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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Vcp valosin containing protein MGI:99919 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs27851314 MPD | dbSNP | MGI SNP Detail | Chr4:42990920 | f | Vcp : Locus-Region | 1 | SNP | T | C | T | T | C | T | T | C | T | C | T | C | T | C/T | ||||
| rs27851313 MPD | dbSNP | MGI SNP Detail | Chr4:42992250 | f | Vcp : Locus-Region | 1 | SNP | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||||
| rs27851312 MPD | dbSNP | MGI SNP Detail | Chr4:42992771 | f | Vcp : Locus-Region | 1 | SNP | T | T | C | T | C | T | T | C | T | C | C | T | C/T | |||||
| rs27851311 MPD | dbSNP | MGI SNP Detail | Chr4:42992816 | f | Vcp : Locus-Region | 1 | SNP | T | T | C | T | T | C | T | T | C | T | C | C | T | C/T | ||||
| rs3141948 MPD | dbSNP | MGI SNP Detail | Chr4:42993302 | r | Vcp : mRNA-UTR | 1 | SNP | T | T | C | T | T | C | T | T | C | T | C | C | T | C/T | ||||
| rs27851309 MPD | dbSNP | MGI SNP Detail | Chr4:42993914 | f | Vcp : Intron | 1 | SNP | C | C | T | C | C | T | C | C | T | C | T | T | C | C/T | ||||
| rs27851308 MPD | dbSNP | MGI SNP Detail | Chr4:42993956 | f | Vcp : Intron | 1 | SNP | C | C | T | C | C | T | C | C | T | C | T | C | C/T | |||||
| rs27851307 MPD | dbSNP | MGI SNP Detail | Chr4:42994039 | f | Vcp : Intron | 1 | SNP | T | C | T | T | C | T | C | T | C | C | T | C/T | ||||||
| rs27851306 MPD | dbSNP | MGI SNP Detail | Chr4:42994108 | f | Vcp : Intron | 1 | SNP | C | C | C | C | T | C | C | C | C | C | C | C | C/T | |||||
| rs27851305 MPD | dbSNP | MGI SNP Detail | Chr4:42994229 | f | Vcp : Intron | 1 | SNP | T | C | T | T | C | T | T | C | T | C | C | T | C/T | |||||
| rs27851304 MPD | dbSNP | MGI SNP Detail | Chr4:42995134 | f | Vcp : Intron | 1 | SNP | C | C | A | C | C | A | C | C | C | A | C | A | A | C | A/C | |||
| rs27851303 MPD | dbSNP | MGI SNP Detail | Chr4:42995191 | f | Vcp : Intron | 1 | SNP | G | G | A | G | G | A | G | G | A | G | A | A | G | A/G | ||||
| rs27851302 MPD | dbSNP | MGI SNP Detail | Chr4:42995206 | f | Vcp : Intron | 1 | SNP | G | G | A | G | G | A | G | G | G | A | G | A | A | G | A/G | |||
| rs27851301 MPD | dbSNP | MGI SNP Detail | Chr4:42995294 | f | Vcp : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | T | G | G/T | |||||
| rs27851300 MPD | dbSNP | MGI SNP Detail | Chr4:42995685 | f | Vcp : Intron | 1 | SNP | T | T | C | T | T | C | T | T | T | C | T | C | T | C | T | C/T | ||
| rs13466401 MPD | dbSNP | MGI SNP Detail | Chr4:42995959 | r | Vcp : Coding-Synonymous | 1 | SNP | A | A | T | A | A | T | A | A | A | T | A | T | A | T | A | A/T | ||
| rs27851298 MPD | dbSNP | MGI SNP Detail | Chr4:42996155 | f | Vcp : Intron | 1 | SNP | G | G | A | G | G | A | G | G | G | A | G | A | G | A | G | A/G | ||
| rs27851297 MPD | dbSNP | MGI SNP Detail | Chr4:42996392 | f | Vcp : Coding-Synonymous | 1 | SNP | G | G | A | G | G | A | G | G | G | A | G | G | G | G | A/G | |||
| rs27851296 MPD | dbSNP | MGI SNP Detail | Chr4:42997079 | f | Vcp : Intron | 1 | SNP | A | A | A | A | T | A | A | A | T | A | T | A | A | A/T | ||||
| rs27851295 MPD | dbSNP | MGI SNP Detail | Chr4:42997586 | f | Vcp : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | G/T | ||
| rs27851294 MPD | dbSNP | MGI SNP Detail | Chr4:42998187 | f | Vcp : Intron | 1 | SNP | A | A | G | A | A | G | A | A | A | G | A | G | A | G | A | A/G | ||
| rs27851293 MPD | dbSNP | MGI SNP Detail | Chr4:42998613 | f | Vcp : Intron | 1 | SNP | A | A | G | A | A | G | A | A | A | G | A | G | A | G | A | A/G | ||
