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Genome
Coordinate Discrepancy The genome coordinates for mouse SNPs are derived from a different NCBI build of the mouse genome than are the genome coordinates for MGI genes. (see details). |
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Symbol Name ID |
Ptgs1 prostaglandin-endoperoxide synthase 1 MGI:97797 |
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) |  | Gene : dbSNP Function Class | Assays (ss) | Variation Type |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | Allele Summary (all strains) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| rs27159781 MPD | dbSNP | MGI SNP Detail | Chr2:36084357 | f | Ptgs1 : Locus-Region | 1 | SNP | G | G | G | G | C | G | G | G | G | G | G | G | C/G | |||||||||||
| rs6269861 MPD | dbSNP | MGI SNP Detail | Chr2:36084786 | f | Ptgs1 : Locus-Region | 2 | SNP | C | C | C | C | C | C | G | C | C | C | C | C | C | G | C | C/G | ||||||||
| rs27159780 MPD | dbSNP | MGI SNP Detail | Chr2:36084798 | f | Ptgs1 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C | C | C/T | ||||||||||
| rs27159779 MPD | dbSNP | MGI SNP Detail | Chr2:36084915 | f | Ptgs1 : Locus-Region | 1 | SNP | T | T | T | T | A | T | T | T | T | T | T | T | A/T | |||||||||||
| rs27159778 MPD | dbSNP | MGI SNP Detail | Chr2:36085555 | f | Ptgs1 : Locus-Region | 1 | SNP | T | T | T | T | C | T | T | T | T | T | T | T | C/T | |||||||||||
| rs27159777 MPD | dbSNP | MGI SNP Detail | Chr2:36085607 | f | Ptgs1 : Locus-Region | 1 | SNP | G | G | G | G | T | G | G | G | G | G | G | G | G/T | |||||||||||
| rs27159776 MPD | dbSNP | MGI SNP Detail | Chr2:36085915 | f | Ptgs1 : Locus-Region | 1 | SNP | T | T | T | T | T | A | T | T | T | T | T | T | T | A/T | ||||||||||
| rs27159775 MPD | dbSNP | MGI SNP Detail | Chr2:36086539 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | G | C | C/G | ||||||||||
| rs27159774 MPD | dbSNP | MGI SNP Detail | Chr2:36087456 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | C | G | C | C | C | C | C | G | C | C/G | ||||||||||
| rs27159773 MPD | dbSNP | MGI SNP Detail | Chr2:36087696 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||||||||||
| rs27159772 MPD | dbSNP | MGI SNP Detail | Chr2:36087890 | f | Ptgs1 : Intron | 1 | SNP | T | T | T | T | T | G | T | T | T | T | T | T | T | G/T | ||||||||||
| rs27159771 MPD | dbSNP | MGI SNP Detail | Chr2:36090248 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | C | T | C | T | C | C | C | C | C/T | |||||||||||
| rs27159770 MPD | dbSNP | MGI SNP Detail | Chr2:36090329 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | C | G | C | C | C | C | C | C | C/G | |||||||||||
| rs27159769 MPD | dbSNP | MGI SNP Detail | Chr2:36090340 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | G | C | C/G | ||||||||||
| rs27159768 MPD | dbSNP | MGI SNP Detail | Chr2:36090625 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | A | G | A | A/G | ||||||||||
| rs27144167 MPD | dbSNP | MGI SNP Detail | Chr2:36090944 | f | Ptgs1 : Intron | 1 | SNP | G | G | G | G | G | G | G | C | G | G | G | G | G | C/G | ||||||||||
| rs33314402 MPD | dbSNP | MGI SNP Detail | Chr2:36091456 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | G | A | A/G | ||||||||||||||||||
| rs27144166 MPD | dbSNP | MGI SNP Detail | Chr2:36091504 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | ||||||||||
| rs27144165 MPD | dbSNP | MGI SNP Detail | Chr2:36091860 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C/T | ||||||||||
| rs27144164 MPD | dbSNP | MGI SNP Detail | Chr2:36092357 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | G | C | C/G | ||||||||||
| rs27144163 MPD | dbSNP | MGI SNP Detail | Chr2:36092710 | f | Ptgs1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | C/T | ||||||||||
