About   Help   FAQ
Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Six3
sine oculis-related homeobox 3
MGI:102764

91 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs33553462
MPD | dbSNP | MGI SNP Detail
Chr17:85611703f 2SNPG G   A         A   A/G
rs33105834
MPD | dbSNP | MGI SNP Detail
Chr17:85611712f 4SNPCCCCT TCCCCTTTCTTTC C/T
rs33416166
MPD | dbSNP | MGI SNP Detail
Chr17:85611822f 4SNPGGGGAAAGGGAAAAGAAAG A/G
rs108885169
MPD | dbSNP | MGI SNP Detail
Chr17:85611992f 1SNP                 TA A/T
rs50982241
MPD | dbSNP | MGI SNP Detail
Chr17:85612176f 1SNPGA GGGGGGGGGGGGG    A/G
rs259476551
MPD | dbSNP | MGI SNP Detail
Chr17:85612306f 1SNP                 GA A/G
rs231772249
MPD | dbSNP | MGI SNP Detail
Chr17:85612614f 1SNP                 GA A/G
rs245914943
MPD | dbSNP | MGI SNP Detail
Chr17:85612677f 1SNP                 GT G/T
rs107932813
MPD | dbSNP | MGI SNP Detail
Chr17:85612687f 1SNP                 AG A/G
rs33450583
MPD | dbSNP | MGI SNP Detail
Chr17:85612801f 4SNPGAGGAAAGA AAAAGA AA A/G
rs242104627
MPD | dbSNP | MGI SNP Detail
Chr17:85612840f 1SNP                 CT C/T
rs212806272
MPD | dbSNP | MGI SNP Detail
Chr17:85612846f 1SNP                 GA A/G
rs108562722
MPD | dbSNP | MGI SNP Detail
Chr17:85613772f 1SNP                 CG C/G
rs244566019
MPD | dbSNP | MGI SNP Detail
Chr17:85613881f 1SNP                 GT G/T
rs52031980
MPD | dbSNP | MGI SNP Detail
Chr17:85614217f 1SNPGC GGGGGGGGGGGGG    C/G
rs108441254
MPD | dbSNP | MGI SNP Detail
Chr17:85614615f 1SNP                 TA A/T
rs33394257
MPD | dbSNP | MGI SNP Detail
Chr17:85614938f 4SNPAGAAGGGAG GGG AGGGG A/G
rs260297471
MPD | dbSNP | MGI SNP Detail
Chr17:85615717f 1SNP                 CG C/G
rs219304540
MPD | dbSNP | MGI SNP Detail
Chr17:85615822f 1SNP                 CT C/T
rs49916779
MPD | dbSNP | MGI SNP Detail
Chr17:85615862f 2SNPGG GGGGGAAGGGGGG GA A/G
rs49128928
MPD | dbSNP | MGI SNP Detail
Chr17:85615941f 2SNPTC TT TTC TTTT T TC C/T
rs108151404
MPD | dbSNP | MGI SNP Detail
Chr17:85616035f 1SNP                 CG C/G
rs108255606
MPD | dbSNP | MGI SNP Detail
Chr17:85616046f 1SNP                 TG G/T
rs49650797
MPD | dbSNP | MGI SNP Detail
Chr17:85616575f 2SNPTT TTTTTAATTTTTT TA A/T
rs108722971
MPD | dbSNP | MGI SNP Detail
Chr17:85617117f 1SNP                 GA A/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs47291022
MPD | dbSNP | MGI SNP Detail
Chr17:85617243f 2SNPGG GGGGGAAGGGGGG GA A/G
rs107694604
MPD | dbSNP | MGI SNP Detail
Chr17:85617759f 1SNP                 GC C/G
rs33635979
MPD | dbSNP | MGI SNP Detail
Chr17:85617766f 4SNPAG AGGGA  GGGGAG GG A/G
rs235722661
MPD | dbSNP | MGI SNP Detail
Chr17:85617987f 1SNP                 CT C/T
rs254415359
MPD | dbSNP | MGI SNP Detail
