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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Cish
cytokine inducible SH2-containing protein
MGI:103159

101 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs33263290
MPD | dbSNP | MGI SNP Detail
Chr9:107294109fCish : 1917 bp upstream of
Gm17040 : within coordinates of
Ltw3 : within coordinates of
2SNPA AA       G GG    A   A          GA     A G    A A/G
rs33263292
MPD | dbSNP | MGI SNP Detail
Chr9:107294241fCish : 1785 bp upstream of
Gm17040 : within coordinates of
Ltw3 : within coordinates of
2SNPG GGGG   A AGAA    G   G          AG     G A    G A/G
rs33263964
MPD | dbSNP | MGI SNP Detail
Chr9:107294273fCish : 1753 bp upstream of
Gm17040 : within coordinates of
Ltw3 : within coordinates of
1SNPT TT T   G T T         T          T      T      T G/T
rs33263965
MPD | dbSNP | MGI SNP Detail
Chr9:107294355fCish : 1671 bp upstream of
Gm17040 : within coordinates of
Ltw3 : within coordinates of
1SNP         C A AA                   A             C A/C
rs33263967
MPD | dbSNP | MGI SNP Detail
Chr9:107294412fCish : 1614 bp upstream of
Gm17040 : within coordinates of
Ltw3 : within coordinates of
1SNPA AAAA   G A AA        A          A      A A    A A/G
rs33263969
MPD | dbSNP | MGI SNP Detail
Chr9:107294497fCish : 1529 bp upstream of
Gm17040 : within coordinates of
Ltw3 : within coordinates of
1SNPG G        T TT        G          T      G        G/T
rs33263971
MPD | dbSNP | MGI SNP Detail
Chr9:107294563fCish : 1463 bp upstream of
Gm17040 : within coordinates of
Ltw3 : within coordinates of
2SNPG GGGG   A AGA     G   G          AG     G A    G A/G
rs33263972
MPD | dbSNP | MGI SNP Detail
Chr9:107294590fCish : 1436 bp upstream of
Gm17040 : within coordinates of
Ltw3 : within coordinates of
2SNPA AAAA   C CACC    A   A          CA     A      A A/C
rs47992047
MPD | dbSNP | MGI SNP Detail
Chr9:107294634fCish : 1392 bp upstream of
Gm17040 : within coordinates of
Ltw3 : within coordinates of
1SNP                   T               T              T
rs33264974
MPD | dbSNP | MGI SNP Detail
Chr9:107294651fCish : 1375 bp upstream of
Gm17040 : within coordinates of
Ltw3 : within coordinates of
2SNPC CC     C T T     C               C     C      C C/T
rs33264976
MPD | dbSNP | MGI SNP Detail
Chr9:107294728fCish : Locus-Region
Gm17040 : within coordinates of
Ltw3 : within coordinates of
2SNPT TT T   G GTG     T   T          GT     T      T G/T
rs33264978
MPD | dbSNP | MGI SNP Detail
Chr9:107294751fCish : Locus-Region
Gm17040 : within coordinates of
Ltw3 : within coordinates of
2SNPG GGGG   G CGCC    G   G          CG     G      G C/G
rs48019479
MPD | dbSNP | MGI SNP Detail
Chr9:107294780fCish : Locus-Region
Gm17040 : within coordinates of
Ltw3 : within coordinates of
1SNP                   A               A              A
rs50536268
MPD | dbSNP | MGI SNP Detail
Chr9:107294786fCish : Locus-Region
Gm17040 : within coordinates of
Ltw3 : within coordinates of
1SNP                   A               C              A/C
rs49248438
MPD | dbSNP | MGI SNP Detail
Chr9:107294836fCish : Locus-Region
Gm17040 : within coordinates of
Ltw3 : within coordinates of
1SNP                   T               T              T
rs52468819
MPD | dbSNP | MGI SNP Detail
Chr9:107294985fCish : Locus-Region
Gm17040 : within coordinates of
Ltw3 : within coordinates of
1SNP                   G               G              G
rs237988482
MPD | dbSNP | MGI SNP Detail
Chr9:107295052fCish : Locus-Region
Gm17040 : within coordinates of
Ltw3 : within coordinates of
1SNP                   T               T              T
rs33706611
