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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Cst3 cystatin C MGI:102519 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs28325513 MPD | dbSNP | MGI SNP Detail | Chr2:148695650 | f | Cst3 : Locus-Region | 1 | SNP | T | T | T | C | C/T | ||||||||||||||
| rs27261942 MPD | dbSNP | MGI SNP Detail | Chr2:148695990 | f | Cst3 : Locus-Region | 1 | SNP | C | C | C | A | A/C | ||||||||||||||
| rs27261941 MPD | dbSNP | MGI SNP Detail | Chr2:148696190 | f | Cst3 : Locus-Region | 1 | SNP | G | G | G | A | A/G | ||||||||||||||
| rs29502523 MPD | dbSNP | MGI SNP Detail | Chr2:148696493 | f | Cst3 : Locus-Region | 1 | SNP | T | T | C | T | C | C/T | |||||||||||||
| rs27261940 MPD | dbSNP | MGI SNP Detail | Chr2:148696525 | f | Cst3 : Locus-Region | 1 | SNP | A | A | A | G | A/G | ||||||||||||||
| rs27261939 MPD | dbSNP | MGI SNP Detail | Chr2:148696621 | f | Cst3 : Locus-Region | 1 | SNP | C | C | C | T | C/T | ||||||||||||||
| rs33664750 MPD | dbSNP | MGI SNP Detail | Chr2:148696824 | f | Cst3 : Locus-Region | 1 | SNP | T | C | T | C | C/T | ||||||||||||||
| rs27261938 MPD | dbSNP | MGI SNP Detail | Chr2:148696998 | f | Cst3 : Locus-Region | 1 | SNP | A | A | A | G | A/G | ||||||||||||||
| rs29817475 MPD | dbSNP | MGI SNP Detail | Chr2:148697088 | f | Cst3 : Locus-Region | 1 | SNP | G | T | G/T | ||||||||||||||||
| rs27261937 MPD | dbSNP | MGI SNP Detail | Chr2:148697164 | f | Cst3 : Locus-Region | 1 | SNP | A | A | A | G | A/G | ||||||||||||||
| rs27261936 MPD | dbSNP | MGI SNP Detail | Chr2:148697430 | f | Cst3 : Locus-Region | 1 | SNP | A | A | G | A | A/G | ||||||||||||||
| rs27261935 MPD | dbSNP | MGI SNP Detail | Chr2:148697452 | f | Cst3 : Locus-Region | 1 | SNP | A | A | A | G | A/G | ||||||||||||||
| rs29557246 MPD | dbSNP | MGI SNP Detail | Chr2:148697496 | f | Cst3 : mRNA-UTR | 1 | SNP | A | G | A/G | ||||||||||||||||
| rs33128608 MPD | dbSNP | MGI SNP Detail | Chr2:148697497 | f | Cst3 : mRNA-UTR | 1 | SNP | T | C | C/T | ||||||||||||||||
| rs27261934 MPD | dbSNP | MGI SNP Detail | Chr2:148697583 | f | Cst3 : mRNA-UTR | 1 | SNP | G | G | G | A | A/G | ||||||||||||||
| rs27261933 MPD | dbSNP | MGI SNP Detail | Chr2:148697608 | f | Cst3 : mRNA-UTR | 1 | SNP | G | G | G | A | A/G | ||||||||||||||
| rs8256617 MPD | dbSNP | MGI SNP Detail | Chr2:148697668 | f | Cst3 : mRNA-UTR | 3 | SNP | A | G | A | A | G | A | A | A | A | A | G | G | G | G | A | G | A/G | ||
| rs8256618 MPD | dbSNP | MGI SNP Detail | Chr2:148697674 | f | Cst3 : mRNA-UTR | 1 | SNP | A | A | A | A | A | A | A | A | A | A | G | A | A/G | ||||||
| rs8256619 MPD | dbSNP | MGI SNP Detail | Chr2:148697708 | f | Cst3 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | A | G | G | G | G | A/G | ||||||
| rs27261932 MPD | dbSNP | MGI SNP Detail | Chr2:148697787 | f | Cst3 : Intron | 2 | SNP | A | C | A | A | C | A | A | A/C | |||||||||||
| rs8256620 MPD | dbSNP | MGI SNP Detail | Chr2:148697903 | f | Cst3 : Intron | 2 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | G | A/G | ||
| rs8256621 MPD | dbSNP | MGI SNP Detail | Chr2:148697919 | f | Cst3 : Intron | 1 | SNP | T | T | T | T | T | T | T | C | T | T | T | T | C/T | ||||||
| rs8256622 MPD | dbSNP | MGI SNP Detail | Chr2:148697941 | f | Cst3 : Intron | 2 | SNP | T | C | T | C | C | T | C | C | C | T | T | C | C | C/T | |||||
| rs27261931 MPD | dbSNP | MGI SNP Detail | Chr2:148697967 | f | Cst3 : Intron | 1 | SNP | A | A | A | G | A/G | ||||||||||||||
| rs27261930 MPD | dbSNP | MGI SNP Detail | Chr2:148698000 | f | Cst3 : Intron | 1 | SNP | G | G | G | A | A/G | ||||||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27261929 MPD | dbSNP | MGI SNP Detail | Chr2:148698112 | f | Cst3 : Intron | 1 | SNP | A | C | A | A | A/C | ||||||||||||||