| rs27144162 MPD | dbSNP | MGI SNP Detail | Chr2:36092785 | f | Ptgs1 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||||||||||
| rs8238803 MPD | dbSNP | MGI SNP Detail | Chr2:36092803 | f | Ptgs1 : Coding-Synonymous | 2 | SNP | T | T | T | T | T | T | T | C | T | T | T | T | C | T | T | T | T | T | T | T | C/T | |||
| rs8238804 MPD | dbSNP | MGI SNP Detail | Chr2:36092839 | f | Ptgs1 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | T | C | C | C/T | ||||||||||||||
| rs8238805 MPD | dbSNP | MGI SNP Detail | Chr2:36092854 | f | Ptgs1 : Intron | 1 | IN-DEL | - | - | - | - | - | C | - | C | - | - | - | -/C | ||||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs8238806 MPD | dbSNP | MGI SNP Detail | Chr2:36092857 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | T | C | C | C | C | C | C/T | |||||||||||||
| rs8238807 MPD | dbSNP | MGI SNP Detail | Chr2:36092913 | f | Ptgs1 : Intron | 3 | Mixed | - | - | - | - | - | - | - | T | - | - | - | -/C/T | ||||||||||||
| rs8238810 MPD | dbSNP | MGI SNP Detail | Chr2:36092944 | f | Ptgs1 : Intron | 2 | SNP | G | G | G | G | G | G | G | T | G | G | G | G | G | G | G | G | G | G | G | G | G/T | |||
| rs8238811 MPD | dbSNP | MGI SNP Detail | Chr2:36092976 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | A | A | T | A | T | A | A | A | A/T | ||||||||||||
| rs8238812 MPD | dbSNP | MGI SNP Detail | Chr2:36093061 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | A | A | A | A | T | A | A | A | A/T | ||||||||||||
| rs8238813 MPD | dbSNP | MGI SNP Detail | Chr2:36093287 | f | Ptgs1 : Coding-NonSynonymous | 1 | SNP | G | G | G | G | G | A | G | G | G | A/G | ||||||||||||||
| rs8238814 MPD | dbSNP | MGI SNP Detail | Chr2:36093458 | f | Ptgs1 : Intron | 3 | Mixed | - | - | - | - | - | ? | - | - | - | -/C/G/T | ||||||||||||||
| rs27144161 MPD | dbSNP | MGI SNP Detail | Chr2:36094185 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | A | A | A | A | G | A | A | A | A | A | A/G | ||||||||||
| rs27144160 MPD | dbSNP | MGI SNP Detail | Chr2:36094191 | f | Ptgs1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | T | C/T | ||||||||||
| rs27144159 MPD | dbSNP | MGI SNP Detail | Chr2:36094302 | f | Ptgs1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | C | T | C/T | ||||||||||
| rs27144158 MPD | dbSNP | MGI SNP Detail | Chr2:36094442 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | A | A | T | A | T | A | A | A | T | A | A/T | ||||||||||
| rs27144157 MPD | dbSNP | MGI SNP Detail | Chr2:36094854 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C/T | ||||||||||
| rs27144156 MPD | dbSNP | MGI SNP Detail | Chr2:36096007 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C/T | |||||||||||
| rs8238817 MPD | dbSNP | MGI SNP Detail | Chr2:36096306 | f | Ptgs1 : Intron | 1 | SNP | G | G | G | G | G | G | A | G | G | G | A/G | |||||||||||||
| rs8238818 MPD | dbSNP | MGI SNP Detail | Chr2:36096311 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | A | A | A | G | A | A | A | A/G | |||||||||||||
| rs8238819 MPD | dbSNP | MGI SNP Detail | Chr2:36096321 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | A | A | A | G | A | A | A | A/G | |||||||||||||
| rs8238820 MPD | dbSNP | MGI SNP Detail | Chr2:36096322 | f | Ptgs1 : Intron | 1 | IN-DEL | - | - | - | - | - | - | G | - | - | - | -/G | |||||||||||||
| rs8238821 MPD | dbSNP | MGI SNP Detail | Chr2:36096333 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | A | C | C | C | A/C | |||||||||||||||
| rs27144155 MPD | dbSNP | MGI SNP Detail | Chr2:36096751 | f | Ptgs1 : Intron | 2 | SNP | A | A | C | A | C | C | A | C | A | A | A | C | C | A/C | ||||||||||
