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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Thra
thyroid hormone receptor alpha
MGI:98742

102 matching SNPs displayed
Full result set is also available in a tab-delimited format.


Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs27041067
MPD | dbSNP | MGI SNP Detail
Chr11:98738868f 1SNPAC  A AAAACCAAAAAA                               A/C
rs27041066
MPD | dbSNP | MGI SNP Detail
Chr11:98739037f 1SNPTT  T TTTTCCTTTTTT                               C/T
rs27041065
MPD | dbSNP | MGI SNP Detail
Chr11:98739098f 1SNPCA  C CCCCAACCCCCC                               A/C
rs27041064
MPD | dbSNP | MGI SNP Detail
Chr11:98739202f 1SNPCC  C CCCCTTCCCCCC                               C/T
rs29466889
MPD | dbSNP | MGI SNP Detail
Chr11:98739581f 2SNPA G     G         A                              A/G
rs52416518
MPD | dbSNP | MGI SNP Detail
Chr11:98740843f 1SNPG       A                                        A/G
rs253544365
MPD | dbSNP | MGI SNP Detail
Chr11:98740899f 1SNP                   TC                            C/T
rs222260331
MPD | dbSNP | MGI SNP Detail
Chr11:98743158f 1SNP                   TG                            G/T
rs52248794
MPD | dbSNP | MGI SNP Detail
Chr11:98743274f 2SNPG                 GGA                            A/G
rs27041063
MPD | dbSNP | MGI SNP Detail
Chr11:98743534f 1SNPT     TT TCCT T T                                C/T
rs49202045
MPD | dbSNP | MGI SNP Detail
Chr11:98743559f 2SNPG       A         GGA                            A/G
rs27041062
MPD | dbSNP | MGI SNP Detail
Chr11:98744000f 1SNPT      T TCTT T T                                C/T
rs27041061
MPD | dbSNP | MGI SNP Detail
Chr11:98744104f 1SNPC      C CGGC C C                                C/G
rs27041060
MPD | dbSNP | MGI SNP Detail
Chr11:98744210f 1SNP      GAGAAAAGA AG                               A/G
rs27041059
MPD | dbSNP | MGI SNP Detail
Chr11:98745022f 1SNP       T TCC  T T                                C/T
rs27041058
MPD | dbSNP | MGI SNP Detail
Chr11:98745419f 3SNPC T   TCTCCCC C C C                              C/T
rs29401708
MPD | dbSNP | MGI SNP Detail
Chr11:98745706f 2SNPG A     A   G     G                              A/G
rs50229102
MPD | dbSNP | MGI SNP Detail
Chr11:98746546f 1SNP        G         C                              C/G
rs49522775
MPD | dbSNP | MGI SNP Detail
Chr11:98746550f 1SNP        C         T                              C/T
rs27041057
MPD | dbSNP | MGI SNP Detail
Chr11:98747169f 1SNPG     GG GTTG G G                                G/T
rs29445158
MPD | dbSNP | MGI SNP Detail
Chr11:98747738f 1SNPA       T                                        A/T
rs29456919
MPD | dbSNP | MGI SNP Detail
Chr11:98747740f 1SNPA       T                                        A/T
rs29415430
MPD | dbSNP | MGI SNP Detail
Chr11:98747742f 1SNPA       T                                        A/T
rs219817896
MPD | dbSNP | MGI SNP Detail
Chr11:98748275f 1SNP                   CA                            A/C
rs29469228
MPD | dbSNP | MGI SNP Detail
Chr11:98748563f 2SNPT C         T     T                              C/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs27041056
MPD | dbSNP | MGI SNP Detail
Chr11:98749009f 1SNPC      C CCTC C C                                C/T
rs29405620
MPD | dbSNP | MGI SNP Detail
Chr11:98749713f 2SNPG A     A         G                              A/G
rs29420374
MPD | dbSNP | MGI SNP Detail
Chr11:98749715f 3SNPG A     G         GGA                            A/G
rs27041055
MPD | dbSNP | MGI SNP Detail
Chr11:98750425f 1SNPG      G GAAG G G                                A/G
rs27041054
MPD | dbSNP | MGI SNP Detail
Chr11:98751171f 1SNP       T TC T T T                                C/T
rs257242642
MPD | dbSNP | MGI SNP Detail
Chr11:98751418f 1SNP                   TC                            C/T
rs27041053
MPD | dbSNP | MGI SNP Detail
Chr11:98751567f 1SNPG      G GAAG G G                                A/G
rs27041052
MPD | dbSNP | MGI SNP Detail
Chr11:98752411f 1SNPC      C CTTC C C                                C/T