Chr17:85617988f 1SNP                 AG A/G
rs33703017
MPD | dbSNP | MGI SNP Detail
Chr17:85618159f 3SNPG G   C         CCC C/G
rs33581155
MPD | dbSNP | MGI SNP Detail
Chr17:85618184f 3SNPT T   C         CCT C/T
rs49014181
MPD | dbSNP | MGI SNP Detail
Chr17:85618306f 2SNPCG CCCCCGGCCCCCC CG C/G
rs232305586
MPD | dbSNP | MGI SNP Detail
Chr17:85618968f 1SNP                 AC A/C
rs46711735
MPD | dbSNP | MGI SNP Detail
Chr17:85619086f 2SNPTT TTTTTGGTTTTTT TG G/T
rs33280723
MPD | dbSNP | MGI SNP Detail
Chr17:85619196f 3SNPT T   C         CCCCC/T
rs229933043
MPD | dbSNP | MGI SNP Detail
Chr17:85619279f 1SNP                 AT A/T
rs108672727
MPD | dbSNP | MGI SNP Detail
Chr17:85619685f 1SNP                 AG A/G
rs213793658
MPD | dbSNP | MGI SNP Detail
Chr17:85619764f 1SNP                 AG A/G
rs233216641
MPD | dbSNP | MGI SNP Detail
Chr17:85620250f 1SNP                 GA A/G
rs258868479
MPD | dbSNP | MGI SNP Detail
Chr17:85620459f 1SNP                 TA A/T
rs225523296
MPD | dbSNP | MGI SNP Detail
Chr17:85621119f 1SNP                 CT C/T
rs107763965
MPD | dbSNP | MGI SNP Detail
Chr17:85621740f 1SNP                 GG G
rs29520250
MPD | dbSNP | MGI SNP Detail
Chr17:85622100f 2SNPT T   G             G/T
rs264419023
MPD | dbSNP | MGI SNP Detail
Chr17:85622774f 1SNP                 AG A/G
rs33326533
MPD | dbSNP | MGI SNP Detail
Chr17:85622791f 3SNPA A   G   G      GG A/G
rs108486095
MPD | dbSNP | MGI SNP Detail
Chr17:85622815f 1SNP                 CT C/T
rs254445164
MPD | dbSNP | MGI SNP Detail
Chr17:85622915f 1SNP                 GA A/G
rs107839810
MPD | dbSNP | MGI SNP Detail
Chr17:85623021f 1SNP                 TA A/T
rs246730655
MPD | dbSNP | MGI SNP Detail
Chr17:85623042f 1SNP                 AT A/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs108446813
MPD | dbSNP | MGI SNP Detail
Chr17:85623214f 1SNP                 TT T
rs232919403
MPD | dbSNP | MGI SNP Detail
Chr17:85623395f 1SNP                 TC C/T
rs108101166
MPD | dbSNP | MGI SNP Detail
Chr17:85623419f 1SNP                 TC C/T
rs107676939
MPD | dbSNP | MGI SNP Detail
Chr17:85625306f 1SNP                 AG A/G
rs108109329
MPD | dbSNP | MGI SNP Detail
Chr17:85626043f 1SNPG     T             G/T
rs33887163
MPD | dbSNP | MGI SNP Detail
Chr17:85626886f 3SNPC     A         AAA A/C
rs107739450
MPD | dbSNP | MGI SNP Detail
Chr17:85626909f 1SNP                 AG A/G
rs108580883
MPD | dbSNP | MGI SNP Detail
Chr17:85627275f 1SNP                 GG G
rs233132493
MPD | dbSNP | MGI SNP Detail
Chr17:85627306f 1SNP                 GA A/G
rs257467539
MPD | dbSNP | MGI SNP Detail
Chr17:85627473f 1SNP                 CT C/T
rs217158142
MPD | dbSNP | MGI SNP Detail
Chr17:85627529f 1SNP                 CT C/T
