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Mouse SNPs
Query Results -- Summary
 Symbol
Name
ID
Rara
retinoic acid receptor, alpha
MGI:97856

120 matching SNPs displayed
Full result set is also available in a tab-delimited format.
Include SNPs that map to multiple locations

Legend
 Results are sorted by chromosome/coordinate value. Chromosome transitions are marked by blank rows.
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs27026048
MPD | dbSNP | MGI SNP Detail
Chr11:98926216f 1SNPGG GAGG GGGGG G                 A/G
rs27026047
MPD | dbSNP | MGI SNP Detail
Chr11:98926813f 1SNPGA GGGG  AG G G                 A/G
rs27026046
MPD | dbSNP | MGI SNP Detail
Chr11:98928088f 1SNPGG GGGG CCGGG G                 C/G
rs232256483
MPD | dbSNP | MGI SNP Detail
Chr11:98929297f 1SNP                 CT             C/T
rs27026045
MPD | dbSNP | MGI SNP Detail
Chr11:98929381f 1SNPT  TTTTTCCTTTTTT                C/T
rs27026044
MPD | dbSNP | MGI SNP Detail
Chr11:98929384f 1SNPAG  AAAA  AAAAAA                A/G
rs27026043
MPD | dbSNP | MGI SNP Detail
Chr11:98929585f 1SNPCC CCCCCTTCCCCCC                C/T
rs27026042
MPD | dbSNP | MGI SNP Detail
Chr11:98929664f 1SNPGC GCGGCCCGGGCGC                C/G
rs27026041
MPD | dbSNP | MGI SNP Detail
Chr11:98929696f 1SNPTC TCTTCCCTTTCTC                C/T
rs27026040
MPD | dbSNP | MGI SNP Detail
Chr11:98929885f 1SNPCT CCCCCCCCCCCCC                C/T
rs27026039
MPD | dbSNP | MGI SNP Detail
Chr11:98929941f 1SNPAG AGAAGGGAAAGAG                A/G
rs27026038
MPD | dbSNP | MGI SNP Detail
Chr11:98929981f 1SNPC  CCCCCTTCCCCCC                C/T
rs27026037
MPD | dbSNP | MGI SNP Detail
Chr11:98930597f 1SNPCC CCCCCCTCCCCCC                C/T
rs27026036
MPD | dbSNP | MGI SNP Detail
Chr11:98930750f 1SNPCT CTCCT  CCCTCT                C/T
rs27026035
MPD | dbSNP | MGI SNP Detail
Chr11:98930786f 2SNPT  TCTTCCCTTTCTC CT             C/T
rs27026034
MPD | dbSNP | MGI SNP Detail
Chr11:98931590f 1SNPGG GAGGGGGGGGGGG                A/G
rs27026033
MPD | dbSNP | MGI SNP Detail
Chr11:98932451f 1SNPGG GGGGGCCGGGGGG                C/G
rs29473897
MPD | dbSNP | MGI SNP Detail
Chr11:98935559f 2SNPA G   G   A                     A/G
rs215409962
MPD | dbSNP | MGI SNP Detail
Chr11:98946267f 1SNP                 TC             C/T
rs16808254
MPD | dbSNP | MGI SNP Detail
Chr11:98948284r 1SNPAAAAAAA          AAGAAAAAAAAAAAAA/G
rs16808253
MPD | dbSNP | MGI SNP Detail
Chr11:98948404r 1SNPTCTTTTT          TTTTTTTTTTTTTTCC/T
rs16808251