MPD | dbSNP | MGI SNP Detail
Chr9:107295420fCish : Locus-Region
Gm17040 : within coordinates of
Ltw3 : within coordinates of
2SNP  C        G       C               C              C/G
rs30123857
MPD | dbSNP | MGI SNP Detail
Chr9:107295554fCish : Locus-Region
Gm17040 : within coordinates of
Ltw3 : within coordinates of
4SNPT TTTTC  C CTCC    T   T          CT     T C    T C/T
rs29750155
MPD | dbSNP | MGI SNP Detail
Chr9:107295827fCish : Locus-Region
Gm17040 : within coordinates of
Ltw3 : within coordinates of
3SNP  A   G            A               A   G          A/G
rs29841622
MPD | dbSNP | MGI SNP Detail
Chr9:107295909fCish : Locus-Region
Gm17040 : within coordinates of
Ltw3 : within coordinates of
4SNPG GG  A  G A AA    G              AG   A G A    G A/G
rs29642704
MPD | dbSNP | MGI SNP Detail
Chr9:107295932fCish : Locus-Region
Gm17040 : within coordinates of
Ltw3 : within coordinates of
4SNPG G   A  G A A     G   G          AG   A G        A/G
rs29600524
MPD | dbSNP | MGI SNP Detail
Chr9:107296213fCish : Locus-Region
Gm17040 : within coordinates of
Ltw3 : within coordinates of
4SNPAAAAAAG  A GAGG    A   A          GA     A      A A/G
rs29840901
MPD | dbSNP | MGI SNP Detail
Chr9:107296257fCish : Locus-Region
Gm17040 : within coordinates of
Ltw3 : within coordinates of
4SNPTTT TTA  T A A     T   T           T     T      T A/T
rs30329094
MPD | dbSNP | MGI SNP Detail
Chr9:107296406fCish : Locus-Region
Gm17040 : within coordinates of
Ltw3 : within coordinates of
3SNP TT   C    C       C               T              C/T
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs29749795
MPD | dbSNP | MGI SNP Detail
Chr9:107296861fCish : mRNA-UTR
Gm17040 : within coordinates of
Ltw3 : within coordinates of
3SNP T         C       T               T              C/T
rs13473920
MPD | dbSNP | MGI SNP Detail
Chr9:107297023fCish : Coding-Synonymous
Gm17040 : within coordinates of
Ltw3 : within coordinates of
5SNPCCCCCCTTTCTTCTCCTCCCCC CCTTTTCTTCTTCC CTCCT CCCCCCC/T
rs29687922
MPD | dbSNP | MGI SNP Detail
Chr9:107297193fCish : Intron
Ltw3 : within coordinates of
4SNPAAAAA G  A G G     A   A          GA     A      A A/G
rs29595055
MPD | dbSNP | MGI SNP Detail
Chr9:107297251fCish : Intron
Ltw3 : within coordinates of
4SNPAAAAAAC  C CACC    A   A          CA     A C    A A/C
rs33257579
MPD | dbSNP | MGI SNP Detail
Chr9:107297341fCish : Intron
Ltw3 : within coordinates of
3SNPAAAA     A G G     A              GA     A      A A/G
rs47470916
MPD | dbSNP | MGI SNP Detail
Chr9:107297468fCish : Intron
Ltw3 : within coordinates of
2SNP AA                A               A              A
rs47249645
MPD | dbSNP | MGI SNP Detail
Chr9:107297646fCish : Intron
Ltw3 : within coordinates of
2SNP TT                T               T              T
rs47239737
MPD | dbSNP | MGI SNP Detail
Chr9:107297647fCish : Intron
Ltw3 : within coordinates of
2SNP AA                A               A              A
rs33257580
MPD | dbSNP | MGI SNP Detail
Chr9:107297695fCish : Intron
Ltw3 : within coordinates of
1SNPG GGGG   T GGGG        G          G      G      G G/T
rs33257581
MPD | dbSNP | MGI SNP Detail
Chr9:107297802fCish : Intron
Ltw3 : within coordinates of
3SNPTTT  T     C CC    T              CT              C/T
rs29792871
MPD | dbSNP | MGI SNP Detail
Chr9:107297836fCish : Intron
Ltw3 : within coordinates of
4SNPGGGGGG   G A AA    G   G           G     G      G A/G
rs30385748
MPD | dbSNP | MGI SNP Detail
Chr9:107297929fCish : Intron
Ltw3 : within coordinates of
4SNPCCCC     C T TT    C              TC     C      C C/T
rs33259585
MPD | dbSNP | MGI SNP Detail
Chr9:107297931fCish : Intron