| rs27144154 MPD | dbSNP | MGI SNP Detail | Chr2:36096757 | f | Ptgs1 : Intron | 1 | SNP | A | C | A | C | C | C | C | A/C | ||||||||||||||||
| rs27144153 MPD | dbSNP | MGI SNP Detail | Chr2:36097733 | f | Ptgs1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | C | T | C/T | |||||||||
| rs27144152 MPD | dbSNP | MGI SNP Detail | Chr2:36097777 | f | Ptgs1 : Intron | 1 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | A | G | A/G | |||||||||
| rs27144151 MPD | dbSNP | MGI SNP Detail | Chr2:36097869 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | T | A | A/T | |||||||||
| rs27144150 MPD | dbSNP | MGI SNP Detail | Chr2:36097988 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C/T | |||||||||
| rs27144149 MPD | dbSNP | MGI SNP Detail | Chr2:36098522 | f | Ptgs1 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C/T | |||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27144148 MPD | dbSNP | MGI SNP Detail | Chr2:36099239 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | T | C | C/T | |||||||||
| rs27144147 MPD | dbSNP | MGI SNP Detail | Chr2:36099250 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||||||||
| rs27144146 MPD | dbSNP | MGI SNP Detail | Chr2:36099731 | f | Ptgs1 : Intron | 1 | SNP | T | T | T | T | T | A | T | T | T | T | T | T | A | T | A/T | |||||||||
| rs27144145 MPD | dbSNP | MGI SNP Detail | Chr2:36099857 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | A | A | G | A | A | A | A | G | A | A/G | |||||||||||
| rs8238822 MPD | dbSNP | MGI SNP Detail | Chr2:36100686 | f | Ptgs1 : Coding-NonSynonymous | 1 | SNP | A | A | A | A | T | A | A | A/T | ||||||||||||||||
| rs4223124 MPD | dbSNP | MGI SNP Detail | Chr2:36100909 | f | Ptgs1 : Intron | 2 | SNP | T | T | T | T | T | T | C | T | T | T | T | T | T | T | C | T | C/T | |||||||
| rs4223125 MPD | dbSNP | MGI SNP Detail | Chr2:36101030 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | T | C | C | C/T | ||||||||||||||||
| rs4223126 MPD | dbSNP | MGI SNP Detail | Chr2:36101078 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | A | G | A | A | A/G | ||||||||||||||||
| rs27144144 MPD | dbSNP | MGI SNP Detail | Chr2:36101516 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | A | A | C | A | A | A | A | A | C | A | A/C | ||||||||||
| rs27144143 MPD | dbSNP | MGI SNP Detail | Chr2:36101640 | f | Ptgs1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A | G | G | G | A | G | A/G | |||||||||
| rs27144142 MPD | dbSNP | MGI SNP Detail | Chr2:36102290 | f | Ptgs1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | A | G | A/G | |||||||||
| rs27144141 MPD | dbSNP | MGI SNP Detail | Chr2:36102457 | f | Ptgs1 : Intron | 1 | SNP | G | G | G | G | G | G | G | A | G | G | G | G | A/G | |||||||||||
| rs27144140 MPD | dbSNP | MGI SNP Detail | Chr2:36102516 | f | Ptgs1 : Intron | 2 | SNP | A | A | T | A | A | A | A | A | A | A | A | A | A | A | A | A | A/T | |||||||
| rs27144139 MPD | dbSNP | MGI SNP Detail | Chr2:36104417 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | T | A | A/T | ||||||||||
| rs27144138 MPD | dbSNP | MGI SNP Detail | Chr2:36104562 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | |||||||||
| rs8238823 MPD | dbSNP | MGI SNP Detail | Chr2:36104818 | f | Ptgs1 : Intron | 5 | Mixed | - | - | - | - | G | G | - | - | -/A/G | |||||||||||||||
| rs8238828 MPD | dbSNP | MGI SNP Detail | Chr2:36104832 | f | Ptgs1 : Intron | 2 | SNP | A | A | A | A | A | A | A | G | A | A | A | A | G | A | A | A | A | A | A/G | |||||
| rs8238829 MPD | dbSNP | MGI SNP Detail | Chr2:36104839 | f | Ptgs1 : Intron | 1 | SNP | T | T | T | T | T | G | T | T | T | G/T | ||||||||||||||
| rs8238830 MPD | dbSNP | MGI SNP Detail | Chr2:36104850 | f | Ptgs1 : Intron | 1 | SNP | G | G | G | G | G | A | G | G | A/G | |||||||||||||||
| rs8238831 MPD | dbSNP | MGI SNP Detail | Chr2:36104957 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | C | A | A | A/C | |||||||||||||||||
| rs8238832 MPD | dbSNP | MGI SNP Detail | Chr2:36104959 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | A | T | T | A | A | A/T | |||||||||||||||
| rs27144137 MPD | dbSNP | MGI SNP Detail | Chr2:36105039 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | A | G | A | A/G | |||||||||
| rs8238833 MPD | dbSNP | MGI SNP Detail | Chr2:36105048 | f | Ptgs1 : Intron | 1 | IN-DEL | - | - | - | T | -/T | |||||||||||||||||||
| rs27144136 MPD | dbSNP | MGI SNP Detail | Chr2:36105943 | f | Ptgs1 : Intron | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | T | C | C/T | ||||||||||
| rs27144135 MPD | dbSNP | MGI SNP Detail | Chr2:36105976 | f | Ptgs1 : Intron | 1 | SNP | A | A | A | A | A | A | A | A | A | A | A | C | A | A/C | ||||||||||
| SNP ID (dbSNP Build 128) | Map Position (NCBI Build 37) | | Gene : dbSNP Function Class | Assays (ss) | Variation Type | | | | | | | | | | | | | | | | | | | | | | | | Allele Summary (all strains) |
| rs27144134 MPD | dbSNP | MGI SNP Detail | Chr2:36106170 | f | Ptgs1 : Intron | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | G | T | G/T | ||||||||||
| rs27144133 MPD | dbSNP | MGI SNP Detail | Chr2:36106357 | f | Ptgs1 : Intron | 1 | SNP | T | T | T | T | T | C | T | T | T | T | T | T | C | T | C/T | |||||||||
| rs8238834 MPD | dbSNP | MGI SNP Detail | Chr2:36106727 | f | Ptgs1 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | T | C | C | C | C/T | |||||||||||||
| rs8238835 MPD | dbSNP | MGI SNP Detail | Chr2:36106758 | f | Ptgs1 : Coding-Synonymous | 1 | SNP | C | C | C | C | C | C | C | T | C | C | C | C/T | ||||||||||||
| rs8238836 MPD | dbSNP | MGI SNP Detail | Chr2:36106916 | f | Ptgs1 : mRNA-UTR | 1 | SNP | T | T | T | T | T | G | T | T | G/T | |||||||||||||||
| rs8238837 MPD | dbSNP | MGI SNP Detail | Chr2:36106979 | f | Ptgs1 : mRNA-UTR | 1 | SNP | A | A | A | A | A | G | A | A | A/G | |||||||||||||||
| rs8238838 MPD | dbSNP | MGI SNP Detail | Chr2:36107062 | f | Ptgs1 : mRNA-UTR | 1 | SNP | A | A | A | A | A | G | A | A | A/G | |||||||||||||||
| rs8238839 MPD | dbSNP | MGI SNP Detail | Chr2:36107072 | f | Ptgs1 : mRNA-UTR | 1 | SNP | G | G | G | G | G | A | G | G | A/G | |||||||||||||||
| rs8238840 MPD | dbSNP | MGI SNP Detail | Chr2:36107404 | f | Ptgs1 : mRNA-UTR | 1 | SNP | G | G | A | A/G | ||||||||||||||||||||
| rs8238841 MPD | dbSNP | MGI SNP Detail | Chr2:36107515 | f | Ptgs1 : mRNA-UTR | 1 | SNP | G | A | G | A/G | ||||||||||||||||||||
| rs8238842 MPD | dbSNP | MGI SNP Detail | Chr2:36107546 | f | Ptgs1 : mRNA-UTR | 1 | SNP | T | G | T | G/T | ||||||||||||||||||||
| rs27144132 MPD | dbSNP | MGI SNP Detail | Chr2:36107819 | f | Ptgs1 : Locus-Region | 1 | SNP | A | A | A | A | A | C | A | A | A | A | A | C | A | A/C | ||||||||||
| rs27144131 MPD | dbSNP | MGI SNP Detail | Chr2:36107866 | f | Ptgs1 : Locus-Region | 1 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | C | T | C/T | |||||||||
| rs27144130 MPD | dbSNP | MGI SNP Detail | Chr2:36108122 | f | Ptgs1 : Locus-Region | 1 | SNP | G | G | G | G | G | A | G | G | G | G | G | G | A/G | |||||||||||
| rs27144129 MPD | dbSNP | MGI SNP Detail | Chr2:36108190 | f | Ptgs1 : Locus-Region | 1 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | A | C | A/C | |||||||||
| rs27144128 MPD | dbSNP | MGI SNP Detail | Chr2:36108197 | f | Ptgs1 : Locus-Region | 1 | SNP | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C/T |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc |
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last database update 05/22/2013 MGI 5.13 |
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