MPD | dbSNP | MGI SNP Detail
Chr11:98948409r 2Mixed-??----          --?-----------?-/G/T
rs16808250
MPD | dbSNP | MGI SNP Detail
Chr11:98948442r 1SNPCCCCCCC          CCTCCCCCCCCCCCCC/T
rs16808249
MPD | dbSNP | MGI SNP Detail
Chr11:98948475r 1SNPCCCCCCC          CCTCCCCCCCCCCCCC/T
rs16808248
MPD | dbSNP | MGI SNP Detail
Chr11:98948482r 1SNPCTCCCCC          CCCCCCCCCCCCCCTC/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs16808247
MPD | dbSNP | MGI SNP Detail
Chr11:98948567r 1SNPGGGGGGG          GGAGGGGGGGGGGGGA/G
rs16808246
MPD | dbSNP | MGI SNP Detail
Chr11:98948750r 1SNPGGGGGGG          GGGGGGGGGGGGGGAA/G
rs16808255
MPD | dbSNP | MGI SNP Detail
Chr11:98948910f 1SNPCCCCCCC          CCTCCCCCCCCCCCCC/T
rs49270128
MPD | dbSNP | MGI SNP Detail
Chr11:98948960f 1SNPG     T         G               G/T
rs16808256
MPD | dbSNP | MGI SNP Detail
Chr11:98948986f 1SNPCCCCCC           CCCCCCCC CCC  TC/T
rs16808257
MPD | dbSNP | MGI SNP Detail
Chr11:98948999f 1SNPCCCCAC           CCCCCCCC CCC CCA/C
rs16808258
MPD | dbSNP | MGI SNP Detail
Chr11:98949037f 1SNP    G A            G  G GAG  AA A/G
rs16808259
MPD | dbSNP | MGI SNP Detail
Chr11:98949044f 1SNPCCCCCCC          CCTCCCCCCCCCCCCC/T
rs16808260
MPD | dbSNP | MGI SNP Detail
Chr11:98949059f 1SNP    G A            G  G  AG  AA A/G
rs16808261
MPD | dbSNP | MGI SNP Detail
Chr11:98949094f 1SNPAAAAAAA          AATAAAAAAAAAAATA/T
rs16808262
MPD | dbSNP | MGI SNP Detail
Chr11:98949101f 1SNPCCCCCCC          CCTCCCCCCCCCCCCC/T
rs16808263
MPD | dbSNP | MGI SNP Detail
Chr11:98949102f 1SNPCGCCCCC          CCGCCCCCCCCCCCCC/G
rs16808264
MPD | dbSNP | MGI SNP Detail
Chr11:98949119f 1SNPGGGGGGG          GGAGGGGG GGG GGA/G
rs16808265
MPD | dbSNP | MGI SNP Detail
Chr11:98949138f 1SNP    G              G  G GAG  AA A/G
rs16808266
MPD | dbSNP | MGI SNP Detail
Chr11:98949143f 1SNP    G              G  G  AG  AA A/G
rs16808267
MPD | dbSNP | MGI SNP Detail
Chr11:98949151f 1SNPGTGGGGG          GGTGGGGGGGGGGGTG/T
rs16808268
MPD | dbSNP | MGI SNP Detail
Chr11:98949154f 1SNP  A G              G  G  AG  AA A/G
rs16808269
MPD | dbSNP | MGI SNP Detail
Chr11:98949180f 1SNPCCCCCCC          CCTCCCCCCCCCCCCC/T
rs16808270
MPD | dbSNP | MGI SNP Detail
Chr11:98949199f 1SNPTTTTTT           TTTTTTTT TTT  CC/T
rs16808271
MPD | dbSNP | MGI SNP Detail
Chr11:98949228f 1IN-DEL-T-----          ------T------- -/T
rs16808275
MPD | dbSNP | MGI SNP Detail
Chr11:98949454f 1SNPGG GGGG          GGGGGGAG GGGGGGA/G
rs16808276
MPD | dbSNP | MGI SNP Detail