Ltw3 : within coordinates of
1SNP   GGG   G AGA         A          A               A/G
rs30187630
MPD | dbSNP | MGI SNP Detail
Chr9:107298004fCish : Intron
Ltw3 : within coordinates of
4SNPAAAA     A C C     A              CA            A A/C
rs29686233
MPD | dbSNP | MGI SNP Detail
Chr9:107298091fCish : Intron
Ltw3 : within coordinates of
4SNPC CCC A  C ACAA    C   C          AC     C      C A/C
rs30428790
MPD | dbSNP | MGI SNP Detail
Chr9:107298144fCish : Intron
Ltw3 : within coordinates of
3SNP  A   G    G       A               A              A/G
rs30177506
MPD | dbSNP | MGI SNP Detail
Chr9:107298373fCish : Intron
Ltw3 : within coordinates of
4SNPTTT   C  T C CC    T   T          CT     T C    T C/T
rs30375914
MPD | dbSNP | MGI SNP Detail
Chr9:107298417fCish : Intron
Ltw3 : within coordinates of
3SNP AA   G    G       A               A              A/G
rs30036094
MPD | dbSNP | MGI SNP Detail
Chr9:107298419fCish : Intron
Ltw3 : within coordinates of
3SNP CC   T    T       C               C              C/T
rs33259590
MPD | dbSNP | MGI SNP Detail
Chr9:107298507fCish : Intron
Ltw3 : within coordinates of
4SNPTTTTT C  T CTC     T   T          CT     T      T C/T
rs51128484
MPD | dbSNP | MGI SNP Detail
Chr9:107298833fCish : Intron
Ltw3 : within coordinates of
2SNP AA                A               A              A
rs47174751
MPD | dbSNP | MGI SNP Detail
Chr9:107298889fCish : Intron
Ltw3 : within coordinates of
2SNP AA                A               G              A/G
rs48772869
MPD | dbSNP | MGI SNP Detail
Chr9:107298890fCish : Intron
Ltw3 : within coordinates of
2SNP CC                C               A              A/C
rs45846459
MPD | dbSNP | MGI SNP Detail
Chr9:107298904fCish : Intron
Ltw3 : within coordinates of
2SNP GG                G               G              G
rs33259591
MPD | dbSNP | MGI SNP Detail
Chr9:107299009fCish : Intron
Ltw3 : within coordinates of
3SNPTTT      G G G     T              GT              G/T
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs46511183
MPD | dbSNP | MGI SNP Detail
Chr9:107299248fCish : Intron
Ltw3 : within coordinates of
2SNP TT                T               T              T
rs49804901
MPD | dbSNP | MGI SNP Detail
Chr9:107299290fCish : Intron
Ltw3 : within coordinates of
2SNP AA                A               A              A
rs51708345
MPD | dbSNP | MGI SNP Detail
Chr9:107299291fCish : Intron
Ltw3 : within coordinates of
2SNP GG                G               G              G
rs33259593
MPD | dbSNP | MGI SNP Detail
Chr9:107299322fCish : Intron
Ltw3 : within coordinates of
3SNPAAAAAA     GAGG    A   A          GA     A G    A A/G
rs33260595
MPD | dbSNP | MGI SNP Detail
Chr9:107299409fCish : Intron
Ltw3 : within coordinates of
3SNPCCC      C T T     C   C          TC     C        C/T
rs33260597
MPD | dbSNP | MGI SNP Detail
Chr9:107299455fCish : Intron
Ltw3 : within coordinates of
3SNPGGGGGG   C CGCC    G   G          CG     G C    G C/G
rs33260598
MPD | dbSNP | MGI SNP Detail
Chr9:107299499fCish : Intron
Ltw3 : within coordinates of
3SNPGGG      A A A     G   G          AG            G A/G
rs49698585
MPD | dbSNP | MGI SNP Detail
Chr9:107299509fCish : Intron
Ltw3 : within coordinates of
2SNP AA                A               A              A
rs45634290
MPD | dbSNP | MGI SNP Detail
Chr9:107299585fCish : Intron
Ltw3 : within coordinates of
2SNP GG        A       G               G              A/G
rs50042565
MPD | dbSNP | MGI SNP Detail
Chr9:107299615fCish : Intron
Ltw3 : within coordinates of
2SNP GG        A       G               G              A/G
rs51806752
MPD | dbSNP | MGI SNP Detail
