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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Six1
sine oculis-related homeobox 1
MGI:102780

53 matching SNPs displayed
Full result set is also available in a tab-delimited format.
Include SNPs that map to multiple locations

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 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs50306992
MPD | dbSNP | MGI SNP Detail
Chr12:73038081f 1SNPT   T TTT CCTTTTTT                             C/T
rs50437502
MPD | dbSNP | MGI SNP Detail
Chr12:73038850f 1SNPTG  T   TG GT T TG                             G/T
rs50631338
MPD | dbSNP | MGI SNP Detail
Chr12:73038876f 1SNP G  C C CG GC  CCG                             C/G
rs3675661
MPD | dbSNP | MGI SNP Detail
Chr12:73038972f 3SNP  T         A     A                            A/T
rs49212448
MPD | dbSNP | MGI SNP Detail
Chr12:73039406f 1SNP                  T                            T
rs47055887
MPD | dbSNP | MGI SNP Detail
Chr12:73039597f 1SNPGA  G GGGGGAGGGGGG                             A/G
rs51993984
MPD | dbSNP | MGI SNP Detail
Chr12:73039793f 1SNPC   C CCCCTCCCCCCC                             C/T
rs13466031
MPD | dbSNP | MGI SNP Detail
Chr12:73039928f 3SNP  G     C          CG                          C/G
rs45755010
MPD | dbSNP | MGI SNP Detail
Chr12:73040178f 2SNPT   T TTT GGGTTTG G                            G/T
rs47042783
MPD | dbSNP | MGI SNP Detail
Chr12:73040722f 1SNPC   C CCCTCCCCCCCT                             C/T
rs29217924
MPD | dbSNP | MGI SNP Detail
Chr12:73042336f 2SNPT T     T         A                            A/T
rs242030736
MPD | dbSNP | MGI SNP Detail
Chr12:73042396f 1SNP                   AG                          A/G
rs4229419
MPD | dbSNP | MGI SNP Detail
Chr12:73043215r 1SNPAAA A  AA            CA                        A/C
rs4229418
MPD | dbSNP | MGI SNP Detail
Chr12:73043239r 1SNPTTT T  TT            CT                        C/T
rs4229417
MPD | dbSNP | MGI SNP Detail
Chr12:73043331r 1SNPTAT T  TT            TT                        A/T
rs4229416
MPD | dbSNP | MGI SNP Detail
Chr12:73043334r 4SNPTTTTTTTTTTC CTTTCTCTTTCTCTTCTTTTTTTTTTTCTCTTTTCC/T
rs4229415
MPD | dbSNP | MGI SNP Detail
Chr12:73043555r 3SNPTTT T  TT   C     C  CC                        C/T
rs29207150
MPD | dbSNP | MGI SNP Detail
Chr12:73043733f 1SNPC C     C   T     T                            C/T
rs257450470
MPD | dbSNP | MGI SNP Detail
Chr12:73044511f 1SNP                   AG                          A/G
rs29203543
MPD | dbSNP | MGI SNP Detail
Chr12:73045654f 1SNP  A     A         G                            A/G
rs220186157
MPD | dbSNP | MGI SNP Detail
Chr12:73046310f 1SNP                   TG                          G/T
rs29215525
MPD | dbSNP | MGI SNP Detail
Chr12:73047944f 2SNPA A     A   T     T                            A/T
rs29147876
MPD | dbSNP | MGI SNP Detail
Chr12:73048335f 2SNP        A   G     G                            A/G
rs29222691
MPD | dbSNP | MGI SNP Detail
Chr12:73048336f 2SNP        A   T     T                            A/T
rs29189344
MPD | dbSNP | MGI SNP Detail
Chr12:73048565f 2SNPA A     A   T                                  A/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs33857938
