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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Fgd1 FYVE, RhoGEF and PH domain containing 1 MGI:104566 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs33872744 MPD | dbSNP | MGI SNP Detail | ChrX:147479893 | r | Fgd1 : Locus-Region | 1 | SNP | A | C | C | A/C | ||||||||||||||
| rs33875429 MPD | dbSNP | MGI SNP Detail | ChrX:147488023 | r | Fgd1 : Intron | 1 | SNP | C | C | T | T | C/T | |||||||||||||
| rs31400825 MPD | dbSNP | MGI SNP Detail | ChrX:147488096 | r | Fgd1 : Intron | 1 | SNP | C | C | T | T | C/T | |||||||||||||
| rs31341896 MPD | dbSNP | MGI SNP Detail | ChrX:147490594 | r | Fgd1 : Intron | 1 | SNP | C | T | C/T | |||||||||||||||
| rs29296354 MPD | dbSNP | MGI SNP Detail | ChrX:147490647 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T | |||
| rs29295963 MPD | dbSNP | MGI SNP Detail | ChrX:147490861 | f | Fgd1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | C | C/G | |||
| rs29295962 MPD | dbSNP | MGI SNP Detail | ChrX:147490938 | f | Fgd1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||
| rs29295961 MPD | dbSNP | MGI SNP Detail | ChrX:147491988 | f | Fgd1 : Intron | 1 | SNP | C | T | C | T | C | C | C | T | C | T | C | C | C | C | T | C/T | ||
| rs29295960 MPD | dbSNP | MGI SNP Detail | ChrX:147492129 | f | Fgd1 : Intron | 2 | SNP | T | G | G | T | G | T | T | G | T | G | G | G | T | T | T | G | G | G/T |
| rs29295959 MPD | dbSNP | MGI SNP Detail | ChrX:147492262 | f | Fgd1 : Intron | 1 | SNP | A | A | C | A | A | A | A | A/C | ||||||||||
| rs29295958 MPD | dbSNP | MGI SNP Detail | ChrX:147492629 | f | Fgd1 : Intron | 1 | SNP | C | T | C | C | T | C | C | C | T | T | C | C | C/T | |||||
| rs29295957 MPD | dbSNP | MGI SNP Detail | ChrX:147492750 | f | Fgd1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A/G | ||
| rs29295956 MPD | dbSNP | MGI SNP Detail | ChrX:147493498 | f | Fgd1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | ||
| rs29295955 MPD | dbSNP | MGI SNP Detail | ChrX:147493524 | f | Fgd1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | G | T | T | T | T | G | T | G/T | ||
| rs29295954 MPD | dbSNP | MGI SNP Detail | ChrX:147493764 | f | Fgd1 : Intron | 1 | SNP | C | T | C | T | C | C | C | T | C | T | C | C | C | C | T | C/T | ||
| rs29295513 MPD | dbSNP | MGI SNP Detail | ChrX:147496448 | f | Fgd1 : Intron | 1 | SNP | T | C | T | C | T | T | C | T | T | T | C/T | |||||||
| rs29295512 MPD | dbSNP | MGI SNP Detail | ChrX:147496700 | f | Fgd1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A/G | |||
| rs29295511 MPD | dbSNP | MGI SNP Detail | ChrX:147496747 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | C | C | C | A/C | ||
| rs29295510 MPD | dbSNP | MGI SNP Detail | ChrX:147497288 | f | Fgd1 : Intron | 1 | SNP | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | G/T | ||
| rs29295509 MPD | dbSNP | MGI SNP Detail | ChrX:147497343 | f | Fgd1 : Intron | 1 | SNP | A | A | A | A | A | C | A | A | A | A | A | A | A | A | A/C | |||
| rs29295508 MPD | dbSNP | MGI SNP Detail | ChrX:147498079 | f | Fgd1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | ||
| rs29295507 MPD | dbSNP | MGI SNP Detail | ChrX:147498561 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C/T | ||||
| rs29295506 MPD | dbSNP | MGI SNP Detail | ChrX:147498809 | f | Fgd1 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G/T | ||