Chr9:107299821fCish : Intron
Ltw3 : within coordinates of
1SNP  C                                               C
rs29591127
MPD | dbSNP | MGI SNP Detail
Chr9:107300321fCish : Intron
Ltw3 : within coordinates of
4SNPTTTTTTC  C CTC     T   T          TT     T T    T C/T
rs33260601
MPD | dbSNP | MGI SNP Detail
Chr9:107300384fCish : Coding-Synonymous
Gm17041 : within coordinates of
Ltw3 : within coordinates of
1SNPT TTT    C TTT         T          T      T      T C/T
rs4227914
MPD | dbSNP | MGI SNP Detail
Chr9:107300738rCish : Coding-Synonymous
Gm17041 : within coordinates of
Ltw3 : within coordinates of
1SNP  T TTT  T T        C T                           C/T
rs4227913
MPD | dbSNP | MGI SNP Detail
Chr9:107300780rCish : Coding-Synonymous
Gm17041 : within coordinates of
Ltw3 : within coordinates of
4SNPAAAAAAG  G GAGG    AG AA          GA     A      A A/G
rs4227912
MPD | dbSNP | MGI SNP Detail
Chr9:107300844rCish : Coding-Synonymous
Gm17041 : within coordinates of
Ltw3 : within coordinates of
5SNPAAAAAAGGGGGGAGAAGAAAGAAAAGGGGAGGAGGAAAGGAAG AGGAAGA/G
rs4227911
MPD | dbSNP | MGI SNP Detail
Chr9:107300904rCish : mRNA-UTR
Gm17041 : within coordinates of
Ltw3 : within coordinates of
1SNP  T TTT  T T        C T                           C/T
rs13473922
MPD | dbSNP | MGI SNP Detail
Chr9:107301343fCish : mRNA-UTR
Gm17041 : within coordinates of
Ltw3 : within coordinates of
2SNP  T                T               T              T
rs13473921
MPD | dbSNP | MGI SNP Detail
Chr9:107301569fCish : mRNA-UTR
Gm17041 : within coordinates of
Ltw3 : within coordinates of
2SNP C                 C               C              C
rs45676911
MPD | dbSNP | MGI SNP Detail
Chr9:107301947fCish : mRNA-UTR
Ltw3 : within coordinates of
2SNP TT        G       T               T              G/T
rs48039100
MPD | dbSNP | MGI SNP Detail
Chr9:107302053fCish : Locus-Region
Ltw3 : within coordinates of
2SNP GG        A       G               G              A/G
rs51412666
MPD | dbSNP | MGI SNP Detail
Chr9:107302143fCish : Locus-Region
Ltw3 : within coordinates of
2SNP CC        T       C               C              C/T
rs50672457
MPD | dbSNP | MGI SNP Detail
Chr9:107302184fCish : Locus-Region
Ltw3 : within coordinates of
2SNP AA        G       A               A              A/G
rs48379633
MPD | dbSNP | MGI SNP Detail
Chr9:107302271fCish : Locus-Region
Ltw3 : within coordinates of
2SNP AA        G       A               A              A/G
rs33260603
MPD | dbSNP | MGI SNP Detail
Chr9:107302372fCish : Locus-Region
Ltw3 : within coordinates of
3SNPTTT      T CTCT    T   T          CT       C    T C/T
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs33261755
MPD | dbSNP | MGI SNP Detail
Chr9:107302453fCish : Locus-Region
Ltw3 : within coordinates of
3SNPCCC      C TCTC    C   C          TC     C T    C C/T
rs33261757
MPD | dbSNP | MGI SNP Detail
Chr9:107302468fCish : within coordinates of
Ltw3 : within coordinates of
3SNPAAA      G GAGA    A   A          GA       G      A/G
rs33261759
MPD | dbSNP | MGI SNP Detail
Chr9:107302518fCish : within coordinates of
Ltw3 : within coordinates of
1SNPA AAAA   G AAAA        A          A      A A    A A/G
rs33261761
MPD | dbSNP | MGI SNP Detail
Chr9:107302709fCish : within coordinates of
Ltw3 : within coordinates of
1SNPA AAAA   C AAAA        A          A      A A    A A/C
rs33261763
MPD | dbSNP | MGI SNP Detail
Chr9:107302746fCish : within coordinates of
Ltw3 : within coordinates of
3SNPAAA A    G GAGA    A   A          GA     A G    A A/G
rs49836379
MPD | dbSNP | MGI SNP Detail
Chr9:107302806fCish : 22 bp downstream of
Ltw3 : within coordinates of
2SNP TT        G       T               T              G/T
rs45637359
MPD | dbSNP | MGI SNP Detail
Chr9:107302818fCish : 34 bp downstream of
Ltw3 : within coordinates of
2SNP CC        G       C               C              C/G
rs46271166
MPD | dbSNP | MGI SNP Detail
Chr9:107302899fCish : 115 bp downstream of
Ltw3 : within coordinates of
2SNP AA        G       A               A              A/G
rs33262495
MPD | dbSNP | MGI SNP Detail
Chr9:107302947fCish : 163 bp downstream of
Ltw3 : within coordinates of
3SNPAAAAA    A GAGA    A   A          GA     A G    A A/G
rs51440173
MPD | dbSNP | MGI SNP Detail
Chr9:107303184fCish : 400 bp downstream of
Ltw3 : within coordinates of
2SNP  C        T       C               C              C/T
rs30086742
MPD | dbSNP | MGI SNP Detail
Chr9:107303290fCish : 506 bp downstream of
Ltw3 : within coordinates of
3SNP  C   T    T       C               C              C/T
rs33262497
MPD | dbSNP | MGI SNP Detail
Chr9:107303377fCish : 593 bp downstream of
Ltw3 : within coordinates of
1SNPG GGGG   A GGGG        G          G      G G    G A/G
rs29946546
MPD | dbSNP | MGI SNP Detail
Chr9:107303441fCish : 657 bp downstream of
Ltw3 : within coordinates of
3SNPT T   A    A       T               T              A/T
rs30323863
MPD | dbSNP | MGI SNP Detail
Chr9:107303459fCish : 675 bp downstream of
Ltw3 : within coordinates of
4SNPC C   T  C TCT     C   C          TC       T      C/T
rs29935815
MPD | dbSNP | MGI SNP Detail
Chr9:107303526fCish : 742 bp downstream of
Ltw3 : within coordinates of
4SNPC C   T  T T TC    C   C          TC     C T      C/T
rs30075224
MPD | dbSNP | MGI SNP Detail
Chr9:107303626fCish : 842 bp downstream of
Ltw3 : within coordinates of
4SNPA AAA C  C CACA    A   A          CA     A C    A A/C
rs29701010
MPD | dbSNP | MGI SNP Detail
Chr9:107303812fCish : 1028 bp downstream of
Ltw3 : within coordinates of
3SNPT T   G    G       T               T              G/T
rs30123626
MPD | dbSNP | MGI SNP Detail
Chr9:107303836fCish : 1052 bp downstream of
Ltw3 : within coordinates of
4SNPA AAAAT  A TATA    A   A           A     A T    A A/T
rs29641558
MPD | dbSNP | MGI SNP Detail
Chr9:107303894fCish : 1110 bp downstream of
Ltw3 : within coordinates of
4SNPT TTT A  A ATAT    T   T          AT     T A    T A/T
rs33262503
MPD | dbSNP | MGI SNP Detail
Chr9:107304018fCish : 1234 bp downstream of
Ltw3 : within coordinates of
1SNPC CC     T CCCC        C          C      C C    C C/T
rs33742087
MPD | dbSNP | MGI SNP Detail
Chr9:107304133fCish : 1349 bp downstream of
Ltw3 : within coordinates of
3SNPT T   A    A       T               T              A/T
rs30171811
MPD | dbSNP | MGI SNP Detail
Chr9:107304173fCish : 1389 bp downstream of
Ltw3 : within coordinates of
3SNPG G   A    A       G               G              A/G
rs30089007
MPD | dbSNP | MGI SNP Detail
Chr9:107304248fCish : 1464 bp downstream of
Ltw3 : within coordinates of
3SNPC C   T    T       C               C              C/T
rs33695379
MPD | dbSNP | MGI SNP Detail
Chr9:107304368fCish : 1584 bp downstream of
Ltw3 : within coordinates of
3SNPA A   C    C       A               A              A/C
rs30487538
MPD | dbSNP | MGI SNP Detail
Chr9:107304728fCish : 1944 bp downstream of
Ltw3 : within coordinates of
3SNPTTT        C       T               T              C/T
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs33718091
MPD | dbSNP | MGI SNP Detail
Chr9:107304739fCish : 1955 bp downstream of
Ltw3 : within coordinates of
3SNP AA        G       A               A              A/G

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory