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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Zscan21 zinc finger and SCAN domain containing 21 MGI:99182 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs50554445 MPD | dbSNP | MGI SNP Detail | Chr5:138556685 | f | Zscan21 : Locus-Region | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T | ||||
| rs33673392 MPD | dbSNP | MGI SNP Detail | Chr5:138557342 | f | Zscan21 : Locus-Region | 1 | SNP | G | C | G | C | C/G | |||||||||||||||
| rs48746363 MPD | dbSNP | MGI SNP Detail | Chr5:138558101 | f | Zscan21 : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | G | A | A | A | A/G | ||||
| rs49683033 MPD | dbSNP | MGI SNP Detail | Chr5:138558381 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | A | C | C | C | C | C | C | A/C | ||||
| rs46339029 MPD | dbSNP | MGI SNP Detail | Chr5:138558490 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||||
| rs49441467 MPD | dbSNP | MGI SNP Detail | Chr5:138558555 | f | Zscan21 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A/G | ||||
| rs47049361 MPD | dbSNP | MGI SNP Detail | Chr5:138558595 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | ||||
| rs49345586 MPD | dbSNP | MGI SNP Detail | Chr5:138558609 | f | Zscan21 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | A | T | T | T | T | A | T | A/T | ||||
| rs50545277 MPD | dbSNP | MGI SNP Detail | Chr5:138558708 | f | Zscan21 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | T | A | A | A | A | A | A | A/T | ||||
| rs48563807 MPD | dbSNP | MGI SNP Detail | Chr5:138558719 | f | Zscan21 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A/G | ||||
| rs50232233 MPD | dbSNP | MGI SNP Detail | Chr5:138558875 | f | Zscan21 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | G | G | A/G | ||||
| rs46293221 MPD | dbSNP | MGI SNP Detail | Chr5:138558959 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | G | C | C/G | |||||
| rs49914093 MPD | dbSNP | MGI SNP Detail | Chr5:138558964 | f | Zscan21 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A | A/G | ||||
| rs29731530 MPD | dbSNP | MGI SNP Detail | Chr5:138559152 | f | Zscan21 : Intron | 2 | SNP | A | G | A | G | G | G | G | G | G | G | A | G | G | A | A/G | |||||
| rs46259105 MPD | dbSNP | MGI SNP Detail | Chr5:138559426 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||||
| rs47399408 MPD | dbSNP | MGI SNP Detail | Chr5:138559464 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||||
| rs49950605 MPD | dbSNP | MGI SNP Detail | Chr5:138560525 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | T | C | C/T | ||||||
| rs51455164 MPD | dbSNP | MGI SNP Detail | Chr5:138560559 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||||
| rs47899697 MPD | dbSNP | MGI SNP Detail | Chr5:138560560 | f | Zscan21 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | A/G | ||||
| rs48702449 MPD | dbSNP | MGI SNP Detail | Chr5:138560592 | f | Zscan21 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | ||||
| rs52040352 MPD | dbSNP | MGI SNP Detail | Chr5:138560669 | f | Zscan21 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | ||||
| rs51044386 MPD | dbSNP | MGI SNP Detail | Chr5:138560705 | f | Zscan21 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | T | G | G/T | |||||
| rs52539007 MPD | dbSNP | MGI SNP Detail | Chr5:138560774 | f | Zscan21 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | A | T | T | T | T | A | T | A/T | ||||
| rs47208066 MPD | dbSNP | MGI SNP Detail | Chr5:138560815 | f | Zscan21 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | T | T | T | T | T | T | T | A/T | ||||
| rs51502037 MPD | dbSNP | MGI SNP Detail | Chr5:138561761 | f | Zscan21 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | G | T | G/T | ||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs48109642 MPD | dbSNP | MGI SNP Detail | Chr5:138561776 | f | Zscan21 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||||