| rs29295505 MPD | dbSNP | MGI SNP Detail | ChrX:147499234 | f | Fgd1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs29295504 MPD | dbSNP | MGI SNP Detail | ChrX:147500244 | f | Fgd1 : Intron | 1 | SNP | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | |||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs29295113 MPD | dbSNP | MGI SNP Detail | ChrX:147500694 | f | Fgd1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | ||||
| rs29295112 MPD | dbSNP | MGI SNP Detail | ChrX:147500876 | f | Fgd1 : Coding-NonSynonymous | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||
| rs29295111 MPD | dbSNP | MGI SNP Detail | ChrX:147500937 | f | Fgd1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||
| rs29295110 MPD | dbSNP | MGI SNP Detail | ChrX:147501202 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs29295109 MPD | dbSNP | MGI SNP Detail | ChrX:147501367 | f | Fgd1 : Coding-NonSynonymous | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | C | T | C/T | ||||
| rs29295108 MPD | dbSNP | MGI SNP Detail | ChrX:147502008 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T | ||
| rs29295107 MPD | dbSNP | MGI SNP Detail | ChrX:147502572 | f | Fgd1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||
| rs29295106 MPD | dbSNP | MGI SNP Detail | ChrX:147502588 | f | Fgd1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A/G | ||
| rs29295105 MPD | dbSNP | MGI SNP Detail | ChrX:147502717 | f | Fgd1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | A/G | ||
| rs29295104 MPD | dbSNP | MGI SNP Detail | ChrX:147502737 | f | Fgd1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs29294693 MPD | dbSNP | MGI SNP Detail | ChrX:147503037 | f | Fgd1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | ||
| rs29294692 MPD | dbSNP | MGI SNP Detail | ChrX:147503169 | f | Fgd1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | A | G | A/G | |||
| rs29294691 MPD | dbSNP | MGI SNP Detail | ChrX:147503588 | f | Fgd1 : Intron | 2 | SNP | A | G | A | G | A | A | A | A | G | A | G | A | A | A | A | G | A/G | |
| rs29294690 MPD | dbSNP | MGI SNP Detail | ChrX:147503662 | f | Fgd1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | C | A | A | A | A | A/C | ||
| rs29294689 MPD | dbSNP | MGI SNP Detail | ChrX:147503673 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs29294688 MPD | dbSNP | MGI SNP Detail | ChrX:147503702 | f | Fgd1 : Intron | 2 | SNP | T | C | T | C | T | T | C | T | C | C | C | T | T | T | C | C | C/T | |
| rs29294687 MPD | dbSNP | MGI SNP Detail | ChrX:147503934 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs29294686 MPD | dbSNP | MGI SNP Detail | ChrX:147506139 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||
| rs29294685 MPD | dbSNP | MGI SNP Detail | ChrX:147506295 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | ||
| rs29294684 MPD | dbSNP | MGI SNP Detail | ChrX:147506568 | f | Fgd1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | ||
| rs29294283 MPD | dbSNP | MGI SNP Detail | ChrX:147507186 | f | Fgd1 : Intron | 2 | SNP | T | C | T | C | T | T | C | T | C | C | C | T | T | T | C | C | C/T | |
| rs29294282 MPD | dbSNP | MGI SNP Detail | ChrX:147507246 | f | Fgd1 : Intron | 1 | SNP | G | G | G | G | G | G | G | C | G | G | G | G | G | G | C/G | |||
| rs29294281 MPD | dbSNP | MGI SNP Detail | ChrX:147507470 | f | Fgd1 : Intron | 1 | SNP | A | C | A | C | A | A | A | C | A | C | A | A | A | A | C | A/C | ||
| rs29294280 MPD | dbSNP | MGI SNP Detail | ChrX:147507727 | f | Fgd1 : Intron | 1 | SNP | G | A | G | A | G | G | G | G | G | A | G | G | G | G | G | A/G | ||
| rs29294279 MPD | dbSNP | MGI SNP Detail | ChrX:147509244 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | A | C | C | C | C | A | C | A/C | ||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs29294278 MPD | dbSNP | MGI SNP Detail | ChrX:147509263 | f | Fgd1 : Intron | 2 | SNP | A | G | G | A | G | A | A | A | G | A | G | A | A | A | A | G | A/G | |
| rs31390741 MPD | dbSNP | MGI SNP Detail | ChrX:147509510 | r | Fgd1 : Intron | 1 | SNP | T | T | C | C | C/T | |||||||||||||
| rs31267522 MPD | dbSNP | MGI SNP Detail | ChrX:147509664 | r | Fgd1 : Intron | 1 | SNP | C | C | T | T | C/T | |||||||||||||
| rs33875389 MPD | dbSNP | MGI SNP Detail | ChrX:147509824 | r | Fgd1 : Intron | 1 | SNP | A | A | G | A/G | ||||||||||||||
| rs29294277 MPD | dbSNP | MGI SNP Detail | ChrX:147510444 | f | Fgd1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | ||
| rs29294276 MPD | dbSNP | MGI SNP Detail | ChrX:147510639 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||
| rs29294275 MPD | dbSNP | MGI SNP Detail | ChrX:147510760 | f | Fgd1 : Intron | 2 | SNP | A | C | C | A | C | A | A | C | A | C | C | C | A | A | A | C | C | A/C |
| rs29294274 MPD | dbSNP | MGI SNP Detail | ChrX:147510811 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | ||||
| rs29293953 MPD | dbSNP | MGI SNP Detail | ChrX:147510926 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | ||
| rs29293952 MPD | dbSNP | MGI SNP Detail | ChrX:147511096 | f | Fgd1 : Intron | 2 | SNP | C | T | T | C | T | C | C | T | C | T | C | C | C | T | T | C/T | ||
| rs33870194 MPD | dbSNP | MGI SNP Detail | ChrX:147511261 | r | Fgd1 : Intron | 1 | SNP | T | T | C | C | C/T | |||||||||||||
| rs29293951 MPD | dbSNP | MGI SNP Detail | ChrX:147511778 | f | Fgd1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | C | A | A | A | A | C | A | A/C | ||
| rs29293950 MPD | dbSNP | MGI SNP Detail | ChrX:147511887 | f | Fgd1 : Intron | 1 | SNP | A | A | A | A | A | A | A | G | A | A | A | G | A | A/G | ||||
| rs29293949 MPD | dbSNP | MGI SNP Detail | ChrX:147512110 | f | Fgd1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | ||
| rs29293948 MPD | dbSNP | MGI SNP Detail | ChrX:147512187 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs29293947 MPD | dbSNP | MGI SNP Detail | ChrX:147512460 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C/G | ||
| rs29293946 MPD | dbSNP | MGI SNP Detail | ChrX:147513285 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | A | C | A/C | |||
| rs29293945 MPD | dbSNP | MGI SNP Detail | ChrX:147513337 | f | Fgd1 : Intron | 2 | SNP | C | A | A | C | A | C | C | C | C | A | C | A | C | C | C | C | C | A/C |
| rs29293944 MPD | dbSNP | MGI SNP Detail | ChrX:147514089 | f | Fgd1 : Intron | 1 | SNP | G | G | G | G | G | C | G | G | G | G | G | G | G | G | G | C/G | ||
| rs29293613 MPD | dbSNP | MGI SNP Detail | ChrX:147514306 | f | Fgd1 : Intron | 1 | SNP | A | T | A | T | A | A | A | T | A | T | A | A | A | A | T | A/T | ||
| rs29293612 MPD | dbSNP | MGI SNP Detail | ChrX:147514399 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs29293611 MPD | dbSNP | MGI SNP Detail | ChrX:147514469 | f | Fgd1 : Coding-Synonymous | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | C | T | C/T | |||