rs27041051
MPD | dbSNP | MGI SNP Detail
Chr11:98752795f 1SNP       G T T  G                                  G/T
rs29434652
MPD | dbSNP | MGI SNP Detail
Chr11:98752849f 2SNPA       C         A                              A/C
rs27041050
MPD | dbSNP | MGI SNP Detail
Chr11:98753005f 1SNPA      A AGGA A A                                A/G
rs29482341
MPD | dbSNP | MGI SNP Detail
Chr11:98753085f 2SNPC A     A   C     C                              A/C
rs227797764
MPD | dbSNP | MGI SNP Detail
Chr11:98753180f 1SNP                   TC                            C/T
rs240178594
MPD | dbSNP | MGI SNP Detail
Chr11:98753371f 1SNP                   AC                            A/C
rs27041049
MPD | dbSNP | MGI SNP Detail
Chr11:98754014f 1SNPC   C CCCCGGCCCCCC                               C/G
rs27041048
MPD | dbSNP | MGI SNP Detail
Chr11:98754279f 1SNP    C C C CC C C T                               C/T
rs27041047
MPD | dbSNP | MGI SNP Detail
Chr11:98754370f 1SNP    T T T CC T T T                               C/T
rs29471575
MPD | dbSNP | MGI SNP Detail
Chr11:98754628f 2SNP  C     C   T     T                              C/T
rs29398054
MPD | dbSNP | MGI SNP Detail
Chr11:98754884f 2SNPG T     T   G     G                              G/T
rs29478177
MPD | dbSNP | MGI SNP Detail
Chr11:98755001f 2SNPG A     A   G     G                              A/G
rs27041046
MPD | dbSNP | MGI SNP Detail
Chr11:98755014f 1SNP      C C TT C C C                               C/T
rs27041045
MPD | dbSNP | MGI SNP Detail
Chr11:98755200f 1SNP    A A A GG A A A                               A/G
rs107683923
MPD | dbSNP | MGI SNP Detail
Chr11:98755322f 1SNPC       T                                        C/T
rs108783043
MPD | dbSNP | MGI SNP Detail
Chr11:98755333f 1SNPG                                                G
rs27041044
MPD | dbSNP | MGI SNP Detail
Chr11:98755510f 1SNP    T T T AA T T T                               A/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs46207913
MPD | dbSNP | MGI SNP Detail
Chr11:98755613f 1SNPC       G                                        C/G
rs27041043
MPD | dbSNP | MGI SNP Detail
Chr11:98755744f 1SNP    G G G AA G G G                               A/G
rs29419664
MPD | dbSNP | MGI SNP Detail
Chr11:98755765f 2SNPA G     G         A                              A/G
rs29394097
MPD | dbSNP | MGI SNP Detail
Chr11:98755925f 2SNPA G     G         A                              A/G
rs6223741
MPD | dbSNP | MGI SNP Detail
Chr11:98756072f 2SNP  T T T T CC T T T           C                   C/T
rs6224353
MPD | dbSNP | MGI SNP Detail
Chr11:98756195f 1SNP  T                          C                   C/T
rs6224369
MPD | dbSNP | MGI SNP Detail
Chr11:98756205f 3SNPC T     T         C          C                   C/T
rs6224778
MPD | dbSNP | MGI SNP Detail
Chr11:98756211f 1SNP  T                          C                   C/T
rs6225326
MPD | dbSNP | MGI SNP Detail
Chr11:98756316f 2SNP  G G G G AA G G G           A                   A/G
rs27041042
MPD | dbSNP | MGI SNP Detail
Chr11:98756463f 1SNP    T T T GG T T T                               G/T
rs29475896
MPD | dbSNP | MGI SNP Detail
Chr11:98756506f 2SNPT C     C                                        C/T
rs27041041
MPD | dbSNP | MGI SNP Detail
Chr11:98756670f 1SNP    T T T GG T T T                               G/T
rs27041040
MPD | dbSNP | MGI SNP Detail
Chr11:98757064f 1SNP    T T T CC T T T                               C/T
rs27041039
MPD | dbSNP | MGI SNP Detail
Chr11:98757156f 1SNP    G G G CC G G G                               C/G
rs29452260
MPD | dbSNP | MGI SNP Detail
Chr11:98757333f 2SNPA G     G         A                              A/G
rs29385691
MPD | dbSNP | MGI SNP Detail
Chr11:98757552f 2SNPT C     C   T     T                              C/T
rs27041038
MPD | dbSNP | MGI SNP Detail
Chr11:98757754f 1SNP    A A A GG A A A                               A/G
rs29450522
MPD | dbSNP | MGI SNP Detail
Chr11:98758117f 2SNPT C     C   T     T                              C/T
rs27041037