MPD | dbSNP | MGI SNP Detail
Chr12:73048985f 2SNPC       C   A     A                            A/C
rs29161064
MPD | dbSNP | MGI SNP Detail
Chr12:73049173f 1SNPA       A         T                            A/T
rs29152354
MPD | dbSNP | MGI SNP Detail
Chr12:73050344f 2SNPT T     T   C                                  C/T
rs29217477
MPD | dbSNP | MGI SNP Detail
Chr12:73050420f 2SNPG G     G   A                                  A/G
rs239858604
MPD | dbSNP | MGI SNP Detail
Chr12:73051054f 1SNP                   AG                          A/G
rs48245370
MPD | dbSNP | MGI SNP Detail
Chr12:73051499f 1SNPG       G         A                            A/G
rs45636316
MPD | dbSNP | MGI SNP Detail
Chr12:73051790f 1SNP        T         A                            A/T
rs51058789
MPD | dbSNP | MGI SNP Detail
Chr12:73052626f 1SNPGG  G GGGGA GGGGGG                             A/G
rs52029896
MPD | dbSNP | MGI SNP Detail
Chr12:73052720f 1SNPAG  A AAAAG AAAAAA                             A/G
rs50432050
MPD | dbSNP | MGI SNP Detail
Chr12:73053124f 1SNPGA  G GGGGA GGGGGG                             A/G
rs47648690
MPD | dbSNP | MGI SNP Detail
Chr12:73053202f 1SNPTG  T TTTTG TTTTTT                             G/T
rs29125065
MPD | dbSNP | MGI SNP Detail
Chr12:73053425f 2SNPGGG A GAAAG GAGAGAG                            A/G
rs259304635
MPD | dbSNP | MGI SNP Detail
Chr12:73053483f 1SNP                   AG                          A/G
rs46503628
MPD | dbSNP | MGI SNP Detail
Chr12:73053553f 1SNPTC  T TTTT  CTTTCT                             C/T
rs46162923
MPD | dbSNP | MGI SNP Detail
Chr12:73053722f 2SNPAG  G AGGG  GGGGGG GA                          A/G
rs46867538
MPD | dbSNP | MGI SNP Detail
Chr12:73053756f 1SNPAA  A AAAAG AAAAAA                             A/G
rs51573880
MPD | dbSNP | MGI SNP Detail
Chr12:73053883f 1SNPAT  A AAAAT AAAAAA                             A/T
rs259305571
MPD | dbSNP | MGI SNP Detail
Chr12:73054237f 1SNP                   CT                          C/T
rs51304482
MPD | dbSNP | MGI SNP Detail
Chr12:73054420f 1SNPCT  C CCCCC CCCCCC                             C/T
rs29164090
MPD | dbSNP | MGI SNP Detail
Chr12:73054904f 3SNPAG  A AAAAG GAAAGAG                            A/G
rs51657047
MPD | dbSNP | MGI SNP Detail
Chr12:73054957f 3SNPAG    AGGGG GGGGGGGGA                          A/G
rs228777618
MPD | dbSNP | MGI SNP Detail
Chr12:73055062f 1SNP                   AC                          A/C
rs50464001
MPD | dbSNP | MGI SNP Detail
Chr12:73055096f 3SNPAG  G AGGGG GGGGGGGGA                          A/G
rs48742757
MPD | dbSNP | MGI SNP Detail
Chr12:73055419f 1SNPCT  C CCCCT TCCCTC                             C/T
rs48338080
MPD | dbSNP | MGI SNP Detail
Chr12:73055529f 1SNPGA  G GGGGG GGGGGG                             A/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs50587915
MPD | dbSNP | MGI SNP Detail
Chr12:73055577f 1SNPG       G         A                            A/G
rs48700105
MPD | dbSNP | MGI SNP Detail
Chr12:73055579f 1SNPT       T         C                            C/T
rs29207315
MPD | dbSNP | MGI SNP Detail
Chr12:73055869f 1SNPT T     T         A                            A/T

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
04/19/2016
MGI 6.03
The Jackson Laboratory