| rs27261928 MPD | dbSNP | MGI SNP Detail | Chr2:148698169 | f | Cst3 : Intron | 1 | SNP | G | A | G | A | A/G | ||||||||||||||
| rs33547649 MPD | dbSNP | MGI SNP Detail | Chr2:148698281 | f | Cst3 : Intron | 1 | SNP | G | G | A | G | A | A/G | |||||||||||||
| rs27261927 MPD | dbSNP | MGI SNP Detail | Chr2:148698288 | f | Cst3 : Intron | 1 | SNP | C | C | T | C/T | |||||||||||||||
| rs27261926 MPD | dbSNP | MGI SNP Detail | Chr2:148698331 | f | Cst3 : Intron | 1 | SNP | G | G | G | A | A/G | ||||||||||||||
| rs27261925 MPD | dbSNP | MGI SNP Detail | Chr2:148698372 | f | Cst3 : Intron | 1 | SNP | C | G | C | C | C/G | ||||||||||||||
| rs32957054 MPD | dbSNP | MGI SNP Detail | Chr2:148698443 | f | Cst3 : Intron | 1 | SNP | T | T | C | T | C | C/T | |||||||||||||
| rs29730428 MPD | dbSNP | MGI SNP Detail | Chr2:148698446 | f | Cst3 : Intron | 1 | SNP | T | T | C | T | C | C/T | |||||||||||||
| rs27261924 MPD | dbSNP | MGI SNP Detail | Chr2:148698549 | f | Cst3 : Intron | 1 | SNP | C | C | C | A | A/C | ||||||||||||||
| rs27261923 MPD | dbSNP | MGI SNP Detail | Chr2:148698672 | f | Cst3 : Intron | 1 | SNP | G | G | G | A | A/G | ||||||||||||||
| rs27261922 MPD | dbSNP | MGI SNP Detail | Chr2:148698760 | f | Cst3 : Intron | 1 | SNP | A | T | A | T | A/T | ||||||||||||||
| rs27261921 MPD | dbSNP | MGI SNP Detail | Chr2:148698955 | f | Cst3 : Intron | 1 | SNP | A | T | A | A | A/T | ||||||||||||||
| rs27261920 MPD | dbSNP | MGI SNP Detail | Chr2:148699041 | f | Cst3 : Intron | 1 | SNP | C | C | G | C | C/G | ||||||||||||||
| rs27261919 MPD | dbSNP | MGI SNP Detail | Chr2:148699133 | f | Cst3 : Intron | 1 | SNP | A | G | A | G | A/G | ||||||||||||||
| rs27261918 MPD | dbSNP | MGI SNP Detail | Chr2:148699239 | f | Cst3 : Intron | 1 | SNP | C | T | C | T | C/T | ||||||||||||||
| rs29733168 MPD | dbSNP | MGI SNP Detail | Chr2:148699444 | f | Cst3 : Intron | 1 | SNP | T | C | C | C/T | |||||||||||||||
| rs27261917 MPD | dbSNP | MGI SNP Detail | Chr2:148699457 | f | Cst3 : Intron | 1 | SNP | A | C | A | C | A/C | ||||||||||||||
| rs33111612 MPD | dbSNP | MGI SNP Detail | Chr2:148699484 | f | Cst3 : Intron | 1 | SNP | T | C | C | C/T | |||||||||||||||
| rs29626381 MPD | dbSNP | MGI SNP Detail | Chr2:148699813 | f | Cst3 : Intron | 1 | SNP | G | G | C | G | C/G | ||||||||||||||
| rs27261916 MPD | dbSNP | MGI SNP Detail | Chr2:148699884 | f | Cst3 : Intron | 2 | SNP | T | T | C | T | C | C | C | T | C/T | ||||||||||
| rs27261915 MPD | dbSNP | MGI SNP Detail | Chr2:148700471 | f | Cst3 : Intron | 1 | SNP | A | A | A | G | A/G | ||||||||||||||
| rs27261914 MPD | dbSNP | MGI SNP Detail | Chr2:148700485 | f | Cst3 : Intron | 1 | SNP | T | A | T | A | A/T | ||||||||||||||
| rs27261913 MPD | dbSNP | MGI SNP Detail | Chr2:148700544 | f | Cst3 : Intron | 1 | SNP | C | C | C | C | A | A/C | |||||||||||||
| rs27261912 MPD | dbSNP | MGI SNP Detail | Chr2:148700644 | f | Cst3 : Intron | 1 | SNP | G | C | G | G | C/G | ||||||||||||||
| rs27261911 MPD | dbSNP | MGI SNP Detail | Chr2:148700792 | f | Cst3 : Intron | 1 | SNP | C | C | C | T | C/T | ||||||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27261910 MPD | dbSNP | MGI SNP Detail | Chr2:148700885 | f | Cst3 : Intron | 1 | SNP | A | G | A | G | A/G | ||||||||||||||
| rs27261909 MPD | dbSNP | MGI SNP Detail | Chr2:148700932 | f | Cst3 : Coding-NonSynonymous | 1 | SNP | A | G | G | G | A/G | ||||||||||||||
| rs27261908 MPD | dbSNP | MGI SNP Detail | Chr2:148701033 | f | Cst3 : Coding-Synonymous | 1 | SNP | C | C | C | C | T | C/T | |||||||||||||
| rs27261907 MPD | dbSNP | MGI SNP Detail | Chr2:148701656 | f | Cst3 : Locus-Region | 1 | SNP | T | G | T | G | G/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 06/05/2013 MGI 5.13 |
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