MPD | dbSNP | MGI SNP Detail
Chr11:98759272f 2SNPA     G G AA G G GA                              A/G
rs27041036
MPD | dbSNP | MGI SNP Detail
Chr11:98759463f 2SNPG   C C C GG C C C                               C/G
rs52281485
MPD | dbSNP | MGI SNP Detail
Chr11:98759733f 1SNPT       A                                        A/T
rs52383549
MPD | dbSNP | MGI SNP Detail
Chr11:98759756f 1SNPT       A                                        A/T
rs46991959
MPD | dbSNP | MGI SNP Detail
Chr11:98760005f 1SNPT       C                                        C/T
rs52051063
MPD | dbSNP | MGI SNP Detail
Chr11:98760074f 1SNPT       C         T                              C/T
rs50997008
MPD | dbSNP | MGI SNP Detail
Chr11:98760529f 1SNPA       G                                        A/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs29469630
MPD | dbSNP | MGI SNP Detail
Chr11:98760704f 2SNPT       G   T     T                              G/T
rs29476584
MPD | dbSNP | MGI SNP Detail
Chr11:98761087f 2SNPT C     C   T     T                              C/T
rs52241812
MPD | dbSNP | MGI SNP Detail
Chr11:98761201f 1SNPT       T         A                              A/T
rs29407796
MPD | dbSNP | MGI SNP Detail
Chr11:98761561f 2SNPC T     T   C     C                              C/T
rs29459359
MPD | dbSNP | MGI SNP Detail
Chr11:98762210f 2SNPA G     G   A     A                              A/G
rs3660929
MPD | dbSNP | MGI SNP Detail
Chr11:98762664f 3SNPT C     C   T     T                              C/T
rs13481180
MPD | dbSNP | MGI SNP Detail
Chr11:98763660f 4SNPGGAAAGAGAGGGGAGAGAGAAGAGAAAAAGGAAAGGAGAGGAGGAAGAGA/G
rs27041035
MPD | dbSNP | MGI SNP Detail
Chr11:98763941f 4SNPC   T C T CC   T CCCT                            C/T
rs27041034
MPD | dbSNP | MGI SNP Detail
Chr11:98764267f 1SNPGC  G GGGGGGGGGGGG                               C/G
rs27041033
MPD | dbSNP | MGI SNP Detail
Chr11:98765080f 1SNPA   A AAAAGG AAAA                                A/G
rs52537747
MPD | dbSNP | MGI SNP Detail
Chr11:98765331f 1SNP        G                                        G
rs27041032
MPD | dbSNP | MGI SNP Detail
Chr11:98766637f 1SNPCC    CCCCCTCCCCCC                               C/T
rs47268501
MPD | dbSNP | MGI SNP Detail
Chr11:98767391f 1SNPT       C                                        C/T
rs233087842
MPD | dbSNP | MGI SNP Detail
Chr11:98767860f 1SNP                   AC                            A/C
rs254088376
MPD | dbSNP | MGI SNP Detail
Chr11:98768546f 1SNP                   AG                            A/G
rs27041031
MPD | dbSNP | MGI SNP Detail
Chr11:98768600f 3SNPAG      G AGA   A A                              A/G
rs27041030
MPD | dbSNP | MGI SNP Detail
Chr11:98769007f 1SNPCC    CCCCCTCCCCC                                C/T
rs27041029
MPD | dbSNP | MGI SNP Detail
Chr11:98769146f 1SNPCT  C CCCCCCCCCCCC                               C/T
rs211887638
MPD | dbSNP | MGI SNP Detail
Chr11:98769170f 1SNP                   AG                            A/G
rs27041028
MPD | dbSNP | MGI SNP Detail
Chr11:98769566f 1SNPCC  C CCCCTCCCCCC                                C/T
rs27041027
MPD | dbSNP | MGI SNP Detail
Chr11:98769660f 3SNPGCC   CGCGCC CGCG G                              C/G
rs27041026
MPD | dbSNP | MGI SNP Detail
Chr11:98769697f 1SNPGA  G GGGG GGGGGGG                               A/G
rs27041025
MPD | dbSNP | MGI SNP Detail
Chr11:98769942f 1SNPAG  A AAAAAA  AAAA                               A/G
rs27041024
MPD | dbSNP | MGI SNP Detail
Chr11:98770216f 1SNPCC  C TCCCCCCCCCCC                               C/T
rs27041023
MPD | dbSNP | MGI SNP Detail
Chr11:98770374f 1SNPCC  C CCCCCTCCCCCC                               C/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs27041022
MPD | dbSNP | MGI SNP Detail
Chr11:98770458f 1SNPTC  T TTTTTTTTTTTT                               C/T
rs27041021
MPD | dbSNP | MGI SNP Detail
Chr11:98770482f 1SNPAG  A AAAAAAAAAAAA                               A/G

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last database update
04/19/2016
MGI 6.03
The Jackson Laboratory