Chr11:98949472f 1SNPTTTTTTT          TTCTTTTT TTTTTTC/T
rs16808277
MPD | dbSNP | MGI SNP Detail
Chr11:98949513f 1SNPGGGGGGG          GGAGGGGGGGGGGGGA/G
rs16808278
MPD | dbSNP | MGI SNP Detail
Chr11:98949517f 1SNPCCCCCCC          CCTCCCCCCCCCCCCC/T
rs16808279
MPD | dbSNP | MGI SNP Detail
Chr11:98949570f 1SNPGAGGGGG          GG GGGGGGGGGGGAA/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs16808280
MPD | dbSNP | MGI SNP Detail
Chr11:98949836f 1SNPGAGGGGG          GGGGGGGGGGGGGGAA/G
rs16808281
MPD | dbSNP | MGI SNP Detail
Chr11:98949884f 1SNPGGGGAGG          GGGGGAGGGAGGGGGA/G
rs16808283
MPD | dbSNP | MGI SNP Detail
Chr11:98949913f 1SNPCCCCCCC          CCTCCCCCCCCCCCCC/T
rs16808284
MPD | dbSNP | MGI SNP Detail
Chr11:98950610f 1SNPTT TTTT          TTCTTTTTTTTTTTTC/T
rs16808285
MPD | dbSNP | MGI SNP Detail
Chr11:98950701f 1SNPTTTTTTT          TTCTTTTTTTTTTTTC/T
rs16808286
MPD | dbSNP | MGI SNP Detail
Chr11:98950705f 1SNPCCCCCCC          CCTCCCCCCCCCCCCC/T
rs16808287
MPD | dbSNP | MGI SNP Detail
Chr11:98950719f 1SNPAAAAAAA          AAGAAAAAAAAAAAAA/G
rs16808288
MPD | dbSNP | MGI SNP Detail
Chr11:98950734f 1SNPCCCCCCC          CCTCCCCCCCCCCCCC/T
rs16808289
MPD | dbSNP | MGI SNP Detail
Chr11:98950862f 1SNPCTCCCCC          CCCCCCCCCCCCCCCC/T
rs16808290
MPD | dbSNP | MGI SNP Detail
Chr11:98950953f 1SNPGGGGGGG          GGAGGGGGGGGGGGGA/G
rs16808291
MPD | dbSNP | MGI SNP Detail
Chr11:98951006f 1SNPTTTTTTT          TTCTTTTTTTTTTTTC/T
rs16808292
MPD | dbSNP | MGI SNP Detail
Chr11:98951049f 1SNPTTTTTTT          TTCTTTTTTTTTTTTC/T
rs49827673
MPD | dbSNP | MGI SNP Detail
Chr11:98952392f 1SNPG     G         G               G
rs16808293
MPD | dbSNP | MGI SNP Detail
Chr11:98965964f 1IN-DEL-A-----          -- -------------/A
rs16808294
MPD | dbSNP | MGI SNP Detail
Chr11:98966234f 2SNPCCCCCCCC T    CC CC CCCCCCCCCCCTC/T
rs29478907
MPD | dbSNP | MGI SNP Detail
Chr11:98966477f 2SNPT     C         T               C/T
rs16808295
MPD | dbSNP | MGI SNP Detail
Chr11:98966527f 1SNPAAAA AA          AAGAAAAAAAAAAAAA/G
rs16808296
MPD | dbSNP | MGI SNP Detail
Chr11:98966643f 1SNPAGAAGAA          AAGAAGGAAGAAAAGA/G
rs16808297
MPD | dbSNP | MGI SNP Detail
Chr11:98967630f 1SNPGGGGGGG          GGCGGGGGGGGGGGGC/G
rs16808298
MPD | dbSNP | MGI SNP Detail
Chr11:98967644f 1SNPAGAAAAA          AAGAAAAAAAAAAAGA/G
rs16808299
MPD | dbSNP | MGI SNP Detail
Chr11:98967648f 1SNPCCCCCCC          CCACCCCCCCCCCCCA/C
rs16808300
MPD | dbSNP | MGI SNP Detail
Chr11:98967688f 1SNPCCCCCCC          CCTCCCCCCCCCCCCC/T