| rs29293610 MPD | dbSNP | MGI SNP Detail | ChrX:147514722 | f | Fgd1 : Coding-Synonymous | 1 | SNP | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C/T | ||
| rs33867609 MPD | dbSNP | MGI SNP Detail | ChrX:147514869 | r | Fgd1 : Intron | 1 | SNP | C | T | T | C/T | ||||||||||||||
| rs29293609 MPD | dbSNP | MGI SNP Detail | ChrX:147515169 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | A | C | A/C | |||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs31297803 MPD | dbSNP | MGI SNP Detail | ChrX:147515224 | r | Fgd1 : Intron | 1 | SNP | A | G | G | A/G | ||||||||||||||
| rs29293608 MPD | dbSNP | MGI SNP Detail | ChrX:147515731 | f | Fgd1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |||
| rs29293607 MPD | dbSNP | MGI SNP Detail | ChrX:147515911 | f | Fgd1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs29293606 MPD | dbSNP | MGI SNP Detail | ChrX:147516928 | f | Fgd1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | G | A | A/G | |||
| rs29293605 MPD | dbSNP | MGI SNP Detail | ChrX:147517469 | f | Fgd1 : Intron | 1 | SNP | C | A | C | A | C | C | C | A | A | C | C | C | C | A | A/C | |||
| rs29293604 MPD | dbSNP | MGI SNP Detail | ChrX:147517909 | f | Fgd1 : Intron | 1 | SNP | T | C | T | C | T | C | T | C | C | T | T | T | C | C/T | ||||
| rs29297192 MPD | dbSNP | MGI SNP Detail | ChrX:147519161 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||
| rs29297191 MPD | dbSNP | MGI SNP Detail | ChrX:147519348 | f | Fgd1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||
| rs29297190 MPD | dbSNP | MGI SNP Detail | ChrX:147519707 | f | Fgd1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||
| rs29297189 MPD | dbSNP | MGI SNP Detail | ChrX:147519820 | f | Fgd1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||
| rs29297188 MPD | dbSNP | MGI SNP Detail | ChrX:147519866 | f | Fgd1 : Intron Tsr2 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C/T | |||
| rs29297187 MPD | dbSNP | MGI SNP Detail | ChrX:147519913 | f | Fgd1 : Intron Tsr2 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C/T | |||
| rs29297186 MPD | dbSNP | MGI SNP Detail | ChrX:147520522 | f | Fgd1 : Intron Tsr2 : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||
| rs29297185 MPD | dbSNP | MGI SNP Detail | ChrX:147520603 | f | Fgd1 : Intron Tsr2 : Locus-Region | 1 | SNP | A | A | A | A | A | T | A | A | A | A | A | A | A | A | A | A/T | ||
| rs29297184 MPD | dbSNP | MGI SNP Detail | ChrX:147522193 | f | Fgd1 : Intron Tsr2 : mRNA-UTR | 1 | SNP | C | T | C | T | C | C | C | T | T | C | C | C | C | C | C/T | |||
| rs29296753 MPD | dbSNP | MGI SNP Detail | ChrX:147522290 | f | Fgd1 : Intron Tsr2 : mRNA-UTR | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | G | A | A/G | |||
| rs29296752 MPD | dbSNP | MGI SNP Detail | ChrX:147522651 | f | Fgd1 : Coding-Synonymous Tsr2 : mRNA-UTR | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | A | T | A/T | |||
| rs29296751 MPD | dbSNP | MGI SNP Detail | ChrX:147522777 | f | Fgd1 : Intron Tsr2 : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | C | G | C/G | ||||
| rs29296750 MPD | dbSNP | MGI SNP Detail | ChrX:147522962 | f | Fgd1 : Intron Tsr2 : mRNA-UTR | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | A/G | |||
| rs29296749 MPD | dbSNP | MGI SNP Detail | ChrX:147523137 | f | Fgd1 : Intron Tsr2 : mRNA-UTR | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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