| rs27851292 MPD | dbSNP | MGI SNP Detail | Chr4:43000109 | f | Vcp : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||
| rs27851291 MPD | dbSNP | MGI SNP Detail | Chr4:43000841 | f | Vcp : Intron | 1 | SNP | T | T | C | T | T | C | T | T | T | C | T | C | T | C | T | C/T | ||
| rs27851290 MPD | dbSNP | MGI SNP Detail | Chr4:43001721 | f | Vcp : Intron | 1 | SNP | G | G | G | G | A | G | G | A | G | A | G | A | G | A/G | ||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27851289 MPD | dbSNP | MGI SNP Detail | Chr4:43001766 | f | Vcp : Intron | 1 | SNP | T | T | C | T | T | C | T | T | T | C | T | C | T | T | T | C/T | ||
| rs3141947 MPD | dbSNP | MGI SNP Detail | Chr4:43001966 | r | Vcp : Intron | 1 | SNP | T | C | T | T | C/T | |||||||||||||
| rs27851288 MPD | dbSNP | MGI SNP Detail | Chr4:43002026 | f | Vcp : Intron | 1 | SNP | A | A | G | A | A | G | A | A | A | G | A | G | A | G | A | A/G | ||
| rs27851287 MPD | dbSNP | MGI SNP Detail | Chr4:43002240 | f | Vcp : Intron | 1 | SNP | A | A | G | A | G | A | A | A | G | A | G | A | G | A | A/G | |||
| rs27851286 MPD | dbSNP | MGI SNP Detail | Chr4:43002425 | f | Vcp : Intron | 1 | SNP | A | A | T | A | A | T | A | A | A | T | A | T | A | T | A | A/T | ||
| rs27851285 MPD | dbSNP | MGI SNP Detail | Chr4:43002469 | f | Vcp : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||
| rs27851284 MPD | dbSNP | MGI SNP Detail | Chr4:43003201 | f | Vcp : Intron | 1 | SNP | T | T | C | T | T | C | T | T | T | C | T | C | T | C | T | C/T | ||
| rs27851283 MPD | dbSNP | MGI SNP Detail | Chr4:43003225 | f | Vcp : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||
| rs27851282 MPD | dbSNP | MGI SNP Detail | Chr4:43003636 | f | Vcp : Coding-Synonymous | 1 | SNP | A | A | G | A | A | G | A | A | A | G | A | G | A | G | A | A/G | ||
| rs27851281 MPD | dbSNP | MGI SNP Detail | Chr4:43003738 | f | Vcp : Coding-Synonymous | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | T | T | C/T | ||
| rs27851280 MPD | dbSNP | MGI SNP Detail | Chr4:43003851 | f | Vcp : Intron | 1 | SNP | A | A | T | A | A | T | A | A | A | T | A | T | A | T | A | A/T | ||
| rs27851279 MPD | dbSNP | MGI SNP Detail | Chr4:43004104 | f | Vcp : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||
| rs27851278 MPD | dbSNP | MGI SNP Detail | Chr4:43004207 | f | Vcp : Intron | 1 | SNP | A | A | C | A | A | C | A | A | A | C | A | C | A | A | A/C | |||
| rs3141946 MPD | dbSNP | MGI SNP Detail | Chr4:43004446 | r | Vcp : Intron | 1 | SNP | C | T | C | T | C/T | |||||||||||||
| rs27851277 MPD | dbSNP | MGI SNP Detail | Chr4:43004506 | f | Vcp : Intron | 1 | SNP | C | C | T | C | C | T | C | C | C | T | C | T | C | C | C/T | |||
| rs27851276 MPD | dbSNP | MGI SNP Detail | Chr4:43004751 | f | Vcp : Intron | 1 | SNP | C | C | T | C | C | T | C | C | C | T | C | T | C | C | C/T | |||
| rs27851275 MPD | dbSNP | MGI SNP Detail | Chr4:43004783 | f | Vcp : Intron | 1 | SNP | T | T | A | T | T | A | T | T | T | A | T | A | T | T | A/T | |||
| rs27851274 MPD | dbSNP | MGI SNP Detail | Chr4:43005772 | f | Vcp : Intron | 1 | SNP | G | G | A | G | G | A | G | G | G | A | G | A | G | G | A/G | |||
| rs27851273 MPD | dbSNP | MGI SNP Detail | Chr4:43006027 | f | Vcp : Coding-Synonymous | 1 | SNP | C | C | T | C | C | T | C | C | C | T | C | T | C | T | C | C/T | ||
| rs27851272 MPD | dbSNP | MGI SNP Detail | Chr4:43006207 | f | Vcp : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||
| rs27851271 MPD | dbSNP | MGI SNP Detail | Chr4:43006221 | f | Vcp : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||
| rs27851270 MPD | dbSNP | MGI SNP Detail | Chr4:43006315 | f | Vcp : Intron | 1 | SNP | G | G | G | G | A | G | G | G | G | G | G | A/G | ||||||