rs16808301
MPD | dbSNP | MGI SNP Detail
Chr11:98967689f 1SNPTTTTT T          TTGTTTTTTTTTTTTG/T
rs16808302
MPD | dbSNP | MGI SNP Detail
Chr11:98967747f 1SNPGGGGGGG          GGTGGGGGGGGGGGGG/T
rs16808303
MPD | dbSNP | MGI SNP Detail
Chr11:98967862f 1SNPGG GGG           G G     G G G TG/T
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs16808304
MPD | dbSNP | MGI SNP Detail
Chr11:98967888f 1SNPGGGGGGG          GGGGGGGGGGGGGGAA/G
rs16808305
MPD | dbSNP | MGI SNP Detail
Chr11:98967895f 2SNPTCTTCTT          CTCTTCCTTCTTTTCC/T
rs16808306
MPD | dbSNP | MGI SNP Detail
Chr11:98968030f 1SNPTCTTTTT          TTTTTTTTTTTTTTCC/T
rs16808307
MPD | dbSNP | MGI SNP Detail
Chr11:98968161f 1SNPTTTTTTT          TTCTTTTTTTTTTTTC/T
rs16808308
MPD | dbSNP | MGI SNP Detail
Chr11:98968167f 1SNPCC CCCC          CCACCCCCCCCCC CA/C
rs16808309
MPD | dbSNP | MGI SNP Detail
Chr11:98968231f 1SNPCTCCCCC          CCCCCCCCCCCCCCCC/T
rs16808310
MPD | dbSNP | MGI SNP Detail
Chr11:98968404f 1SNPGGGGGGG          GGAGGGGGGGGGGGGA/G
rs16808311
MPD | dbSNP | MGI SNP Detail
Chr11:98968450f 1SNPTTTTTTT          TTATTT TTTTTTTTA/T
rs16808312
MPD | dbSNP | MGI SNP Detail
Chr11:98969974f 1SNPCCCCCCC          CCGCCCCCCCCCCCCC/G
rs16808313
MPD | dbSNP | MGI SNP Detail
Chr11:98969979f 1SNPAAAAAAA          AAGAAAAAAAAAAAAA/G
rs16808314
MPD | dbSNP | MGI SNP Detail
Chr11:98970230f 1SNPGGGGGGG          GGCGGGGGGGGGGGTC/G/T
rs16808315
MPD | dbSNP | MGI SNP Detail
Chr11:98970682f 1SNPCCCCCCC          CCTCCCCCCCCCCCCC/T
rs16808316
MPD | dbSNP | MGI SNP Detail
Chr11:98970703f 1SNPCCCCCCC          CCTCCCCCCCCCCCCC/T
rs16808317
MPD | dbSNP | MGI SNP Detail
Chr11:98970760f 1SNPGGGGGGG          GGGGGGGGGGGGGGAA/G
rs16808318
MPD | dbSNP | MGI SNP Detail
Chr11:98970766f 1SNPAAAAAAA          AAGAAAAAAAAAAAAA/G
rs16808319
MPD | dbSNP | MGI SNP Detail
Chr11:98970777f 1MixedC-CCCCC          CCCCCCCCCCCCCCT-/C/T
rs16808320
MPD | dbSNP | MGI SNP Detail
Chr11:98970870f 1SNPAAAAAAA          AAGAAAAAAAAAAAAA/G
rs16808321
MPD | dbSNP | MGI SNP Detail
Chr11:98970892f 1IN-DELCCCCCCC          CC-CCCCCCCCCCCC-/C
rs16808322
MPD | dbSNP | MGI SNP Detail
Chr11:98970893f 1IN-DELAAAAAAA          AA-AAAAAAAAAAAA-/A
rs16808323
MPD | dbSNP | MGI SNP Detail
Chr11:98970903f 2Mixed-------          --?-------------/A/T
rs16808325
MPD | dbSNP | MGI SNP Detail
Chr11:98970992f 5Mixed???????          ??A????????????-/A/C/G/T
rs16808330
MPD | dbSNP | MGI SNP Detail
Chr11:98971007f 1SNPAAAAAAA          AATAAAAAAAAAAAAA/T