rs242387240
MPD | dbSNP | MGI SNP Detail
Chr17:85627671f 1SNP                 CG C/G
rs108565769
MPD | dbSNP | MGI SNP Detail
Chr17:85627711f 1SNP                 AG A/G
rs218258798
MPD | dbSNP | MGI SNP Detail
Chr17:85627727f 1SNP                 CT C/T
rs229659123
MPD | dbSNP | MGI SNP Detail
Chr17:85628082f 1SNP                 CT C/T
rs33887722
MPD | dbSNP | MGI SNP Detail
Chr17:85628167f 3SNP  G   A         AAA A/G
rs219092662
MPD | dbSNP | MGI SNP Detail
Chr17:85628364f 1SNP                 AG A/G
rs107696939
MPD | dbSNP | MGI SNP Detail
Chr17:85628384f 1SNP                 AG A/G
rs265438901
MPD | dbSNP | MGI SNP Detail
Chr17:85628724f 1SNP                 GT G/T
rs108881047
MPD | dbSNP | MGI SNP Detail
Chr17:85628840f 1SNP                 CC C
rs249946635
MPD | dbSNP | MGI SNP Detail
Chr17:85629423f 1SNP                 CG C/G
rs108182192
MPD | dbSNP | MGI SNP Detail
Chr17:85629537f 1SNP                 TC C/T
rs48894463
MPD | dbSNP | MGI SNP Detail
Chr17:85629683f 2SNPTT TTTT C  TT TT TC C/T
rs244254612
MPD | dbSNP | MGI SNP Detail
Chr17:85629788f 1SNP                 TC C/T
rs257656234
MPD | dbSNP | MGI SNP Detail
Chr17:85629932f 1SNP                 TA A/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs107925194
MPD | dbSNP | MGI SNP Detail
Chr17:85629944f 1SNP                 AC A/C
rs252481984
MPD | dbSNP | MGI SNP Detail
Chr17:85630037f 1SNP                 GA A/G
rs108679270
MPD | dbSNP | MGI SNP Detail
Chr17:85630080f 1SNP                 CG C/G
rs239788306
MPD | dbSNP | MGI SNP Detail
Chr17:85630116f 1SNP                 AC A/C
rs260428429
MPD | dbSNP | MGI SNP Detail
Chr17:85630311f 1SNP                 AT A/T
rs212461415
MPD | dbSNP | MGI SNP Detail
Chr17:85630322f 1SNP                 GA A/G
rs107871531
MPD | dbSNP | MGI SNP Detail
Chr17:85630418f 1SNP                 CT C/T
rs108101437
MPD | dbSNP | MGI SNP Detail
Chr17:85630466f 1SNP      C         C   C
rs46994073
MPD | dbSNP | MGI SNP Detail
Chr17:85630494f 2SNPTC TTTT C TTTTTT TC C/T
rs213380518
MPD | dbSNP | MGI SNP Detail
Chr17:85630553f 1SNP                 CT C/T
rs107890232
MPD | dbSNP | MGI SNP Detail
Chr17:85630631f 1SNP                 CA A/C
rs108545327
MPD | dbSNP | MGI SNP Detail
Chr17:85630693f 1SNP      A             A
rs48561079
MPD | dbSNP | MGI SNP Detail
Chr17:85630740f 1SNPA  TT T A    AA     A/T
rs258442939
MPD | dbSNP | MGI SNP Detail
Chr17:85630793f 1SNP                 CT C/T
rs107765155
MPD | dbSNP | MGI SNP Detail
Chr17:85631012f 1SNP                 CG C/G
rs108837677
MPD | dbSNP | MGI SNP Detail
Chr17:85631022f 1SNP                 TC C/T

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
05/17/2016
MGI 6.03
The Jackson Laboratory