| rs27851269 MPD | dbSNP | MGI SNP Detail | Chr4:43006325 | f | Vcp : Intron | 1 | SNP | G | G | A | G | G | G | G | G | G | A | G | A | G | G | G | A/G | ||
| rs27851268 MPD | dbSNP | MGI SNP Detail | Chr4:43006461 | f | Vcp : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||
| rs27830267 MPD | dbSNP | MGI SNP Detail | Chr4:43006510 | f | Vcp : Intron | 1 | SNP | C | C | A | C | C | C | C | C | C | A | C | A | C | C | A/C | |||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27830266 MPD | dbSNP | MGI SNP Detail | Chr4:43006658 | f | Vcp : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||
| rs27830265 MPD | dbSNP | MGI SNP Detail | Chr4:43006902 | f | Vcp : Intron | 1 | SNP | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | G/T | ||
| rs27830264 MPD | dbSNP | MGI SNP Detail | Chr4:43007009 | f | Vcp : Intron | 1 | SNP | T | T | T | T | C | T | T | T | C | T | C | T | C | T | C/T | |||
| rs27830263 MPD | dbSNP | MGI SNP Detail | Chr4:43007057 | f | Vcp : Intron | 1 | SNP | G | G | A | G | G | G | G | G | G | A | G | A | G | G | G | A/G | ||
| rs27830262 MPD | dbSNP | MGI SNP Detail | Chr4:43007162 | f | Vcp : Intron | 1 | SNP | T | T | C | T | T | C | T | T | T | C | T | C | T | C | T | C/T | ||
| rs27830261 MPD | dbSNP | MGI SNP Detail | Chr4:43007331 | f | Vcp : Intron | 1 | SNP | G | G | A | G | G | A | G | G | G | A | G | A | G | A | G | A/G | ||
| rs27830260 MPD | dbSNP | MGI SNP Detail | Chr4:43007444 | f | Vcp : Intron | 1 | SNP | G | G | C | G | G | G | G | G | G | C | G | C | G | G | G | C/G | ||
| rs27830259 MPD | dbSNP | MGI SNP Detail | Chr4:43007545 | f | Vcp : Intron | 1 | SNP | C | C | T | C | C | T | C | C | T | T | C | T | C | C/T | ||||
| rs27830258 MPD | dbSNP | MGI SNP Detail | Chr4:43007902 | f | Vcp : Intron | 1 | SNP | C | C | T | C | C | C | C | C | C | T | C | T | C | C | C | C/T | ||
| rs27830257 MPD | dbSNP | MGI SNP Detail | Chr4:43008427 | f | Vcp : Intron | 1 | SNP | G | G | T | G | G | T | G | G | G | T | G | T | G | T | G | G/T | ||
| rs27830256 MPD | dbSNP | MGI SNP Detail | Chr4:43008899 | f | Vcp : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||
| rs27830255 MPD | dbSNP | MGI SNP Detail | Chr4:43009042 | f | Vcp : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||
| rs27830254 MPD | dbSNP | MGI SNP Detail | Chr4:43009088 | f | Vcp : Intron | 1 | SNP | C | C | T | C | C | T | C | C | C | T | C | T | C | T | C | C/T | ||
| rs27830253 MPD | dbSNP | MGI SNP Detail | Chr4:43009304 | f | Vcp : Intron | 1 | SNP | A | A | G | A | A | G | A | A | A | G | A | G | A | G | A | A/G | ||
| rs27830252 MPD | dbSNP | MGI SNP Detail | Chr4:43009331 | f | Vcp : Intron | 1 | SNP | G | G | A | G | G | A | G | G | G | A | G | A | G | A | G | A/G | ||
| rs3141945 MPD | dbSNP | MGI SNP Detail | Chr4:43009410 | r | Vcp : Intron | 1 | SNP | A | A | G | A | A | G | A | A | A | G | G | G | A | G | A | A/G | ||
| rs27830251 MPD | dbSNP | MGI SNP Detail | Chr4:43009653 | f | Vcp : Intron | 1 | SNP | C | C | T | C | C | C | C | C | T | C | T | C | T | C | C/T | |||
| rs3147302 MPD | dbSNP | MGI SNP Detail | Chr4:43009747 | r | Vcp : Intron | 1 | SNP | C | T | C | T | C | C/T | ||||||||||||
| rs27830250 MPD | dbSNP | MGI SNP Detail | Chr4:43009979 | f | Vcp : Intron | 1 | SNP | A | A | G | A | A | G | A | A | A | G | A | G | A | G | A | A/G | ||
| rs27830249 MPD | dbSNP | MGI SNP Detail | Chr4:43011037 | f | Vcp : Intron | 1 | SNP | C | C | T | C | C | T | C | C | C | T | C | T | C | T | C | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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