rs16808331
MPD | dbSNP | MGI SNP Detail
Chr11:98971014f 1SNPGGGGGGG          GGAGGGGGGGGGGGGA/G
rs16808332
MPD | dbSNP | MGI SNP Detail
Chr11:98971098f 1SNPTTTTTTT          TTGTTTTTTTTTTTTG/T
rs16808333
MPD | dbSNP | MGI SNP Detail
Chr11:98971104f 1SNPAAAAAAA          AAGAAAAAAAAAAAAA/G
SNP ID
(dbSNP Build 142)
Map Position
(GRCm38)
Gene : dbSNP Function ClassAssays
(ss)
Variation
Type
Allele
Summary
(all strains)
rs16808334
MPD | dbSNP | MGI SNP Detail
Chr11:98971147f 1SNPTTTTTTT          TTCTTTTTTTTTTTTC/T
rs16808335
MPD | dbSNP | MGI SNP Detail
Chr11:98971155f 1SNPGGGGGGG          GGCGGGGGGGGGGGGC/G
rs27026032
MPD | dbSNP | MGI SNP Detail
Chr11:98971227f 1SNP    G  GCC                      C/G
rs16808336
MPD | dbSNP | MGI SNP Detail
Chr11:98971338f 1SNPCCCCCCC          CCGCCCCCCCCCCCCC/G
rs16808337
MPD | dbSNP | MGI SNP Detail
Chr11:98971353f 1SNPTCTTTTT          TTCTTTTTTTTTTTCC/T
rs16808338
MPD | dbSNP | MGI SNP Detail
Chr11:98971500f 1SNPGGGGGGG          GGAGGGGGGGGGGGGA/G
rs16808339
MPD | dbSNP | MGI SNP Detail
Chr11:98971925f 1SNPGG GG G            A G   GGG   GA/G
rs16808340
MPD | dbSNP | MGI SNP Detail
Chr11:98971966f 1SNPCT  C C           CT C  CCCC C TC/T
rs16808341
MPD | dbSNP | MGI SNP Detail
Chr11:98972137f 1SNPAAAAAAA          AAGAAA AAAAAAAAA/G
rs16808342
MPD | dbSNP | MGI SNP Detail
Chr11:98972153f 11Mixed-------          --A--- ---------/A/C/G/T
rs16808353
MPD | dbSNP | MGI SNP Detail
Chr11:98972193f 1SNPGGGGGGG          GGTGGG GGGGGGGGG/T
rs16808354
MPD | dbSNP | MGI SNP Detail
Chr11:98972367f 1SNPAAAAAAA          AAGAAA AAAAAAAAA/G
rs16808355
MPD | dbSNP | MGI SNP Detail
Chr11:98972507f 1SNPCCCCCCC          CCTCCCCCCCCCCCCC/T
rs16808356
MPD | dbSNP | MGI SNP Detail
Chr11:98972717f 1SNPCCCCCCC          CCCCCCCCCCCCCCTC/T
rs16808357
MPD | dbSNP | MGI SNP Detail
Chr11:98972725f 1SNPCCCCCCC          CCCCCCCCCCCCCCTC/T
rs16808358
MPD | dbSNP | MGI SNP Detail
Chr11:98972787f 1SNPCTCCCCC          CCACCCCCCCCCCCAA/C/T
rs16808359
MPD | dbSNP | MGI SNP Detail
Chr11:98972798f 1SNPCTCCCCC          CCCCCCCCCCCCCCTC/T
rs16808360
MPD | dbSNP | MGI SNP Detail
Chr11:98972895f 1SNPCCCCCCC          CCTCCCCCCCCCCCCC/T
rs16808361
MPD | dbSNP | MGI SNP Detail
Chr11:98972897f 1SNPTCTTTTT          TTTTTTTTTTTTTTCC/T
rs16808362
MPD | dbSNP | MGI SNP Detail
Chr11:98972939f 1SNPTTTTTTT          TTTTTTTTTTTTTTGG/T

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last database update
06/15/2016
MGI 6.04
The Jackson Laboratory