| rs33322592 MPD | dbSNP | MGI SNP Detail | Chr5:138564011 | f | Zscan21 : Intron | 1 | SNP | C | C | T | T | C/T | |||||||||||||||
| rs49573259 MPD | dbSNP | MGI SNP Detail | Chr5:138564391 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | G | C | C | C | C | C | C | C | G | C | C/G | ||||
| rs47916586 MPD | dbSNP | MGI SNP Detail | Chr5:138564445 | f | Zscan21 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | T | C/T | ||||
| rs46485623 MPD | dbSNP | MGI SNP Detail | Chr5:138564471 | f | Zscan21 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||||
| rs47238011 MPD | dbSNP | MGI SNP Detail | Chr5:138564561 | f | Zscan21 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | G | A | A/G | |||||
| rs47051760 MPD | dbSNP | MGI SNP Detail | Chr5:138564595 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | T | C | C/T | ||||
| rs48324331 MPD | dbSNP | MGI SNP Detail | Chr5:138564764 | f | Zscan21 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | ||||
| rs49795095 MPD | dbSNP | MGI SNP Detail | Chr5:138564933 | f | Zscan21 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | T | A | A | A | A | T | A | A/T | ||||
| rs46621589 MPD | dbSNP | MGI SNP Detail | Chr5:138565053 | f | Zscan21 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||||
| rs51842111 MPD | dbSNP | MGI SNP Detail | Chr5:138565250 | f | Zscan21 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | C | C | C/T | ||||
| rs50981153 MPD | dbSNP | MGI SNP Detail | Chr5:138565417 | f | Zscan21 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | G | A | A | A | A | A | A/G | |||||
| rs46125787 MPD | dbSNP | MGI SNP Detail | Chr5:138565585 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | C | C | C | C | C | C | A/C | |||||
| rs48667208 MPD | dbSNP | MGI SNP Detail | Chr5:138565684 | f | Zscan21 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | G | T | G/T | |||||
| rs49856428 MPD | dbSNP | MGI SNP Detail | Chr5:138565794 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||||
| rs48080858 MPD | dbSNP | MGI SNP Detail | Chr5:138565849 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | T | C | C/T | ||||
| rs51870833 MPD | dbSNP | MGI SNP Detail | Chr5:138565910 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | T | C | C/T | ||||
| rs49404738 MPD | dbSNP | MGI SNP Detail | Chr5:138566057 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||||
| rs48500797 MPD | dbSNP | MGI SNP Detail | Chr5:138566468 | f | Zscan21 : Coding-Synonymous | 1 | SNP | T | T | T | T | T | A | T | T | A | T | T | T | A | A/T | ||||||
| rs48979381 MPD | dbSNP | MGI SNP Detail | Chr5:138566951 | f | Zscan21 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | A | G | G | G | G | A | G | A/G | ||||
| rs48365954 MPD | dbSNP | MGI SNP Detail | Chr5:138567828 | f | Zscan21 : Coding-NonSynonymous | 1 | SNP | G | G | G | G | G | G | G | G | C | G | G | G | G | G | G | C/G | ||||
| rs50956871 MPD | dbSNP | MGI SNP Detail | Chr5:138568119 | f | Zscan21 : Intron | 1 | SNP | T | T | T | T | T | G | T | T | T | T | T | T | T | T | T | G/T | ||||
| rs47734301 MPD | dbSNP | MGI SNP Detail | Chr5:138568173 | f | Zscan21 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | A | A | A/G | ||||
| rs51622167 MPD | dbSNP | MGI SNP Detail | Chr5:138568504 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | T | C | C | C | C | C | C | C/T | ||||
| rs51149067 MPD | dbSNP | MGI SNP Detail | Chr5:138568592 | f | Zscan21 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | C | T | T | T | T | T | T | C/T | ||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs50401247 MPD | dbSNP | MGI SNP Detail | Chr5:138568628 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | G | C | C | G | C | C | C | C | C | C | C/G | ||||
