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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Six1 sine oculis-related homeobox 1 MGI:102780 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs13466031 MPD | dbSNP | MGI SNP Detail | Chr12:74140915 | f | Six1 : Locus-Region | 1 | SNP | C | G | C/G | |||||||||||||||||||||||||||||||||||||||||||||
| rs45755010 MPD | dbSNP | MGI SNP Detail | Chr12:74141165 | f | Six1 : Locus-Region | 1 | SNP | G | T | T | T | T | T | T | G | T | G | T | G | G/T | |||||||||||||||||||||||||||||||||||
| rs47042783 MPD | dbSNP | MGI SNP Detail | Chr12:74141709 | f | Six1 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | T | C | T | C/T | |||||||||||||||||||||||||||||||||
| rs29217924 MPD | dbSNP | MGI SNP Detail | Chr12:74143323 | f | Six1 : mRNA-UTR | 1 | SNP | A | T | T | T | A/T | |||||||||||||||||||||||||||||||||||||||||||
| rs4229419 MPD | dbSNP | MGI SNP Detail | Chr12:74144202 | r | Six1 : mRNA-UTR | 1 | SNP | A | A | A | A | A | A | C | A | A/C | |||||||||||||||||||||||||||||||||||||||
| rs4229418 MPD | dbSNP | MGI SNP Detail | Chr12:74144226 | r | Six1 : mRNA-UTR | 1 | SNP | T | T | T | T | T | T | C | T | C/T | |||||||||||||||||||||||||||||||||||||||
| rs4229417 MPD | dbSNP | MGI SNP Detail | Chr12:74144318 | r | Six1 : mRNA-UTR | 1 | SNP | T | T | T | T | A | T | T | T | A/T | |||||||||||||||||||||||||||||||||||||||
| rs4229416 MPD | dbSNP | MGI SNP Detail | Chr12:74144321 | r | Six1 : mRNA-UTR | 3 | SNP | C | C | T | T | T | T | T | T | C | T | T | T | T | C | T | T | T | T | T | T | T | T | C | C | T | T | T | T | T | C | T | T | T | T | T | T | C | C | T | T | T | T | C | T | T | T | C/T | |
| rs4229415 MPD | dbSNP | MGI SNP Detail | Chr12:74144542 | r | Six1 : Coding-Synonymous | 2 | SNP | C | C | T | T | T | T | T | T | C | C | C/T | |||||||||||||||||||||||||||||||||||||
| rs29207150 MPD | dbSNP | MGI SNP Detail | Chr12:74144720 | f | Six1 : Coding-Synonymous | 1 | SNP | T | T | C | C | C | C/T | ||||||||||||||||||||||||||||||||||||||||||
| rs29203543 MPD | dbSNP | MGI SNP Detail | Chr12:74146641 | f | Six1 : Intron | 1 | SNP | G | A | A | A/G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/22/2013 MGI 5.13 |
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