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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Mecp2 methyl CpG binding protein 2 MGI:99918 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs29038791 MPD | dbSNP | MGI SNP Detail | ChrX:71272560 | f | Mecp2 : mRNA-UTR | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G |
| rs29038790 MPD | dbSNP | MGI SNP Detail | ChrX:71272892 | f | Mecp2 : mRNA-UTR | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T |
| rs29038789 MPD | dbSNP | MGI SNP Detail | ChrX:71274233 | f | Mecp2 : mRNA-UTR | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T |
| rs29038788 MPD | dbSNP | MGI SNP Detail | ChrX:71274662 | f | Mecp2 : mRNA-UTR | 1 | SNP | A | A | A | A | A | A | G | A | A | A | A | A/G | ||||
| rs29038787 MPD | dbSNP | MGI SNP Detail | ChrX:71275853 | f | Mecp2 : mRNA-UTR | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C/T |
| rs29038786 MPD | dbSNP | MGI SNP Detail | ChrX:71276119 | f | Mecp2 : mRNA-UTR | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T |
| rs31667753 MPD | dbSNP | MGI SNP Detail | ChrX:71277674 | f | Mecp2 : mRNA-UTR | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T |
| rs29038785 MPD | dbSNP | MGI SNP Detail | ChrX:71277704 | f | Mecp2 : mRNA-UTR | 1 | SNP | A | A | A | A | A | C | A | A | C | A | A | A | A | A | A | A/C |
| rs29038784 MPD | dbSNP | MGI SNP Detail | ChrX:71279166 | f | Mecp2 : mRNA-UTR | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C/T | |
| rs29038403 MPD | dbSNP | MGI SNP Detail | ChrX:71279461 | f | Mecp2 : mRNA-UTR | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T |
| rs29038402 MPD | dbSNP | MGI SNP Detail | ChrX:71280573 | f | Mecp2 : mRNA-UTR | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G |
| rs29038401 MPD | dbSNP | MGI SNP Detail | ChrX:71280893 | f | Mecp2 : Coding-NonSynonymous | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T |
| rs29038400 MPD | dbSNP | MGI SNP Detail | ChrX:71281550 | f | Mecp2 : Coding-NonSynonymous | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C/G |
| rs29038398 MPD | dbSNP | MGI SNP Detail | ChrX:71281967 | f | Mecp2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T |
| rs29038397 MPD | dbSNP | MGI SNP Detail | ChrX:71281990 | f | Mecp2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T |
| rs29038396 MPD | dbSNP | MGI SNP Detail | ChrX:71282587 | f | Mecp2 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T |
| rs29038395 MPD | dbSNP | MGI SNP Detail | ChrX:71282617 | f | Mecp2 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T |
| rs31667752 MPD | dbSNP | MGI SNP Detail | ChrX:71283075 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | T | G | G/T | |||
| rs29038394 MPD | dbSNP | MGI SNP Detail | ChrX:71283218 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T |
| rs29038143 MPD | dbSNP | MGI SNP Detail | ChrX:71283262 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G |
| rs29038142 MPD | dbSNP | MGI SNP Detail | ChrX:71283291 | f | Mecp2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T |
| rs29038141 MPD | dbSNP | MGI SNP Detail | ChrX:71283317 | f | Mecp2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T |
| rs29038140 MPD | dbSNP | MGI SNP Detail | ChrX:71283341 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T |
| rs29038139 MPD | dbSNP | MGI SNP Detail | ChrX:71283580 | f | Mecp2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T |
| rs29038138 MPD | dbSNP | MGI SNP Detail | ChrX:71283733 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | G | G | A/G |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs29038137 MPD | dbSNP | MGI SNP Detail | ChrX:71283838 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | T | G | G | G | G | G | G | G/T |
| rs29038136 MPD | dbSNP | MGI SNP Detail | ChrX:71283862 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | C | G | G | C | G | G | G | G | G | G | C/G |
| rs31667751 MPD | dbSNP | MGI SNP Detail | ChrX:71283900 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G |
| rs29038135 MPD | dbSNP | MGI SNP Detail | ChrX:71283903 | f | Mecp2 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | A | C | C | C | C | C | C | A/C |
| rs29038134 MPD | dbSNP | MGI SNP Detail | ChrX:71284003 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T |
| rs29037933 MPD | dbSNP | MGI SNP Detail | ChrX:71284258 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | T | G | G | G | G | T | G | G/T |
| rs29037932 MPD | dbSNP | MGI SNP Detail | ChrX:71284429 | f | Mecp2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C/T |
| rs29037931 MPD | dbSNP | MGI SNP Detail | ChrX:71284523 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T |
| rs31667750 MPD | dbSNP | MGI SNP Detail | ChrX:71284608 | f | Mecp2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G |
| rs29037930 MPD | dbSNP | MGI SNP Detail | ChrX:71284907 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | T | G | T | T | G | T | T | T | T | G | T | G/T |
| rs29037929 MPD | dbSNP | MGI SNP Detail | ChrX:71284933 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T |
| rs31667749 MPD | dbSNP | MGI SNP Detail | ChrX:71285211 | f | Mecp2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G |
| rs31667748 MPD | dbSNP | MGI SNP Detail | ChrX:71285704 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | T | G | G | G | G | T | G | G/T |
| rs29037928 MPD | dbSNP | MGI SNP Detail | ChrX:71285967 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | A | T | T | T | T | A | T | A/T |
| rs29037927 MPD | dbSNP | MGI SNP Detail | ChrX:71286112 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | A | T | T | T | T | A | T | A/T |
| rs29037926 MPD | dbSNP | MGI SNP Detail | ChrX:71286155 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T |
| rs29037925 MPD | dbSNP | MGI SNP Detail | ChrX:71287964 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | C | G | G | C | G | G | G | G | C | G | C/G |
| rs29037924 MPD | dbSNP | MGI SNP Detail | ChrX:71288013 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | T | G | G | T | G | G | G | G | T | G | G/T |
| rs29037763 MPD | dbSNP | MGI SNP Detail | ChrX:71288447 | f | Mecp2 : Intron | 1 | SNP | C | C | C | C | C | G | C | C | G | C | C | C | C | C | C | C/G |
| rs29037762 MPD | dbSNP | MGI SNP Detail | ChrX:71288448 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | T | T | T | G | T | T | T | T | G | T | G/T | |
| rs29037761 MPD | dbSNP | MGI SNP Detail | ChrX:71288479 | f | Mecp2 : Intron | 1 | SNP | A | G | G | A | A | A/G | ||||||||||
| rs31667747 MPD | dbSNP | MGI SNP Detail | ChrX:71289072 | f | Mecp2 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | ||
| rs31667746 MPD | dbSNP | MGI SNP Detail | ChrX:71289270 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||
| rs29037760 MPD | dbSNP | MGI SNP Detail | ChrX:71289544 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | T | G | T | T | G | T | T | T | T | G | T | G/T |
| rs29037759 MPD | dbSNP | MGI SNP Detail | ChrX:71290469 | f | Mecp2 : Intron | 1 | SNP | A | A | A | A | A | T | A | A | T | A | A | A | A | T | A | A/T |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs29037758 MPD | dbSNP | MGI SNP Detail | ChrX:71290585 | f | Mecp2 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G |
| rs31667745 MPD | dbSNP | MGI SNP Detail | ChrX:71291043 | f | Mecp2 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T |
| rs29037757 MPD | dbSNP | MGI SNP Detail | ChrX:71291220 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | G | A | G | A/G |
| rs29037756 MPD | dbSNP | MGI SNP Detail | ChrX:71291239 | f | Mecp2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C/T |
| rs29037755 MPD | dbSNP | MGI SNP Detail | ChrX:71291483 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | A | G | A | G | G | G | G | G | A/G | ||
| rs29037754 MPD | dbSNP | MGI SNP Detail | ChrX:71292178 | f | Mecp2 : Intron | 1 | SNP | C | C | C | C | C | T | C | T | C | C | C | C | C | C | C/T | |
| rs29037603 MPD | dbSNP | MGI SNP Detail | ChrX:71292539 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | A | G | A | G | G | A | G | A/G | |||
| rs29037602 MPD | dbSNP | MGI SNP Detail | ChrX:71293087 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | T | C | T | C | T | T | T | T | T | C/T | ||
| rs31667744 MPD | dbSNP | MGI SNP Detail | ChrX:71294513 | f | Mecp2 : Intron | 1 | SNP | G | A | G | A | G | A | A | G | G | G | G | G | A | G | A/G | |
| rs31667013 MPD | dbSNP | MGI SNP Detail | ChrX:71294798 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | C | G | G | G | G | G | C | G | C/G | ||
| rs29037601 MPD | dbSNP | MGI SNP Detail | ChrX:71294800 | f | Mecp2 : Intron | 1 | SNP | A | A | A | A | A | A | T | A | A | A | A | A | A/T | |||
| rs29037600 MPD | dbSNP | MGI SNP Detail | ChrX:71295143 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | T | A | T | A | T | T | T | T | T | A/T | ||
| rs31667012 MPD | dbSNP | MGI SNP Detail | ChrX:71295399 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | G | T | T | T | T | T | T | G | T | G/T | ||
| rs29037598 MPD | dbSNP | MGI SNP Detail | ChrX:71295544 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | T | C | T | C | T | T | T | T | T | C/T | ||
| rs29037597 MPD | dbSNP | MGI SNP Detail | ChrX:71296777 | f | Mecp2 : Intron | 1 | SNP | C | C | C | C | C | G | C | G | C | C | C | C | G | C | C/G | |
| rs29037596 MPD | dbSNP | MGI SNP Detail | ChrX:71296904 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | A | G | A | G | G | G | G | G | G | A/G | |
| rs31667011 MPD | dbSNP | MGI SNP Detail | ChrX:71297267 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | G | T | G/T | |
| rs29037594 MPD | dbSNP | MGI SNP Detail | ChrX:71297671 | f | Mecp2 : Intron | 1 | SNP | T | T | T | T | T | C | T | C | T | T | T | C | T | C/T | ||
| rs29038067 MPD | dbSNP | MGI SNP Detail | ChrX:71299076 | f | Mecp2 : Intron | 1 | SNP | C | C | C | C | C | T | C | T | C | C | C | C | C | C | C/T | |
| rs29038066 MPD | dbSNP | MGI SNP Detail | ChrX:71299607 | f | Mecp2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T |
| rs31667010 MPD | dbSNP | MGI SNP Detail | ChrX:71300620 | f | Mecp2 : Intron | 1 | SNP | A | A | A | A | A | T | A | A | A | A | A | A | A | A/T | ||
| rs31667009 MPD | dbSNP | MGI SNP Detail | ChrX:71303352 | f | Mecp2 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G |
| rs29038065 MPD | dbSNP | MGI SNP Detail | ChrX:71309602 | f | Mecp2 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T |
| rs29038064 MPD | dbSNP | MGI SNP Detail | ChrX:71309636 | f | Mecp2 : Intron | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |
| rs31667008 MPD | dbSNP | MGI SNP Detail | ChrX:71312530 | f | Mecp2 : Intron | 1 | SNP | G | G | G | A | G | A/G | ||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs29037783 MPD | dbSNP | MGI SNP Detail | ChrX:71312552 | f | Mecp2 : Intron | 1 | SNP | T | G | T | G/T | ||||||||||||
| rs29037782 MPD | dbSNP | MGI SNP Detail | ChrX:71312946 | f | Mecp2 : Intron | 1 | SNP | G | A | G | A/G | ||||||||||||
| rs29037781 MPD | dbSNP | MGI SNP Detail | ChrX:71316607 | f | Mecp2 : Intron | 1 | SNP | T | C | C | C/T | ||||||||||||
| rs29037779 MPD | dbSNP | MGI SNP Detail | ChrX:71317544 | f | Mecp2 : Intron | 1 | SNP | G | A | G | A/G | ||||||||||||
| rs29037778 MPD | dbSNP | MGI SNP Detail | ChrX:71317746 | f | Mecp2 : Intron | 1 | SNP | A | C | C | A | A/C | |||||||||||
| rs29037777 MPD | dbSNP | MGI SNP Detail | ChrX:71317892 | f | Mecp2 : Intron | 1 | SNP | C | A | A | C | A/C | |||||||||||
| rs29037776 MPD | dbSNP | MGI SNP Detail | ChrX:71318240 | f | Mecp2 : Intron | 1 | SNP | T | C | T | C/T | ||||||||||||
| rs29037775 MPD | dbSNP | MGI SNP Detail | ChrX:71318375 | f | Mecp2 : Intron | 1 | SNP | C | T | C | C/T | ||||||||||||
| rs29037774 MPD | dbSNP | MGI SNP Detail | ChrX:71318482 | f | Mecp2 : Intron | 1 | SNP | A | G | A | A/G | ||||||||||||
| rs31667007 MPD | dbSNP | MGI SNP Detail | ChrX:71319505 | f | Mecp2 : Intron | 1 | SNP | G | A | G | G | A | A/G | ||||||||||
| rs29037563 MPD | dbSNP | MGI SNP Detail | ChrX:71319575 | f | Mecp2 : Intron | 1 | SNP | C | T | C | C | C | C/T | ||||||||||
| rs29037562 MPD | dbSNP | MGI SNP Detail | ChrX:71319590 | f | Mecp2 : Intron | 1 | SNP | C | T | C | C | T | C/T | ||||||||||
| rs29037561 MPD | dbSNP | MGI SNP Detail | ChrX:71319680 | f | Mecp2 : Intron | 1 | SNP | G | A | G | G | A | A/G | ||||||||||
| rs29037560 MPD | dbSNP | MGI SNP Detail | ChrX:71319712 | f | Mecp2 : Intron | 1 | SNP | A | A | A | A | C | A | A/C | |||||||||
| rs29037559 MPD | dbSNP | MGI SNP Detail | ChrX:71319980 | f | Mecp2 : Intron | 1 | SNP | G | C | G | C | G | G | C | C/G |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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