| rs33753402 MPD | dbSNP | MGI SNP Detail | Chr5:138568944 | f | Zscan21 : Intron | 1 | SNP | T | C | C | C/T | ||||||||||||||||
| rs48141549 MPD | dbSNP | MGI SNP Detail | Chr5:138569276 | f | Zscan21 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | A | A | A/G | ||||
| rs49343018 MPD | dbSNP | MGI SNP Detail | Chr5:138569348 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | A | C | C | A | C | C | C | C | C | C | A/C | ||||
| rs47729362 MPD | dbSNP | MGI SNP Detail | Chr5:138569362 | f | Zscan21 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | A | T | T | T | T | T | T | A/T | ||||
| rs46102828 MPD | dbSNP | MGI SNP Detail | Chr5:138571385 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | ||||
| rs46888062 MPD | dbSNP | MGI SNP Detail | Chr5:138571390 | f | Zscan21 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C/T | ||||
| rs51400772 MPD | dbSNP | MGI SNP Detail | Chr5:138572825 | f | Zscan21 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | A | T | T | T | T | T | T | A/T | ||||
| rs47079542 MPD | dbSNP | MGI SNP Detail | Chr5:138573702 | f | Zscan21 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | G | A | A | A | A | G | A | A/G | ||||
| rs49974965 MPD | dbSNP | MGI SNP Detail | Chr5:138573802 | f | Zscan21 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | T | A | A | A | A | T | A | A/T | ||||
| rs50688622 MPD | dbSNP | MGI SNP Detail | Chr5:138573805 | f | Zscan21 : Intron | 1 | SNP | C | G | C | G | G | C | G | G | C | G | G | C | G | C | C | C/G | ||||
| rs51283741 MPD | dbSNP | MGI SNP Detail | Chr5:138573903 | f | Zscan21 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | C | G | G | G | G | G | G | C/G | ||||
| rs48402329 MPD | dbSNP | MGI SNP Detail | Chr5:138573980 | f | Zscan21 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | A | T | T | T | T | T | T | A/T | ||||
| rs48424498 MPD | dbSNP | MGI SNP Detail | Chr5:138574310 | f | Zscan21 : Coding-NonSynonymous | 1 | SNP | C | C | C | C | C | G | C | C | G | C | C | C | C | C | C | C/G | ||||
| rs13472882 MPD | dbSNP | MGI SNP Detail | Chr5:138574325 | f | Zscan21 : Coding-Synonymous | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | A | A | A | A | A/G | ||||
| rs47184090 MPD | dbSNP | MGI SNP Detail | Chr5:138574487 | f | Zscan21 : Coding-Synonymous | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | ||||
| rs46243108 MPD | dbSNP | MGI SNP Detail | Chr5:138575137 | f | Zscan21 : mRNA-UTR | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||||
| rs51324479 MPD | dbSNP | MGI SNP Detail | Chr5:138575168 | f | Zscan21 : mRNA-UTR | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | G | G | G | A/G | ||||
| rs4225523 MPD | dbSNP | MGI SNP Detail | Chr5:138575644 | f | Zscan21 : Locus-Region | 1 | SNP | G | G | G | G | G | G | T | G | G/T | |||||||||||
| rs4225524 MPD | dbSNP | MGI SNP Detail | Chr5:138575716 | f | Zscan21 : Locus-Region | 1 | SNP | C | C | C | C | T | C | C | C | C/T | |||||||||||
| rs47281755 MPD | dbSNP | MGI SNP Detail | Chr5:138575735 | f | Zscan21 : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | C/T | ||||
| rs4225525 MPD | dbSNP | MGI SNP Detail | Chr5:138575739 | f | Zscan21 : Locus-Region | 2 | SNP | G | G | G | G | G | G | C | G | G | G | G | C | G | G | G | G | G | G | C/G | |
| rs50878719 MPD | dbSNP | MGI SNP Detail | Chr5:138575770 | f | Zscan21 : Locus-Region | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | ||||
| rs45961331 MPD | dbSNP | MGI SNP Detail | Chr5:138575786 | f | Zscan21 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C/T | ||||
| rs4225526 MPD | dbSNP | MGI SNP Detail | Chr5:138575831 | f | Zscan21 : Locus-Region | 1 | SNP | G | G | G | G | G | G | T | G | G/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/08/2013 MGI 5.13 |
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