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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Six3
sine oculis-related homeobox 3
MGI:102764

33 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs232305586
MPD | dbSNP | MGI SNP Detail
Chr17:85618968fSix3 : Locus-Region
Six3os1 : Locus-Region
1SNP            A  C    A/C
rs46711735
MPD | dbSNP | MGI SNP Detail
Chr17:85619086fSix3 : Locus-Region
Six3os1 : Locus-Region
2SNPT TTTT TTTGTTTTG TGTG/T
rs33280723
MPD | dbSNP | MGI SNP Detail
Chr17:85619196fSix3 : Locus-Region
Six3os1 : Locus-Region
3SNP CC   T T   C  CC   C/T
rs229933043
MPD | dbSNP | MGI SNP Detail
Chr17:85619279fGm27427 : within coordinates of
Six3 : Locus-Region
Six3os1 : Locus-Region
1SNP            A  T    A/T
rs108672727
MPD | dbSNP | MGI SNP Detail
Chr17:85619685fSix3 : Locus-Region
Six3os1 : Locus-Region
1SNP            A  G    A/G
rs213793658
MPD | dbSNP | MGI SNP Detail
Chr17:85619764fSix3 : Locus-Region
Six3os1 : Locus-Region
1SNP            A  G    A/G
rs233216641
MPD | dbSNP | MGI SNP Detail
Chr17:85620250fSix3 : Locus-Region
Six3os1 : Locus-Region
1SNP            G  A    A/G
rs258868479
MPD | dbSNP | MGI SNP Detail
Chr17:85620459fSix3 : Locus-Region1SNP            T  A    A/T
rs225523296
MPD | dbSNP | MGI SNP Detail
Chr17:85621119fSix3 : mRNA-UTR1SNP            C  T    C/T
rs107763965
MPD | dbSNP | MGI SNP Detail
Chr17:85621740fSix3 : Coding-Synonymous1SNP            G  G    G
rs29520250
MPD | dbSNP | MGI SNP Detail
Chr17:85622100fSix3 : Intron2SNP  G   T T           G/T
rs264419023
MPD | dbSNP | MGI SNP Detail
Chr17:85622774fSix3 : Intron1SNP            A  G    A/G
rs33326533
MPD | dbSNP | MGI SNP Detail
Chr17:85622791fSix3 : Intron3SNPG G   A A   G  G    A/G
rs108486095
MPD | dbSNP | MGI SNP Detail
Chr17:85622815fSix3 : Intron1SNP            C  T    C/T
rs254445164
MPD | dbSNP | MGI SNP Detail
Chr17:85622915fSix3 : Intron1SNP            G  A    A/G
rs107839810
MPD | dbSNP | MGI SNP Detail
Chr17:85623021fSix3 : Intron1SNP            T  A    A/T
rs246730655
MPD | dbSNP | MGI SNP Detail
Chr17:85623042fSix3 : Intron1SNP            A  T    A/T
rs108446813
MPD | dbSNP | MGI SNP Detail
Chr17:85623214fSix3 : Intron1SNP            T  T    T
rs232919403
MPD | dbSNP | MGI SNP Detail
Chr17:85623395fSix3 : Intron1SNP            T  C    C/T
rs108101166
MPD | dbSNP | MGI SNP Detail
Chr17:85623419fSix3 : Intron1SNP            T  C    C/T
rs107676939
MPD | dbSNP | MGI SNP Detail
Chr17:85625306fSix3 : mRNA-UTR1SNP            A  G    A/G
rs108109329
MPD | dbSNP | MGI SNP Detail
Chr17:85626043fSix3 : mRNA-UTR1SNP  T     G           G/T
rs33887163
MPD | dbSNP | MGI SNP Detail
Chr17:85626886fSix3 : 695 bp downstream of3SNP AA     C   A  A    A/C
rs107739450
MPD | dbSNP | MGI SNP Detail
Chr17:85626909fSix3 : 718 bp downstream of1SNP            A  G    A/G
rs108580883
MPD | dbSNP | MGI SNP Detail
Chr17:85627275fSix3 : 1084 bp downstream of1SNP            G  G    G
SNP ID
(dbSNP Build 137)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs233132493
MPD | dbSNP | MGI SNP Detail
Chr17:85627306fSix3 : 1115 bp downstream of1SNP            G  A    A/G
rs257467539
MPD | dbSNP | MGI SNP Detail
Chr17:85627473fSix3 : 1282 bp downstream of1SNP            C  T    C/T
rs217158142
MPD | dbSNP | MGI SNP Detail
Chr17:85627529fSix3 : 1338 bp downstream of1SNP            C  T    C/T
rs242387240
MPD | dbSNP | MGI SNP Detail
Chr17:85627671fSix3 : 1480 bp downstream of1SNP            C  G    C/G
rs108565769
MPD | dbSNP | MGI SNP Detail
Chr17:85627711fSix3 : 1520 bp downstream of1SNP            A  G    A/G
rs218258798
MPD | dbSNP | MGI SNP Detail
Chr17:85627727fSix3 : 1536 bp downstream of1SNP            C  T    C/T
rs229659123
MPD | dbSNP | MGI SNP Detail
Chr17:85628082fSix3 : 1891 bp downstream of1SNP            C  T    C/T
rs33887722
MPD | dbSNP | MGI SNP Detail
Chr17:85628167fSix3 : 1976 bp downstream of3SNP AA   G     A  A    A/G

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory