSNP | MGI SNP Detail | Chr13:40820552 | f | Tfap2a : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||||
| rs49055452 MPD | dbSNP | MGI SNP Detail | Chr13:40820914 | f | Tfap2a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | G | C | C/G | |||||||
| rs50955976 MPD | dbSNP | MGI SNP Detail | Chr13:40821499 | f | Tfap2a : Intron | 1 | SNP | A | A | A | A | A | A | A | A | T | A | A/T | |||||||
| rs29241938 MPD | dbSNP | MGI SNP Detail | Chr13:40822048 | f | Tfap2a : Intron | 1 | SNP | C | T | C | C | C/T | |||||||||||||
| rs47487080 MPD | dbSNP | MGI SNP Detail | Chr13:40822421 | f | Tfap2a : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C/T | |||||||
| rs49441874 MPD | dbSNP | MGI SNP Detail | Chr13:40822525 | f | Tfap2a : Intron | 1 | SNP | A | A | A | A | A | A | A | A | C | A | A/C | |||||||
| rs29714248 MPD | dbSNP | MGI SNP Detail | Chr13:40822807 | f | Tfap2a : Intron | 1 | SNP | T | C | T | T | C/T | |||||||||||||
| rs29960002 MPD | dbSNP | MGI SNP Detail | Chr13:40822807 | f | Tfap2a : Intron | 1 | SNP | T | C | T | T | C/T | |||||||||||||
| rs51641045 MPD | dbSNP | MGI SNP Detail | Chr13:40823263 | f | Tfap2a : Intron | 1 | SNP | T | T | T | T | T | T | T | C | C/T | |||||||||
| rs29710917 MPD | dbSNP | MGI SNP Detail | Chr13:40823273 | f | Tfap2a : Intron | 2 | SNP | C | T | T | T | T | C | C | T | T | T | T | C | T | C/T | ||||
| rs49025496 MPD | dbSNP | MGI SNP Detail | Chr13:40823762 | f | Tfap2a : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C/T | |||||||
| rs29587448 MPD | dbSNP | MGI SNP Detail | Chr13:40824712 | f | Tfap2a : Intron | 1 | SNP | T | G | T | T | G/T | |||||||||||||
| rs29914277 MPD | dbSNP | MGI SNP Detail | Chr13:40825262 | f | Tfap2a : Intron | 1 | SNP | A | T | T | A/T | ||||||||||||||
| rs29226856 MPD | dbSNP | MGI SNP Detail | Chr13:40826809 | f | Tfap2a : Intron | 1 | SNP | C | T | C/T | |||||||||||||||
| rs29495805 MPD | dbSNP | MGI SNP Detail | Chr13:40829799 | f | Tfap2a : Intron | 1 | SNP | T | T | C | T | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/22/2013 MGI 5.13 |
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